RNA–Protein interactions for RNA: ENST00000533064.1

TRIM3-212, Transcript of tripartite motif containing 3, humanhuman

TSL 1 (best)

Gene TRIM3, Length 1,654 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-212ENST00000533064 IGHV3-74A0A0B4J1X5 117 aa10.83□□□□□ -0.68
TRIM3-212ENST00000533064 TRAV5A0A0B4J249 113 aa10.83□□□□□ -0.68
TRIM3-212ENST00000533064 TMEM213A2RRL7 107 aa10.83□□□□□ -0.68
TRIM3-212ENST00000533064 BUB3O43684 328 aa10.83□□□□□ -0.68
TRIM3-212ENST00000533064 PDE6DO43924 150 aa10.83□□□□□ -0.68
TRIM3-212ENST00000533064 C1orf194Q5T5A4 169 aa10.83□□□□□ -0.68
TRIM3-212ENST00000533064 GPR82Q96P67 336 aa10.83□□□□□ -0.68
TRIM3-212ENST00000533064 U3KQE9 123 aa10.83□□□□□ -0.68
TRIM3-212ENST00000533064 IGHV3-66A0A0C4DH42 116 aa10.82□□□□□ -0.68
TRIM3-212ENST00000533064 C2orf70A6NJV1 201 aa10.82□□□□□ -0.68
TRIM3-212ENST00000533064 FAM74A7A6NL05 159 aa10.82□□□□□ -0.68
TRIM3-212ENST00000533064 RPL7P18124 248 aaKnown RBP10.82□□□□□ -0.68
TRIM3-212ENST00000533064 RHPN1-AS1Q9BWJ2 59 aa10.82□□□□□ -0.68
TRIM3-212ENST00000533064 SMPXQ9UHP9 88 aa10.82□□□□□ -0.68
TRIM3-212ENST00000533064 YTHDF2Q9Y5A9 579 aaKnown RBP10.82□□□□□ -0.68
TRIM3-212ENST00000533064 F6UZH7 168 aa10.82□□□□□ -0.68
TRIM3-212ENST00000533064 APOHP02749 345 aaPredicted RBP10.82□□□□□ -0.68
TRIM3-212ENST00000533064 CBLN1P23435 193 aa10.82□□□□□ -0.68
TRIM3-212ENST00000533064 GALR1P47211 349 aa10.82□□□□□ -0.68
TRIM3-212ENST00000533064 ATP5G3P48201 142 aa10.82□□□□□ -0.68
TRIM3-212ENST00000533064 UBE2L3P68036 154 aaKnown RBP10.82□□□□□ -0.68
TRIM3-212ENST00000533064 NIPSNAP3BQ9BS92 247 aa10.82□□□□□ -0.68
TRIM3-212ENST00000533064 PAXXQ9BUH6 204 aa10.82□□□□□ -0.68
TRIM3-212ENST00000533064 OR51M1Q9H341 326 aa10.82□□□□□ -0.68
TRIM3-212ENST00000533064 SORL1Q92673 2214 aa10.81□□□□□ -0.68
TRIM3-212ENST00000533064 H3BQ15 152 aa10.81□□□□□ -0.68
TRIM3-212ENST00000533064 CHEK1O14757 476 aa10.81□□□□□ -0.68
TRIM3-212ENST00000533064 OR10J4P0C629 311 aa10.81□□□□□ -0.68
TRIM3-212ENST00000533064 FOLR2P14207 255 aa10.81□□□□□ -0.68
TRIM3-212ENST00000533064 FAM74A3Q4VXF1 159 aa10.81□□□□□ -0.68
TRIM3-212ENST00000533064 C16orf54Q6UWD8 224 aa10.81□□□□□ -0.68
TRIM3-212ENST00000533064 VWFP04275 2813 aa10.81□□□□□ -0.68
TRIM3-212ENST00000533064 A0A1W2PRE2 83 aa10.8□□□□□ -0.68
TRIM3-212ENST00000533064 M0R036 132 aa10.8□□□□□ -0.68
TRIM3-212ENST00000533064 ATF4P18848 351 aaPredicted RBP10.8□□□□□ -0.68
TRIM3-212ENST00000533064 BTN1A1Q13410 526 aa10.8□□□□□ -0.68
TRIM3-212ENST00000533064 SIGLEC15Q6ZMC9 328 aa10.8□□□□□ -0.68
TRIM3-212ENST00000533064 DYNLRB2Q8TF09 96 aa10.8□□□□□ -0.68
TRIM3-212ENST00000533064 TMEM14CQ9P0S9 112 aa10.8□□□□□ -0.68
TRIM3-212ENST00000533064 NOTCH3Q9UM47 2321 aa10.79□□□□□ -0.68
TRIM3-212ENST00000533064 HELTA6NFD8 242 aa10.79□□□□□ -0.68
TRIM3-212ENST00000533064 ZNF727A8MUV8 499 aa10.79□□□□□ -0.68
TRIM3-212ENST00000533064 PYYP10082 97 aa10.79□□□□□ -0.68
TRIM3-212ENST00000533064 RPL11P62913 178 aaKnown RBP10.79□□□□□ -0.68
TRIM3-212ENST00000533064 RHEBQ15382 184 aa10.79□□□□□ -0.68
TRIM3-212ENST00000533064 LINC00482Q8N8I6 264 aa10.79□□□□□ -0.68
TRIM3-212ENST00000533064 FXYD5Q96DB9 178 aa10.79□□□□□ -0.68
TRIM3-212ENST00000533064 TVP23CQ96ET8 276 aa10.79□□□□□ -0.68
TRIM3-212ENST00000533064 SMIM7Q9BQ49 75 aa10.79□□□□□ -0.68
TRIM3-212ENST00000533064 CSN3P07498 182 aa10.79□□□□□ -0.68
TRIM3-212ENST00000533064 GP9P14770 177 aa10.79□□□□□ -0.68
TRIM3-212ENST00000533064 EDN2P20800 178 aa10.79□□□□□ -0.68
TRIM3-212ENST00000533064 GLMPQ8WWB7 406 aa10.79□□□□□ -0.68
TRIM3-212ENST00000533064 RPUSD4Q96CM3 377 aaKnown RBP10.79□□□□□ -0.68
TRIM3-212ENST00000533064 PARLQ9H300 379 aa10.79□□□□□ -0.68
TRIM3-212ENST00000533064 LOC105371267A0A1B0GV96 52 aa10.78□□□□□ -0.68
TRIM3-212ENST00000533064 ZNF785A8K8V0 405 aa10.78□□□□□ -0.68
TRIM3-212ENST00000533064 SAP30O75446 220 aa10.78□□□□□ -0.68
TRIM3-212ENST00000533064 HIST1H1EP10412 219 aaKnown RBP10.78□□□□□ -0.68
TRIM3-212ENST00000533064 CD33P20138 364 aa10.78□□□□□ -0.68
TRIM3-212ENST00000533064 PNRC1Q12796 327 aaPredicted RBP10.78□□□□□ -0.68
TRIM3-212ENST00000533064 TCF24Q7RTU0 167 aa10.78□□□□□ -0.68
TRIM3-212ENST00000533064 SIGLEC8Q9NYZ4 499 aa10.78□□□□□ -0.68
TRIM3-212ENST00000533064 NAT8Q9UHE5 227 aa10.78□□□□□ -0.68
TRIM3-212ENST00000533064 C7orf77A4D0Y5 90 aa10.77□□□□□ -0.69
TRIM3-212ENST00000533064 NBEAP1P0C6P0 100 aa10.77□□□□□ -0.69
TRIM3-212ENST00000533064 MEOX2P50222 304 aa10.77□□□□□ -0.69
TRIM3-212ENST00000533064 ZNF674Q2M3X9 581 aa10.77□□□□□ -0.69
TRIM3-212ENST00000533064 BLNKQ8WV28 456 aa10.77□□□□□ -0.69
TRIM3-212ENST00000533064 C11orf52Q96A22 123 aa10.77□□□□□ -0.69
TRIM3-212ENST00000533064 MDFIQ99750 246 aa10.77□□□□□ -0.69
TRIM3-212ENST00000533064 SDF2L1Q9HCN8 221 aa10.77□□□□□ -0.69
TRIM3-212ENST00000533064 SCO2A0A1W2PP80 73 aa10.76□□□□□ -0.69
TRIM3-212ENST00000533064 GGTLC3B5MD39 225 aa10.76□□□□□ -0.69
TRIM3-212ENST00000533064 DNASE2O00115 360 aaPredicted RBP10.76□□□□□ -0.69
TRIM3-212ENST00000533064 MRPS12O15235 138 aaKnown RBP10.76□□□□□ -0.69
TRIM3-212ENST00000533064 NDUFB4O95168 129 aa10.76□□□□□ -0.69
TRIM3-212ENST00000533064 TMEM241Q24JQ0 296 aa10.76□□□□□ -0.69
TRIM3-212ENST00000533064 RPS10P5Q9NQ39 176 aa10.76□□□□□ -0.69
TRIM3-212ENST00000533064 MLXQ9UH92 298 aa10.76□□□□□ -0.69
TRIM3-212ENST00000533064 B4DEV8 164 aa10.76□□□□□ -0.69
TRIM3-212ENST00000533064 IGLC2P0DOY2 106 aa10.76□□□□□ -0.69
TRIM3-212ENST00000533064 SUMO1P63165 101 aaKnown RBP10.76□□□□□ -0.69
TRIM3-212ENST00000533064 PAFAH1B2P68402 229 aa10.76□□□□□ -0.69
TRIM3-212ENST00000533064 CTAG1AP78358 180 aa10.76□□□□□ -0.69
TRIM3-212ENST00000533064 PDE6HQ13956 83 aa10.76□□□□□ -0.69
TRIM3-212ENST00000533064 ADAMTSL5Q6ZMM2 481 aa10.76□□□□□ -0.69
TRIM3-212ENST00000533064 RBPMS2Q6ZRY4 209 aaKnown RBP10.76□□□□□ -0.69
TRIM3-212ENST00000533064 MCRIP2Q9BUT9 160 aaKnown RBP10.76□□□□□ -0.69
TRIM3-212ENST00000533064 IGKV3-7A0A075B6H7 116 aa10.75□□□□□ -0.69
TRIM3-212ENST00000533064 A0A087X0K7 114 aa10.75□□□□□ -0.69
TRIM3-212ENST00000533064 SNRPCP09234 159 aaKnown RBP10.75□□□□□ -0.69
TRIM3-212ENST00000533064 TCEAL7Q9BRU2 100 aa10.75□□□□□ -0.69
TRIM3-212ENST00000533064 NRN1Q9NPD7 142 aa10.75□□□□□ -0.69
TRIM3-212ENST00000533064 ZNF586Q9NXT0 402 aa10.75□□□□□ -0.69
TRIM3-212ENST00000533064 SELENOKQ9Y6D0 94 aa10.75□□□□□ -0.69
TRIM3-212ENST00000533064 SMAD5-AS1Q9Y6J3 95 aa10.75□□□□□ -0.69
TRIM3-212ENST00000533064 TRRAPQ9Y4A5 3859 aa10.75□□□□□ -0.69
TRIM3-212ENST00000533064 TRBV19A0A075B6N1 114 aa10.74□□□□□ -0.69
TRIM3-212ENST00000533064 INSL3P51460 131 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms