RNA–Protein interactions for RNA: ENST00000534300.5

AMBRA1-212, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 5,067 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-212ENST00000534300 TMEM167AQ8TBQ9 72 aa9.88□□□□□ -0.83
AMBRA1-212ENST00000534300 GLMPQ8WWB7 406 aa9.88□□□□□ -0.83
AMBRA1-212ENST00000534300 ITLN2Q8WWU7 325 aaPredicted RBP9.88□□□□□ -0.83
AMBRA1-212ENST00000534300 TEX43Q6ZNM6 134 aa9.88□□□□□ -0.83
AMBRA1-212ENST00000534300 IGKV2-40A0A087WW87 121 aaPredicted RBP9.88□□□□□ -0.83
AMBRA1-212ENST00000534300 IGKV2D-40P01614 121 aaPredicted RBP9.88□□□□□ -0.83
AMBRA1-212ENST00000534300 RASL10AQ92737 203 aa9.88□□□□□ -0.83
AMBRA1-212ENST00000534300 MBD3L4A6NDZ8 208 aaPredicted RBP9.88□□□□□ -0.83
AMBRA1-212ENST00000534300 MBD3L3A6NE82 208 aaPredicted RBP9.88□□□□□ -0.83
AMBRA1-212ENST00000534300 MBD3L5A6NJ08 208 aaPredicted RBP9.88□□□□□ -0.83
AMBRA1-212ENST00000534300 H3BMM0 161 aa9.88□□□□□ -0.83
AMBRA1-212ENST00000534300 MALP21145 153 aa9.88□□□□□ -0.83
AMBRA1-212ENST00000534300 Q0VFX4 171 aa9.88□□□□□ -0.83
AMBRA1-212ENST00000534300 MBD3L2Q8NHZ7 208 aaPredicted RBP9.88□□□□□ -0.83
AMBRA1-212ENST00000534300 UBE2WQ96B02 151 aa9.88□□□□□ -0.83
AMBRA1-212ENST00000534300 SH2D1AO60880 128 aa9.87□□□□□ -0.83
AMBRA1-212ENST00000534300 IFITM1P13164 125 aa9.87□□□□□ -0.83
AMBRA1-212ENST00000534300 LIME1Q9H400 295 aa9.87□□□□□ -0.83
AMBRA1-212ENST00000534300 SPANXCQ9NY87 97 aa9.87□□□□□ -0.83
AMBRA1-212ENST00000534300 MYMXA0A1B0GTQ4 84 aa9.87□□□□□ -0.83
AMBRA1-212ENST00000534300 ZNF876PQ49A33 203 aa9.87□□□□□ -0.83
AMBRA1-212ENST00000534300 Q6ZRM9 215 aa9.87□□□□□ -0.83
AMBRA1-212ENST00000534300 JPT2Q9H910 190 aa9.87□□□□□ -0.83
AMBRA1-212ENST00000534300 SRRM5B3KS81 715 aa9.87□□□□□ -0.83
AMBRA1-212ENST00000534300 PAX4O43316 350 aa9.87□□□□□ -0.83
AMBRA1-212ENST00000534300 AZU1P20160 251 aa9.87□□□□□ -0.83
AMBRA1-212ENST00000534300 PRR31Q5SQ13 230 aa9.87□□□□□ -0.83
AMBRA1-212ENST00000534300 ZNF492Q9P255 531 aa9.87□□□□□ -0.83
AMBRA1-212ENST00000534300 IGHV1-24A0A0C4DH33 117 aa9.87□□□□□ -0.83
AMBRA1-212ENST00000534300 A0A1W2PPM0 123 aa9.87□□□□□ -0.83
AMBRA1-212ENST00000534300 THBDP07204 575 aa9.87□□□□□ -0.83
AMBRA1-212ENST00000534300 C10orf55Q5SWW7 151 aa9.87□□□□□ -0.83
AMBRA1-212ENST00000534300 NABP1Q96AH0 204 aa9.87□□□□□ -0.83
AMBRA1-212ENST00000534300 TRAV40A0A0B4J280 105 aa9.86□□□□□ -0.83
AMBRA1-212ENST00000534300 A0A0G2JRQ6 117 aa9.86□□□□□ -0.83
AMBRA1-212ENST00000534300 GAGE12JA6NER3 117 aa9.86□□□□□ -0.83
AMBRA1-212ENST00000534300 GAGE7O76087 117 aa9.86□□□□□ -0.83
AMBRA1-212ENST00000534300 GAGE12FP0CL80 117 aa9.86□□□□□ -0.83
AMBRA1-212ENST00000534300 GAGE12GP0CL81 117 aa9.86□□□□□ -0.83
AMBRA1-212ENST00000534300 GAGE12IP0CL82 117 aa9.86□□□□□ -0.83
AMBRA1-212ENST00000534300 EFNA4P52798 201 aa9.86□□□□□ -0.83
AMBRA1-212ENST00000534300 GAGE4Q13068 117 aa9.86□□□□□ -0.83
AMBRA1-212ENST00000534300 BVES-AS1Q5T3Y7 98 aa9.86□□□□□ -0.83
AMBRA1-212ENST00000534300 GAGE2AQ6NT46 116 aa9.86□□□□□ -0.83
AMBRA1-212ENST00000534300 ADARB2-AS1A8MUL3 147 aa9.86□□□□□ -0.83
AMBRA1-212ENST00000534300 C7orf69Q9H7B7 122 aa9.86□□□□□ -0.83
AMBRA1-212ENST00000534300 DKK4Q9UBT3 224 aa9.86□□□□□ -0.83
AMBRA1-212ENST00000534300 PINLYPA6NC86 204 aa9.86□□□□□ -0.83
AMBRA1-212ENST00000534300 MBNL3Q9NUK0 354 aaKnown RBP9.86□□□□□ -0.83
AMBRA1-212ENST00000534300 PSPNO60542 156 aa9.86□□□□□ -0.83
AMBRA1-212ENST00000534300 SLC25A16P16260 332 aa9.86□□□□□ -0.83
AMBRA1-212ENST00000534300 DPH3Q96FX2 82 aa9.86□□□□□ -0.83
AMBRA1-212ENST00000534300 LAMTOR3Q9UHA4 124 aa9.86□□□□□ -0.83
AMBRA1-212ENST00000534300 KIAA2026Q5HYC2 2103 aa9.86□□□□□ -0.83
AMBRA1-212ENST00000534300 VWC2LB2RUY7 222 aa9.85□□□□□ -0.83
AMBRA1-212ENST00000534300 LGALS9BQ3B8N2 356 aa9.85□□□□□ -0.83
AMBRA1-212ENST00000534300 LGALS9CQ6DKI2 356 aa9.85□□□□□ -0.83
AMBRA1-212ENST00000534300 IGHV3-11P01762 117 aa9.85□□□□□ -0.83
AMBRA1-212ENST00000534300 Q86TA4 180 aa9.85□□□□□ -0.83
AMBRA1-212ENST00000534300 ZNF329Q86UD4 541 aa9.85□□□□□ -0.83
AMBRA1-212ENST00000534300 CSTL1Q9H114 145 aa9.85□□□□□ -0.83
AMBRA1-212ENST00000534300 A0A0G2JNJ9 132 aa9.85□□□□□ -0.83
AMBRA1-212ENST00000534300 ARMS2P0C7Q2 107 aa9.85□□□□□ -0.83
AMBRA1-212ENST00000534300 NPC2P61916 151 aa9.85□□□□□ -0.83
AMBRA1-212ENST00000534300 FGFBP3Q8TAT2 258 aa9.85□□□□□ -0.83
AMBRA1-212ENST00000534300 RNF5Q99942 180 aa9.85□□□□□ -0.83
AMBRA1-212ENST00000534300 KLHDC3Q9BQ90 382 aa9.85□□□□□ -0.83
AMBRA1-212ENST00000534300 Q9UFV3 132 aa9.85□□□□□ -0.83
AMBRA1-212ENST00000534300 TRAV3A0A0B4J244 114 aa9.84□□□□□ -0.83
AMBRA1-212ENST00000534300 TAL2Q16559 108 aa9.84□□□□□ -0.83
AMBRA1-212ENST00000534300 SIGLEC15Q6ZMC9 328 aa9.84□□□□□ -0.83
AMBRA1-212ENST00000534300 LY6G5BQ8NDX9 201 aa9.84□□□□□ -0.83
AMBRA1-212ENST00000534300 TIMM21Q9BVV7 248 aa9.84□□□□□ -0.83
AMBRA1-212ENST00000534300 LEPROTO15243 131 aa9.84□□□□□ -0.83
AMBRA1-212ENST00000534300 NUP210Q8TEM1 1887 aaPredicted RBP9.84□□□□□ -0.83
AMBRA1-212ENST00000534300 PAX8Q06710 450 aa9.84□□□□□ -0.83
AMBRA1-212ENST00000534300 C9orf139Q6ZV77 190 aa9.84□□□□□ -0.83
AMBRA1-212ENST00000534300 FAM231DQ6ZW35 169 aa9.84□□□□□ -0.83
AMBRA1-212ENST00000534300 LTBP2Q14767 1821 aa9.84□□□□□ -0.83
AMBRA1-212ENST00000534300 LINC00477Q96M19 166 aa9.84□□□□□ -0.83
AMBRA1-212ENST00000534300 LINC00479Q96M42 142 aa9.84□□□□□ -0.83
AMBRA1-212ENST00000534300 MYO7BQ6PIF6 2116 aa9.83□□□□□ -0.84
AMBRA1-212ENST00000534300 IGHV3OR16-10A0A075B7F0 116 aa9.83□□□□□ -0.84
AMBRA1-212ENST00000534300 SMKR1H3BMG3 65 aa9.83□□□□□ -0.84
AMBRA1-212ENST00000534300 TIMM23O14925 209 aa9.83□□□□□ -0.84
AMBRA1-212ENST00000534300 PF4P02776 101 aa9.83□□□□□ -0.84
AMBRA1-212ENST00000534300 PNRC2Q9NPJ4 139 aaKnown RBP9.83□□□□□ -0.84
AMBRA1-212ENST00000534300 LINC00473A8K010 186 aa9.83□□□□□ -0.84
AMBRA1-212ENST00000534300 SIVA1O15304 175 aa9.83□□□□□ -0.84
AMBRA1-212ENST00000534300 GAGE5Q13069 117 aa9.83□□□□□ -0.84
AMBRA1-212ENST00000534300 GAGE6Q13070 117 aa9.83□□□□□ -0.84
AMBRA1-212ENST00000534300 COA6Q5JTJ3 125 aaKnown RBP9.83□□□□□ -0.84
AMBRA1-212ENST00000534300 PEMTQ9UBM1 199 aa9.83□□□□□ -0.84
AMBRA1-212ENST00000534300 DOCK4Q8N1I0 1966 aa9.83□□□□□ -0.84
AMBRA1-212ENST00000534300 EFNA2O43921 213 aa9.83□□□□□ -0.84
AMBRA1-212ENST00000534300 TFF1P04155 84 aa9.83□□□□□ -0.84
AMBRA1-212ENST00000534300 SELLP14151 372 aa9.83□□□□□ -0.84
AMBRA1-212ENST00000534300 VDAC2P45880 294 aaPredicted RBP9.83□□□□□ -0.84
AMBRA1-212ENST00000534300 FAM104BQ5XKR9 115 aa9.83□□□□□ -0.84
AMBRA1-212ENST00000534300 VGLL1Q99990 258 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms