RNA–Protein interactions for RNA: ENST00000536011.5

RTN3-207, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-207ENST00000536011 GSG1LQ6UXU4 331 aa9.33□□□□□ -0.92
RTN3-207ENST00000536011 C15orf53Q8NAA6 179 aa9.33□□□□□ -0.92
RTN3-207ENST00000536011 ZBTB8BQ8NAP8 495 aaPredicted RBP9.33□□□□□ -0.92
RTN3-207ENST00000536011 MITD1Q8WV92 249 aa9.33□□□□□ -0.92
RTN3-207ENST00000536011 C17orf77Q96MU5 243 aa9.33□□□□□ -0.92
RTN3-207ENST00000536011 UHRF2Q96PU4 802 aa9.33□□□□□ -0.92
RTN3-207ENST00000536011 DNAH2Q9P225 4427 aa9.33□□□□□ -0.92
RTN3-207ENST00000536011 FAT2Q9NYQ8 4349 aa9.32□□□□□ -0.92
RTN3-207ENST00000536011 PKHD1P08F94 4074 aa9.32□□□□□ -0.92
RTN3-207ENST00000536011 L7N2F9 121 aa9.32□□□□□ -0.92
RTN3-207ENST00000536011 IL7P13232 177 aa9.32□□□□□ -0.92
RTN3-207ENST00000536011 CXCL3P19876 107 aa9.32□□□□□ -0.92
RTN3-207ENST00000536011 VAMP2P63027 116 aa9.32□□□□□ -0.92
RTN3-207ENST00000536011 HIST1H1AQ02539 215 aaPredicted RBP9.32□□□□□ -0.92
RTN3-207ENST00000536011 RAB31Q13636 194 aa9.32□□□□□ -0.92
RTN3-207ENST00000536011 PSG3Q16557 428 aa9.32□□□□□ -0.92
RTN3-207ENST00000536011 IGFL4Q6B9Z1 124 aa9.32□□□□□ -0.92
RTN3-207ENST00000536011 LCN15Q6UWW0 184 aa9.32□□□□□ -0.92
RTN3-207ENST00000536011 OR8A1Q8NGG7 326 aa9.32□□□□□ -0.92
RTN3-207ENST00000536011 ARV1Q9H2C2 271 aa9.32□□□□□ -0.92
RTN3-207ENST00000536011 CRXO43186 299 aaPredicted RBP9.31□□□□□ -0.92
RTN3-207ENST00000536011 COX7A2P2O60397 106 aa9.31□□□□□ -0.92
RTN3-207ENST00000536011 BTCP35070 178 aa9.31□□□□□ -0.92
RTN3-207ENST00000536011 FAM3BP58499 235 aaPredicted RBP9.31□□□□□ -0.92
RTN3-207ENST00000536011 SLC38A11Q08AI6 406 aa9.31□□□□□ -0.92
RTN3-207ENST00000536011 TMEM88Q6PEY1 159 aa9.31□□□□□ -0.92
RTN3-207ENST00000536011 BPIFA4PQ86YQ2 179 aa9.31□□□□□ -0.92
RTN3-207ENST00000536011 BAP18Q8IXM2 172 aa9.31□□□□□ -0.92
RTN3-207ENST00000536011 SLC50A1Q9BRV3 221 aa9.31□□□□□ -0.92
RTN3-207ENST00000536011 C20orf85Q9H1P6 137 aa9.31□□□□□ -0.92
RTN3-207ENST00000536011 RCL1Q9Y2P8 373 aaKnown RBP9.31□□□□□ -0.92
RTN3-207ENST00000536011 PRSS29PA6NIE9 313 aa9.3□□□□□ -0.92
RTN3-207ENST00000536011 ZNF705GA8MUZ8 300 aaPredicted RBP9.3□□□□□ -0.92
RTN3-207ENST00000536011 M0R2N4 97 aa9.3□□□□□ -0.92
RTN3-207ENST00000536011 AGPAT2O15120 278 aa9.3□□□□□ -0.92
RTN3-207ENST00000536011 CCNKO75909 580 aa9.3□□□□□ -0.92
RTN3-207ENST00000536011 MBPP02686 304 aaPredicted RBP9.3□□□□□ -0.92
RTN3-207ENST00000536011 TAS2R60P59551 318 aa9.3□□□□□ -0.92
RTN3-207ENST00000536011 LINC00305Q7Z4B0 112 aa9.3□□□□□ -0.92
RTN3-207ENST00000536011 RPUSD4Q96CM3 377 aaKnown RBP9.3□□□□□ -0.92
RTN3-207ENST00000536011 C16orf74Q96GX8 76 aa9.3□□□□□ -0.92
RTN3-207ENST00000536011 LINC01587Q99440 93 aa9.3□□□□□ -0.92
RTN3-207ENST00000536011 ATG101Q9BSB4 218 aa9.3□□□□□ -0.92
RTN3-207ENST00000536011 TRAV12-2A0A075B6T6 113 aa9.29□□□□□ -0.92
RTN3-207ENST00000536011 C7orf66A4D0T2 115 aa9.29□□□□□ -0.92
RTN3-207ENST00000536011 DEFB130BP0DP73 79 aa9.29□□□□□ -0.92
RTN3-207ENST00000536011 DEFB130AP0DP74 79 aa9.29□□□□□ -0.92
RTN3-207ENST00000536011 PVALBP20472 110 aaPredicted RBP9.29□□□□□ -0.92
RTN3-207ENST00000536011 CDKN1BP46527 198 aa9.29□□□□□ -0.92
RTN3-207ENST00000536011 OR10J6PQ8NGY7 276 aa9.29□□□□□ -0.92
RTN3-207ENST00000536011 SDHCQ99643 169 aaPredicted RBP9.29□□□□□ -0.92
RTN3-207ENST00000536011 C20orf144Q9BQM9 153 aa9.29□□□□□ -0.92
RTN3-207ENST00000536011 PXMP4Q9Y6I8 212 aa9.29□□□□□ -0.92
RTN3-207ENST00000536011 DNAH17Q9UFH2 4485 aa9.29□□□□□ -0.92
RTN3-207ENST00000536011 IGLV2-18A0A075B6J9 118 aa9.28□□□□□ -0.92
RTN3-207ENST00000536011 FAM25EA8MYX2 175 aa9.28□□□□□ -0.92
RTN3-207ENST00000536011 LYRM1O43325 122 aa9.28□□□□□ -0.92
RTN3-207ENST00000536011 ATP5G1P05496 136 aa9.28□□□□□ -0.92
RTN3-207ENST00000536011 ATP5G3P48201 142 aa9.28□□□□□ -0.92
RTN3-207ENST00000536011 BCAP31P51572 246 aa9.28□□□□□ -0.92
RTN3-207ENST00000536011 CAV2P51636 162 aa9.28□□□□□ -0.92
RTN3-207ENST00000536011 GUK1Q16774 197 aa9.28□□□□□ -0.92
RTN3-207ENST00000536011 C10orf113Q5VZT2 155 aa9.28□□□□□ -0.92
RTN3-207ENST00000536011 PATE2Q6UY27 113 aa9.28□□□□□ -0.92
RTN3-207ENST00000536011 ZNF493Q6ZR52 646 aa9.28□□□□□ -0.92
RTN3-207ENST00000536011 Q6ZRG5 221 aa9.28□□□□□ -0.92
RTN3-207ENST00000536011 ZNF331Q9NQX6 463 aaPredicted RBP9.28□□□□□ -0.92
RTN3-207ENST00000536011 NDUFA13Q9P0J0 144 aa9.28□□□□□ -0.92
RTN3-207ENST00000536011 TIMM8BQ9Y5J9 83 aaPredicted RBP9.28□□□□□ -0.92
RTN3-207ENST00000536011 KIAA1109Q2LD37 5005 aa9.27□□□□□ -0.93
RTN3-207ENST00000536011 C5orf51A6NDU8 294 aa9.27□□□□□ -0.93
RTN3-207ENST00000536011 H7BYZ3 331 aa9.27□□□□□ -0.93
RTN3-207ENST00000536011 MRPS12O15235 138 aaKnown RBP9.27□□□□□ -0.93
RTN3-207ENST00000536011 RTL8CO15255 209 aa9.27□□□□□ -0.93
RTN3-207ENST00000536011 CAMLGP49069 296 aa9.27□□□□□ -0.93
RTN3-207ENST00000536011 Q6ZR54 194 aa9.27□□□□□ -0.93
RTN3-207ENST00000536011 OR1L4Q8NGR5 311 aa9.27□□□□□ -0.93
RTN3-207ENST00000536011 ZNF431Q8TF32 576 aaPredicted RBP9.27□□□□□ -0.93
RTN3-207ENST00000536011 TMEM263Q8WUH6 116 aaKnown RBP9.27□□□□□ -0.93
RTN3-207ENST00000536011 PFDN5Q99471 154 aa9.27□□□□□ -0.93
RTN3-207ENST00000536011 MGST2Q99735 147 aa9.27□□□□□ -0.93
RTN3-207ENST00000536011 NUDT15Q9NV35 164 aa9.27□□□□□ -0.93
RTN3-207ENST00000536011 UQCC1Q9NVA1 299 aa9.27□□□□□ -0.93
RTN3-207ENST00000536011 LSM5Q9Y4Y9 91 aaKnown RBP9.27□□□□□ -0.93
RTN3-207ENST00000536011 A0A1B0GVY2 172 aa9.26□□□□□ -0.93
RTN3-207ENST00000536011 CBY3A6NI87 242 aa9.26□□□□□ -0.93
RTN3-207ENST00000536011 F5H768 121 aa9.26□□□□□ -0.93
RTN3-207ENST00000536011 CCSO14618 274 aa9.26□□□□□ -0.93
RTN3-207ENST00000536011 TCRBP04435 133 aa9.26□□□□□ -0.93
RTN3-207ENST00000536011 HTN1P15515 57 aa9.26□□□□□ -0.93
RTN3-207ENST00000536011 HBG1P69891 147 aa9.26□□□□□ -0.93
RTN3-207ENST00000536011 HBG2P69892 147 aa9.26□□□□□ -0.93
RTN3-207ENST00000536011 ARL16Q0P5N6 197 aa9.26□□□□□ -0.93
RTN3-207ENST00000536011 STX12Q86Y82 276 aa9.26□□□□□ -0.93
RTN3-207ENST00000536011 CCDC28AQ8IWP9 274 aa9.26□□□□□ -0.93
RTN3-207ENST00000536011 DNAJC4Q9NNZ3 241 aa9.26□□□□□ -0.93
RTN3-207ENST00000536011 TRAV6A0A075B6T7 132 aa9.25□□□□□ -0.93
RTN3-207ENST00000536011 MED14OSP0DP75 135 aa9.25□□□□□ -0.93
RTN3-207ENST00000536011 AZU1P20160 251 aa9.25□□□□□ -0.93
RTN3-207ENST00000536011 OPCMLQ14982 345 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms