RNA–Protein interactions for RNA: ENST00000533242.1

NEDD8-207, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 1 (best)

Gene NEDD8, Length 2,300 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-207ENST00000533242 LCE6AA0A183 80 aa6.36□□□□□ -1.39
NEDD8-207ENST00000533242 MT-CO2P00403 227 aa6.36□□□□□ -1.39
NEDD8-207ENST00000533242 CRYGBP07316 175 aa6.36□□□□□ -1.39
NEDD8-207ENST00000533242 GPX4P36969 197 aaPredicted RBP6.36□□□□□ -1.39
NEDD8-207ENST00000533242 FAM71F2Q6NXP2 309 aa6.36□□□□□ -1.39
NEDD8-207ENST00000533242 ZNF664Q8N3J9 261 aa6.36□□□□□ -1.39
NEDD8-207ENST00000533242 C14orf144Q96I85 54 aa6.36□□□□□ -1.39
NEDD8-207ENST00000533242 A0A1W2PN81 502 aa6.35□□□□□ -1.39
NEDD8-207ENST00000533242 SH2D7A6NKC9 451 aaPredicted RBP6.35□□□□□ -1.39
NEDD8-207ENST00000533242 FCN1O00602 326 aa6.35□□□□□ -1.39
NEDD8-207ENST00000533242 CD24P25063 80 aa6.35□□□□□ -1.39
NEDD8-207ENST00000533242 GNG5P63218 68 aa6.35□□□□□ -1.39
NEDD8-207ENST00000533242 TNXAQ16473 311 aa6.35□□□□□ -1.39
NEDD8-207ENST00000533242 LEMD1Q68G75 181 aa6.35□□□□□ -1.39
NEDD8-207ENST00000533242 C8orf86Q6ZUL3 223 aa6.35□□□□□ -1.39
NEDD8-207ENST00000533242 OR4A5Q8NH83 315 aa6.35□□□□□ -1.39
NEDD8-207ENST00000533242 VSTM2AQ8TAG5 236 aa6.35□□□□□ -1.39
NEDD8-207ENST00000533242 MISP3Q96FF7 219 aa6.35□□□□□ -1.39
NEDD8-207ENST00000533242 SGK494Q96LW2 274 aa6.35□□□□□ -1.39
NEDD8-207ENST00000533242 ASCL2Q99929 193 aa6.35□□□□□ -1.39
NEDD8-207ENST00000533242 IGHV1-3A0A0C4DH29 117 aa6.34□□□□□ -1.39
NEDD8-207ENST00000533242 A0A1W2PRE2 83 aa6.34□□□□□ -1.39
NEDD8-207ENST00000533242 BUB1B-PAK6H3BSN5 160 aa6.34□□□□□ -1.39
NEDD8-207ENST00000533242 H3BTX0 84 aa6.34□□□□□ -1.39
NEDD8-207ENST00000533242 PRB4P10163 310 aaPredicted RBP6.34□□□□□ -1.39
NEDD8-207ENST00000533242 ATP5IP56385 69 aaPredicted RBP6.34□□□□□ -1.39
NEDD8-207ENST00000533242 C9orf66Q5T8R8 295 aa6.34□□□□□ -1.39
NEDD8-207ENST00000533242 C10orf113Q5VZT2 155 aa6.34□□□□□ -1.39
NEDD8-207ENST00000533242 C18orf65Q6ZTR6 163 aa6.34□□□□□ -1.39
NEDD8-207ENST00000533242 THAP8Q8NA92 274 aa6.34□□□□□ -1.39
NEDD8-207ENST00000533242 KLHL30-AS1Q8NEE0 82 aa6.34□□□□□ -1.39
NEDD8-207ENST00000533242 OR1L6Q8NGR2 347 aa6.34□□□□□ -1.39
NEDD8-207ENST00000533242 FXYD5Q96DB9 178 aa6.34□□□□□ -1.39
NEDD8-207ENST00000533242 PRR25Q96S07 402 aa6.34□□□□□ -1.39
NEDD8-207ENST00000533242 MRPL18Q9H0U6 180 aaKnown RBP6.34□□□□□ -1.39
NEDD8-207ENST00000533242 MOB4Q9Y3A3 225 aa6.34□□□□□ -1.39
NEDD8-207ENST00000533242 LY96Q9Y6Y9 160 aa6.34□□□□□ -1.39
NEDD8-207ENST00000533242 ARL2-SNX15V9GYD0 113 aa6.34□□□□□ -1.39
NEDD8-207ENST00000533242 DYNC2H1Q8NCM8 4307 aaKnown RBP6.34□□□□□ -1.39
NEDD8-207ENST00000533242 ZNF705GA8MUZ8 300 aaPredicted RBP6.34□□□□□ -1.39
NEDD8-207ENST00000533242 OOSP1A8MZH6 123 aa6.34□□□□□ -1.39
NEDD8-207ENST00000533242 TEX22C9J3V5 150 aa6.34□□□□□ -1.39
NEDD8-207ENST00000533242 ISLRO14498 428 aa6.34□□□□□ -1.39
NEDD8-207ENST00000533242 COX7A2P2O60397 106 aa6.34□□□□□ -1.39
NEDD8-207ENST00000533242 GCGP01275 180 aa6.34□□□□□ -1.39
NEDD8-207ENST00000533242 CRYGCP07315 174 aa6.34□□□□□ -1.39
NEDD8-207ENST00000533242 MGST1P10620 155 aaKnown RBP6.34□□□□□ -1.39
NEDD8-207ENST00000533242 ORM2P19652 201 aa6.34□□□□□ -1.39
NEDD8-207ENST00000533242 CEACAM3P40198 252 aa6.34□□□□□ -1.39
NEDD8-207ENST00000533242 TAS2R45P59539 299 aa6.34□□□□□ -1.39
NEDD8-207ENST00000533242 KIAA1644Q3SXP7 199 aa6.34□□□□□ -1.39
NEDD8-207ENST00000533242 VMA21Q3ZAQ7 101 aa6.34□□□□□ -1.39
NEDD8-207ENST00000533242 LINC00305Q7Z4B0 112 aa6.34□□□□□ -1.39
NEDD8-207ENST00000533242 ZNF329Q86UD4 541 aa6.34□□□□□ -1.39
NEDD8-207ENST00000533242 FBXL15Q9H469 300 aa6.34□□□□□ -1.39
NEDD8-207ENST00000533242 SNURFLB1AK76 121 aa6.33□□□□□ -1.4
NEDD8-207ENST00000533242 DDTP30046 118 aa6.33□□□□□ -1.4
NEDD8-207ENST00000533242 MC5RP33032 325 aa6.33□□□□□ -1.4
NEDD8-207ENST00000533242 SELENOTP62341 195 aa6.33□□□□□ -1.4
NEDD8-207ENST00000533242 RPEL1Q2QD12 228 aa6.33□□□□□ -1.4
NEDD8-207ENST00000533242 TPTE2P1Q5T6R2 138 aa6.33□□□□□ -1.4
NEDD8-207ENST00000533242 PVRIGQ6DKI7 326 aa6.33□□□□□ -1.4
NEDD8-207ENST00000533242 PAXXQ9BUH6 204 aa6.33□□□□□ -1.4
NEDD8-207ENST00000533242 MRPL32Q9BYC8 188 aaKnown RBP6.33□□□□□ -1.4
NEDD8-207ENST00000533242 BIRC6Q9NR09 4857 aa6.33□□□□□ -1.4
NEDD8-207ENST00000533242 LY6LH3BQJ8 138 aa6.33□□□□□ -1.4
NEDD8-207ENST00000533242 SERF1AO75920 110 aa6.33□□□□□ -1.4
NEDD8-207ENST00000533242 RPL27AP46776 148 aaKnown RBP6.33□□□□□ -1.4
NEDD8-207ENST00000533242 LGALS7P47929 136 aa6.33□□□□□ -1.4
NEDD8-207ENST00000533242 PKIAP61925 76 aa6.33□□□□□ -1.4
NEDD8-207ENST00000533242 RANP62826 216 aaKnown RBP6.33□□□□□ -1.4
NEDD8-207ENST00000533242 DNLZQ5SXM8 178 aa6.33□□□□□ -1.4
NEDD8-207ENST00000533242 CCDC144NLQ6NUI1 221 aa6.33□□□□□ -1.4
NEDD8-207ENST00000533242 MRPL54Q6P161 138 aaKnown RBP6.33□□□□□ -1.4
NEDD8-207ENST00000533242 OR1B1Q8NGR6 318 aa6.33□□□□□ -1.4
NEDD8-207ENST00000533242 TMEM18Q96B42 140 aa6.33□□□□□ -1.4
NEDD8-207ENST00000533242 RAX2Q96IS3 184 aa6.33□□□□□ -1.4
NEDD8-207ENST00000533242 BTF3L4Q96K17 158 aa6.33□□□□□ -1.4
NEDD8-207ENST00000533242 AMMECR1Q9Y4X0 333 aaPredicted RBP6.33□□□□□ -1.4
NEDD8-207ENST00000533242 CCL24O00175 119 aa6.32□□□□□ -1.4
NEDD8-207ENST00000533242 CORTO00230 105 aa6.32□□□□□ -1.4
NEDD8-207ENST00000533242 FAM106CPP0CH98 169 aa6.32□□□□□ -1.4
NEDD8-207ENST00000533242 PRRX1P54821 245 aa6.32□□□□□ -1.4
NEDD8-207ENST00000533242 RAB4BP61018 213 aa6.32□□□□□ -1.4
NEDD8-207ENST00000533242 CX3CL1P78423 397 aa6.32□□□□□ -1.4
NEDD8-207ENST00000533242 TIGITQ495A1 244 aa6.32□□□□□ -1.4
NEDD8-207ENST00000533242 IBA57Q5T440 356 aaKnown RBP6.32□□□□□ -1.4
NEDD8-207ENST00000533242 TMEM136Q6ZRR5 245 aa6.32□□□□□ -1.4
NEDD8-207ENST00000533242 Q6ZWC4 215 aa6.32□□□□□ -1.4
NEDD8-207ENST00000533242 PPP1R27Q86WC6 154 aa6.32□□□□□ -1.4
NEDD8-207ENST00000533242 TEX45Q8NA69 505 aa6.32□□□□□ -1.4
NEDD8-207ENST00000533242 BLNKQ8WV28 456 aa6.32□□□□□ -1.4
NEDD8-207ENST00000533242 OSTCQ9NRP0 149 aa6.32□□□□□ -1.4
NEDD8-207ENST00000533242 A8MWP6 167 aa6.32□□□□□ -1.4
NEDD8-207ENST00000533242 PEX7O00628 323 aa6.32□□□□□ -1.4
NEDD8-207ENST00000533242 TDRG1Q3Y452 100 aa6.32□□□□□ -1.4
NEDD8-207ENST00000533242 LINC00322Q6ZN03 302 aaPredicted RBP6.32□□□□□ -1.4
NEDD8-207ENST00000533242 C5orf56Q8N8D9 126 aa6.32□□□□□ -1.4
NEDD8-207ENST00000533242 TMEM116Q8NCL8 245 aa6.32□□□□□ -1.4
NEDD8-207ENST00000533242 NOL4LQ96MY1 436 aaPredicted RBP6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms