RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 CAV2P51636 162 aa11.03□□□□□ -0.64
CPSF1-211ENST00000533492 RHOBP62745 196 aa11.03□□□□□ -0.64
CPSF1-211ENST00000533492 RAB31Q13636 194 aa11.03□□□□□ -0.64
CPSF1-211ENST00000533492 PSG3Q16557 428 aa11.03□□□□□ -0.64
CPSF1-211ENST00000533492 LINC00305Q7Z4B0 112 aa11.03□□□□□ -0.64
CPSF1-211ENST00000533492 C2orf50Q96LR7 162 aa11.03□□□□□ -0.64
CPSF1-211ENST00000533492 PLA2G2EQ9NZK7 142 aa11.03□□□□□ -0.64
CPSF1-211ENST00000533492 HTN3P15516 51 aa11.02□□□□□ -0.65
CPSF1-211ENST00000533492 CXCL3P19876 107 aa11.02□□□□□ -0.65
CPSF1-211ENST00000533492 B2MP61769 119 aa11.02□□□□□ -0.65
CPSF1-211ENST00000533492 HIST1H1AQ02539 215 aaPredicted RBP11.02□□□□□ -0.65
CPSF1-211ENST00000533492 OR8A1Q8NGG7 326 aa11.02□□□□□ -0.65
CPSF1-211ENST00000533492 FAM24AA6NFZ4 105 aa11.01□□□□□ -0.65
CPSF1-211ENST00000533492 CST7O76096 145 aa11.01□□□□□ -0.65
CPSF1-211ENST00000533492 CAMLGP49069 296 aa11.01□□□□□ -0.65
CPSF1-211ENST00000533492 DAD1P61803 113 aa11.01□□□□□ -0.65
CPSF1-211ENST00000533492 OXA1LQ15070 435 aa11.01□□□□□ -0.65
CPSF1-211ENST00000533492 C10orf113Q5VZT2 155 aa11.01□□□□□ -0.65
CPSF1-211ENST00000533492 MZT2BQ6NZ67 158 aa11.01□□□□□ -0.65
CPSF1-211ENST00000533492 Q6ZRG5 221 aa11.01□□□□□ -0.65
CPSF1-211ENST00000533492 BPIFA4PQ86YQ2 179 aa11.01□□□□□ -0.65
CPSF1-211ENST00000533492 FAM210BQ96KR6 192 aa11.01□□□□□ -0.65
CPSF1-211ENST00000533492 MGST2Q99735 147 aa11.01□□□□□ -0.65
CPSF1-211ENST00000533492 ZNF705GA8MUZ8 300 aaPredicted RBP11□□□□□ -0.65
CPSF1-211ENST00000533492 BOLA2-SMG1P6H3BVE0 249 aa11□□□□□ -0.65
CPSF1-211ENST00000533492 CRXO43186 299 aaPredicted RBP11□□□□□ -0.65
CPSF1-211ENST00000533492 CXCL2P19875 107 aa11□□□□□ -0.65
CPSF1-211ENST00000533492 S100A10P60903 97 aa11□□□□□ -0.65
CPSF1-211ENST00000533492 LCN15Q6UWW0 184 aa11□□□□□ -0.65
CPSF1-211ENST00000533492 BAP18Q8IXM2 172 aa11□□□□□ -0.65
CPSF1-211ENST00000533492 POM121L12Q8N7R1 296 aa11□□□□□ -0.65
CPSF1-211ENST00000533492 RPUSD4Q96CM3 377 aaKnown RBP11□□□□□ -0.65
CPSF1-211ENST00000533492 SLC50A1Q9BRV3 221 aa11□□□□□ -0.65
CPSF1-211ENST00000533492 TRAV12-2A0A075B6T6 113 aa10.99□□□□□ -0.65
CPSF1-211ENST00000533492 MRPS12O15235 138 aaKnown RBP10.99□□□□□ -0.65
CPSF1-211ENST00000533492 SNRPCP09234 159 aaKnown RBP10.99□□□□□ -0.65
CPSF1-211ENST00000533492 LINC00299Q6ZSB3 139 aa10.99□□□□□ -0.65
CPSF1-211ENST00000533492 NRARPQ7Z6K4 114 aa10.99□□□□□ -0.65
CPSF1-211ENST00000533492 S100ZQ8WXG8 99 aa10.99□□□□□ -0.65
CPSF1-211ENST00000533492 TMEM37Q8WXS4 190 aa10.99□□□□□ -0.65
CPSF1-211ENST00000533492 LINC01587Q99440 93 aa10.99□□□□□ -0.65
CPSF1-211ENST00000533492 DNAJC4Q9NNZ3 241 aa10.99□□□□□ -0.65
CPSF1-211ENST00000533492 UQCC1Q9NVA1 299 aa10.99□□□□□ -0.65
CPSF1-211ENST00000533492 VPS13DQ5THJ4 4388 aa10.99□□□□□ -0.65
CPSF1-211ENST00000533492 PRM2P04554 102 aa10.98□□□□□ -0.65
CPSF1-211ENST00000533492 PRB4P10163 310 aaPredicted RBP10.98□□□□□ -0.65
CPSF1-211ENST00000533492 S100A11P31949 105 aa10.98□□□□□ -0.65
CPSF1-211ENST00000533492 MIC13Q5XKP0 118 aa10.98□□□□□ -0.65
CPSF1-211ENST00000533492 STX12Q86Y82 276 aa10.98□□□□□ -0.65
CPSF1-211ENST00000533492 UBE2DNLQ8IWF7 75 aa10.98□□□□□ -0.65
CPSF1-211ENST00000533492 TMEM256Q8N2U0 113 aa10.98□□□□□ -0.65
CPSF1-211ENST00000533492 OR1L4Q8NGR5 311 aa10.98□□□□□ -0.65
CPSF1-211ENST00000533492 ZNF331Q9NQX6 463 aaPredicted RBP10.98□□□□□ -0.65
CPSF1-211ENST00000533492 LYRM9A8MSI8 78 aa10.97□□□□□ -0.65
CPSF1-211ENST00000533492 HTN1P15515 57 aa10.97□□□□□ -0.65
CPSF1-211ENST00000533492 SULT1A1P50225 295 aa10.97□□□□□ -0.65
CPSF1-211ENST00000533492 HBG1P69891 147 aa10.97□□□□□ -0.65
CPSF1-211ENST00000533492 HBG2P69892 147 aa10.97□□□□□ -0.65
CPSF1-211ENST00000533492 BAXQ07812 192 aa10.97□□□□□ -0.65
CPSF1-211ENST00000533492 RAB32Q13637 225 aa10.97□□□□□ -0.65
CPSF1-211ENST00000533492 OPCMLQ14982 345 aa10.97□□□□□ -0.65
CPSF1-211ENST00000533492 PFDN5Q99471 154 aa10.97□□□□□ -0.65
CPSF1-211ENST00000533492 C11orf1Q9H5F2 150 aa10.97□□□□□ -0.65
CPSF1-211ENST00000533492 LYRM2Q9NU23 88 aaPredicted RBP10.97□□□□□ -0.65
CPSF1-211ENST00000533492 WDR83OSQ9Y284 106 aa10.97□□□□□ -0.65
CPSF1-211ENST00000533492 FRAS1Q86XX4 4008 aa10.97□□□□□ -0.65
CPSF1-211ENST00000533492 UBE2L5PA0A1B0GUS4 154 aa10.96□□□□□ -0.65
CPSF1-211ENST00000533492 H3BTX0 84 aa10.96□□□□□ -0.65
CPSF1-211ENST00000533492 TSPOP30536 169 aa10.96□□□□□ -0.65
CPSF1-211ENST00000533492 CDKN1BP46527 198 aa10.96□□□□□ -0.65
CPSF1-211ENST00000533492 ASAH1Q13510 395 aa10.96□□□□□ -0.65
CPSF1-211ENST00000533492 MORN5Q5VZ52 161 aa10.96□□□□□ -0.65
CPSF1-211ENST00000533492 TMEM252Q8N6L7 170 aa10.96□□□□□ -0.65
CPSF1-211ENST00000533492 OR10J6PQ8NGY7 276 aa10.96□□□□□ -0.65
CPSF1-211ENST00000533492 GPN1Q9HCN4 374 aaPredicted RBP10.96□□□□□ -0.65
CPSF1-211ENST00000533492 PXMP4Q9Y6I8 212 aa10.96□□□□□ -0.65
CPSF1-211ENST00000533492 IGSF23A1L1A6 192 aa10.95□□□□□ -0.66
CPSF1-211ENST00000533492 DEFB130BP0DP73 79 aa10.95□□□□□ -0.66
CPSF1-211ENST00000533492 DEFB130AP0DP74 79 aa10.95□□□□□ -0.66
CPSF1-211ENST00000533492 AZU1P20160 251 aa10.95□□□□□ -0.66
CPSF1-211ENST00000533492 RPL29P47914 159 aaKnown RBP10.95□□□□□ -0.66
CPSF1-211ENST00000533492 TAS2R60P59551 318 aa10.95□□□□□ -0.66
CPSF1-211ENST00000533492 IL15RAQ13261 267 aa10.95□□□□□ -0.66
CPSF1-211ENST00000533492 GUK1Q16774 197 aa10.95□□□□□ -0.66
CPSF1-211ENST00000533492 ATP6V1FQ16864 119 aa10.95□□□□□ -0.66
CPSF1-211ENST00000533492 VWC2Q2TAL6 325 aa10.95□□□□□ -0.66
CPSF1-211ENST00000533492 ENKURQ8TC29 256 aa10.95□□□□□ -0.66
CPSF1-211ENST00000533492 SLC39A9Q9NUM3 307 aa10.95□□□□□ -0.66
CPSF1-211ENST00000533492 DNAH10Q8IVF4 4471 aa10.94□□□□□ -0.66
CPSF1-211ENST00000533492 TRAV5A0A0B4J249 113 aa10.94□□□□□ -0.66
CPSF1-211ENST00000533492 M0R2N4 97 aa10.94□□□□□ -0.66
CPSF1-211ENST00000533492 RLN2P04090 185 aa10.94□□□□□ -0.66
CPSF1-211ENST00000533492 IGLC2P0DOY2 106 aa10.94□□□□□ -0.66
CPSF1-211ENST00000533492 FGF7P21781 194 aa10.94□□□□□ -0.66
CPSF1-211ENST00000533492 TMEM88Q6PEY1 159 aa10.94□□□□□ -0.66
CPSF1-211ENST00000533492 H3BQ15 152 aa10.93□□□□□ -0.66
CPSF1-211ENST00000533492 SLC17A3O00476 420 aa10.93□□□□□ -0.66
CPSF1-211ENST00000533492 FCN2Q15485 313 aa10.93□□□□□ -0.66
CPSF1-211ENST00000533492 LINC00336Q6ZUF6 198 aa10.93□□□□□ -0.66
CPSF1-211ENST00000533492 SAT2Q96F10 170 aaPredicted RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 509.3 ms