RNA–Protein interactions for RNA: ENST00000534273.1

PACS1-215, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 3

Gene PACS1, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-215ENST00000534273 A8MTW9 85 aa13.73□□□□□ -0.21
PACS1-215ENST00000534273 FGF7P21781 194 aa13.73□□□□□ -0.21
PACS1-215ENST00000534273 FXYD7P58549 80 aa13.73□□□□□ -0.21
PACS1-215ENST00000534273 PSG9Q00887 426 aa13.73□□□□□ -0.21
PACS1-215ENST00000534273 C11orf45Q8TAV5 145 aa13.73□□□□□ -0.21
PACS1-215ENST00000534273 MED28Q9H204 178 aa13.73□□□□□ -0.21
PACS1-215ENST00000534273 SLC39A9Q9NUM3 307 aa13.73□□□□□ -0.21
PACS1-215ENST00000534273 NANOS2P60321 138 aaKnown RBP13.72□□□□□ -0.21
PACS1-215ENST00000534273 B2MP61769 119 aa13.72□□□□□ -0.21
PACS1-215ENST00000534273 OR5C1Q8NGR4 320 aa13.72□□□□□ -0.21
PACS1-215ENST00000534273 OR1L4Q8NGR5 311 aa13.72□□□□□ -0.21
PACS1-215ENST00000534273 SLC35B3Q9H1N7 401 aa13.72□□□□□ -0.21
PACS1-215ENST00000534273 RYR2Q92736 4967 aa13.72□□□□□ -0.21
PACS1-215ENST00000534273 MPDU1O75352 247 aa13.71□□□□□ -0.21
PACS1-215ENST00000534273 MPC2O95563 127 aa13.71□□□□□ -0.21
PACS1-215ENST00000534273 CXCL3P19876 107 aa13.71□□□□□ -0.21
PACS1-215ENST00000534273 AMTNQ6UX39 209 aa13.71□□□□□ -0.21
PACS1-215ENST00000534273 ZNF705AQ6ZN79 300 aaPredicted RBP13.71□□□□□ -0.21
PACS1-215ENST00000534273 BPIFA4PQ86YQ2 179 aa13.71□□□□□ -0.21
PACS1-215ENST00000534273 ZNF738Q8NE65 137 aa13.71□□□□□ -0.21
PACS1-215ENST00000534273 PHLDA1Q8WV24 401 aaPredicted RBP13.71□□□□□ -0.21
PACS1-215ENST00000534273 ST6GAL2Q96JF0 529 aa13.71□□□□□ -0.21
PACS1-215ENST00000534273 PFDN5Q99471 154 aa13.71□□□□□ -0.21
PACS1-215ENST00000534273 MFFQ9GZY8 342 aa13.71□□□□□ -0.21
PACS1-215ENST00000534273 PXMP4Q9Y6I8 212 aa13.71□□□□□ -0.21
PACS1-215ENST00000534273 TRAV5A0A0B4J249 113 aa13.7□□□□□ -0.22
PACS1-215ENST00000534273 JTBO76095 146 aa13.7□□□□□ -0.22
PACS1-215ENST00000534273 DUSP14O95147 198 aaKnown RBP13.7□□□□□ -0.22
PACS1-215ENST00000534273 CXCL2P19875 107 aa13.7□□□□□ -0.22
PACS1-215ENST00000534273 HLA-DMBP28068 263 aa13.7□□□□□ -0.22
PACS1-215ENST00000534273 CNN1P51911 297 aaKnown RBP13.7□□□□□ -0.22
PACS1-215ENST00000534273 CLINT1Q14677 625 aa13.7□□□□□ -0.22
PACS1-215ENST00000534273 PSG3Q16557 428 aa13.7□□□□□ -0.22
PACS1-215ENST00000534273 LRRC20Q8TCA0 184 aa13.7□□□□□ -0.22
PACS1-215ENST00000534273 NPCDR1Q9BY65 106 aa13.7□□□□□ -0.22
PACS1-215ENST00000534273 ZNF705FA8MVS1 300 aaPredicted RBP13.69□□□□□ -0.22
PACS1-215ENST00000534273 SNRPCP09234 159 aaKnown RBP13.69□□□□□ -0.22
PACS1-215ENST00000534273 ZNF705DP0CH99 300 aaPredicted RBP13.69□□□□□ -0.22
PACS1-215ENST00000534273 ZNF705BP0CI00 300 aaPredicted RBP13.69□□□□□ -0.22
PACS1-215ENST00000534273 IGLC2P0DOY2 106 aa13.69□□□□□ -0.22
PACS1-215ENST00000534273 FCN2Q15485 313 aa13.69□□□□□ -0.22
PACS1-215ENST00000534273 LCN15Q6UWW0 184 aa13.69□□□□□ -0.22
PACS1-215ENST00000534273 TCTE3Q8IZS6 198 aa13.69□□□□□ -0.22
PACS1-215ENST00000534273 THAP6Q8TBB0 222 aa13.69□□□□□ -0.22
PACS1-215ENST00000534273 HRH4Q9H3N8 390 aa13.69□□□□□ -0.22
PACS1-215ENST00000534273 LYSTQ99698 3801 aa13.69□□□□□ -0.22
PACS1-215ENST00000534273 H3BQ15 152 aa13.68□□□□□ -0.22
PACS1-215ENST00000534273 PET100P0DJ07 73 aa13.68□□□□□ -0.22
PACS1-215ENST00000534273 OR11H7Q8NGC8 314 aa13.68□□□□□ -0.22
PACS1-215ENST00000534273 NEU1Q99519 415 aa13.68□□□□□ -0.22
PACS1-215ENST00000534273 ZNF331Q9NQX6 463 aaPredicted RBP13.68□□□□□ -0.22
PACS1-215ENST00000534273 KLK5Q9Y337 293 aaPredicted RBP13.68□□□□□ -0.22
PACS1-215ENST00000534273 PLECQ15149 4684 aaKnown RBP13.67□□□□□ -0.22
PACS1-215ENST00000534273 H3BTX0 84 aa13.67□□□□□ -0.22
PACS1-215ENST00000534273 CD300CQ08708 224 aa13.67□□□□□ -0.22
PACS1-215ENST00000534273 OR8A1Q8NGG7 326 aa13.67□□□□□ -0.22
PACS1-215ENST00000534273 ASB13Q8WXK3 278 aa13.67□□□□□ -0.22
PACS1-215ENST00000534273 SLC50A1Q9BRV3 221 aa13.67□□□□□ -0.22
PACS1-215ENST00000534273 MBD2Q9UBB5 411 aa13.67□□□□□ -0.22
PACS1-215ENST00000534273 HSPB11Q9Y547 144 aa13.67□□□□□ -0.22
PACS1-215ENST00000534273 DNAH1Q9P2D7 4330 aa13.67□□□□□ -0.22
PACS1-215ENST00000534273 SMIM9A6NGZ8 99 aa13.66□□□□□ -0.22
PACS1-215ENST00000534273 SLC17A3O00476 420 aa13.66□□□□□ -0.22
PACS1-215ENST00000534273 GCSAMLQ5JQS6 135 aa13.66□□□□□ -0.22
PACS1-215ENST00000534273 C1orf158Q8N1D5 194 aa13.66□□□□□ -0.22
PACS1-215ENST00000534273 RPUSD4Q96CM3 377 aaKnown RBP13.66□□□□□ -0.22
PACS1-215ENST00000534273 SAT2Q96F10 170 aaPredicted RBP13.66□□□□□ -0.22
PACS1-215ENST00000534273 WDR61Q9GZS3 305 aaKnown RBP13.66□□□□□ -0.22
PACS1-215ENST00000534273 GOLT1BQ9Y3E0 138 aa13.66□□□□□ -0.22
PACS1-215ENST00000534273 ALMS1Q8TCU4 4167 aa13.66□□□□□ -0.22
PACS1-215ENST00000534273 IGHV3OR16-12A0A075B7B8 117 aa13.65□□□□□ -0.22
PACS1-215ENST00000534273 RPL12P30050 165 aaKnown RBP13.65□□□□□ -0.22
PACS1-215ENST00000534273 HIST1H1AQ02539 215 aaPredicted RBP13.65□□□□□ -0.22
PACS1-215ENST00000534273 GUK1Q16774 197 aa13.65□□□□□ -0.22
PACS1-215ENST00000534273 IGF2BP2-AS1Q96M15 143 aa13.65□□□□□ -0.22
PACS1-215ENST00000534273 ATP5SQ99766 215 aa13.65□□□□□ -0.22
PACS1-215ENST00000534273 BOLA2-SMG1P6H3BVE0 249 aa13.64□□□□□ -0.23
PACS1-215ENST00000534273 AMBPP02760 352 aa13.64□□□□□ -0.23
PACS1-215ENST00000534273 PRB4P10163 310 aaPredicted RBP13.64□□□□□ -0.23
PACS1-215ENST00000534273 SPINK13Q1W4C9 94 aa13.64□□□□□ -0.23
PACS1-215ENST00000534273 ZNF586Q9NXT0 402 aa13.64□□□□□ -0.23
PACS1-215ENST00000534273 TMEM14CQ9P0S9 112 aa13.64□□□□□ -0.23
PACS1-215ENST00000534273 CELA1Q9UNI1 258 aa13.64□□□□□ -0.23
PACS1-215ENST00000534273 M0R2Z0 102 aa13.63□□□□□ -0.23
PACS1-215ENST00000534273 CRXO43186 299 aaPredicted RBP13.63□□□□□ -0.23
PACS1-215ENST00000534273 KCNIP2Q9NS61 270 aa13.63□□□□□ -0.23
PACS1-215ENST00000534273 RFNGQ9Y644 331 aa13.63□□□□□ -0.23
PACS1-215ENST00000534273 PRAC2D3DTV9 90 aa13.62□□□□□ -0.23
PACS1-215ENST00000534273 GIPP09681 153 aaPredicted RBP13.62□□□□□ -0.23
PACS1-215ENST00000534273 RHOBP62745 196 aa13.62□□□□□ -0.23
PACS1-215ENST00000534273 LINC00476Q8WZB0 136 aa13.62□□□□□ -0.23
PACS1-215ENST00000534273 SMIM3Q9BZL3 60 aa13.62□□□□□ -0.23
PACS1-215ENST00000534273 TRBV19A0A075B6N1 114 aa13.61□□□□□ -0.23
PACS1-215ENST00000534273 TMEM189A5PLL7 270 aa13.61□□□□□ -0.23
PACS1-215ENST00000534273 C11orf94C9JXX5 98 aa13.61□□□□□ -0.23
PACS1-215ENST00000534273 ZNF253O75346 499 aa13.61□□□□□ -0.23
PACS1-215ENST00000534273 INSP01308 110 aa13.61□□□□□ -0.23
PACS1-215ENST00000534273 C1QBP02746 253 aa13.61□□□□□ -0.23
PACS1-215ENST00000534273 HIST1H1EP10412 219 aaKnown RBP13.61□□□□□ -0.23
PACS1-215ENST00000534273 C12orf74Q32Q52 190 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms