RNA–Protein interactions for RNA: ENST00000529986.5

CTNND1-223, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-223ENST00000529986 LINC01559Q495D7 138 aa6.22□□□□□ -1.41
CTNND1-223ENST00000529986 Q86TA4 180 aa6.22□□□□□ -1.41
CTNND1-223ENST00000529986 HS3ST6Q96QI5 342 aa6.22□□□□□ -1.41
CTNND1-223ENST00000529986 LIME1Q9H400 295 aa6.22□□□□□ -1.41
CTNND1-223ENST00000529986 GVINP1Q7Z2Y8 2422 aa6.21□□□□□ -1.41
CTNND1-223ENST00000529986 LOC102723996A0A087X1L8 192 aa6.21□□□□□ -1.41
CTNND1-223ENST00000529986 IGHV1-24A0A0C4DH33 117 aa6.21□□□□□ -1.41
CTNND1-223ENST00000529986 RCHY1Q96PM5 261 aa6.21□□□□□ -1.41
CTNND1-223ENST00000529986 TIMM21Q9BVV7 248 aa6.21□□□□□ -1.41
CTNND1-223ENST00000529986 A0A1W2PPM0 123 aa6.21□□□□□ -1.42
CTNND1-223ENST00000529986 IFITM1P13164 125 aa6.21□□□□□ -1.42
CTNND1-223ENST00000529986 VWC2LB2RUY7 222 aa6.21□□□□□ -1.42
CTNND1-223ENST00000529986 B5MCH6 92 aa6.21□□□□□ -1.42
CTNND1-223ENST00000529986 VCYO14598 125 aa6.21□□□□□ -1.42
CTNND1-223ENST00000529986 OVOL1O14753 267 aa6.21□□□□□ -1.42
CTNND1-223ENST00000529986 IGHV1-46P01743 117 aa6.21□□□□□ -1.42
CTNND1-223ENST00000529986 KLRD1Q13241 179 aa6.21□□□□□ -1.42
CTNND1-223ENST00000529986 POU2AF1Q16633 256 aa6.21□□□□□ -1.42
CTNND1-223ENST00000529986 PPDPFLQ8WWR9 84 aa6.21□□□□□ -1.42
CTNND1-223ENST00000529986 C8orf49Q96NF6 230 aa6.21□□□□□ -1.42
CTNND1-223ENST00000529986 TRGV9Q99603 122 aa6.21□□□□□ -1.42
CTNND1-223ENST00000529986 VWA8A3KMH1 1905 aa6.21□□□□□ -1.42
CTNND1-223ENST00000529986 TRGV11A0A075B6L2 103 aa6.21□□□□□ -1.42
CTNND1-223ENST00000529986 E9PLN8 166 aa6.21□□□□□ -1.42
CTNND1-223ENST00000529986 ZNF415Q09FC8 603 aa6.21□□□□□ -1.42
CTNND1-223ENST00000529986 PMVKQ15126 192 aa6.21□□□□□ -1.42
CTNND1-223ENST00000529986 C10orf91Q5T1B1 145 aa6.21□□□□□ -1.42
CTNND1-223ENST00000529986 TMEM200BQ69YZ2 307 aa6.21□□□□□ -1.42
CTNND1-223ENST00000529986 MRPL14Q6P1L8 145 aaKnown RBP6.21□□□□□ -1.42
CTNND1-223ENST00000529986 TMEM219Q86XT9 240 aa6.21□□□□□ -1.42
CTNND1-223ENST00000529986 FAM57AQ8TBR7 257 aa6.21□□□□□ -1.42
CTNND1-223ENST00000529986 INTS1Q8N201 2190 aaKnown RBP6.21□□□□□ -1.42
CTNND1-223ENST00000529986 CCL25O15444 150 aa6.2□□□□□ -1.42
CTNND1-223ENST00000529986 ZNF688P0C7X2 276 aa6.2□□□□□ -1.42
CTNND1-223ENST00000529986 PRDM6Q9NQX0 595 aa6.2□□□□□ -1.42
CTNND1-223ENST00000529986 ZNRD1Q9P1U0 126 aa6.2□□□□□ -1.42
CTNND1-223ENST00000529986 FER1L5A0AVI2 2057 aa6.2□□□□□ -1.42
CTNND1-223ENST00000529986 TRBV20-1A0A075B6N2 111 aa6.2□□□□□ -1.42
CTNND1-223ENST00000529986 IGHV2-26A0A0B4J1V2 119 aa6.2□□□□□ -1.42
CTNND1-223ENST00000529986 FCN3O75636 299 aa6.2□□□□□ -1.42
CTNND1-223ENST00000529986 PRIMA1Q86XR5 153 aa6.2□□□□□ -1.42
CTNND1-223ENST00000529986 FNDC1Q4ZHG4 1894 aaPredicted RBP6.2□□□□□ -1.42
CTNND1-223ENST00000529986 GHRHP01286 108 aa6.2□□□□□ -1.42
CTNND1-223ENST00000529986 SPRR3Q9UBC9 169 aa6.2□□□□□ -1.42
CTNND1-223ENST00000529986 F8W1H4 67 aa6.2□□□□□ -1.42
CTNND1-223ENST00000529986 INS-IGF2F8WCM5 200 aa6.2□□□□□ -1.42
CTNND1-223ENST00000529986 DUSP14O95147 198 aaKnown RBP6.2□□□□□ -1.42
CTNND1-223ENST00000529986 INSP01308 110 aa6.2□□□□□ -1.42
CTNND1-223ENST00000529986 COX8AP10176 69 aa6.2□□□□□ -1.42
CTNND1-223ENST00000529986 LTBRP36941 435 aa6.2□□□□□ -1.42
CTNND1-223ENST00000529986 TRIOBPQ9H2D6 2365 aa6.2□□□□□ -1.42
CTNND1-223ENST00000529986 CADP27708 2225 aa6.2□□□□□ -1.42
CTNND1-223ENST00000529986 PI4KAP42356 2102 aa6.2□□□□□ -1.42
CTNND1-223ENST00000529986 TRAV26-2A0A0B4J265 109 aa6.2□□□□□ -1.42
CTNND1-223ENST00000529986 LEPROTO15243 131 aa6.2□□□□□ -1.42
CTNND1-223ENST00000529986 IGKV1-16P04430 117 aa6.2□□□□□ -1.42
CTNND1-223ENST00000529986 Q6P435 159 aa6.2□□□□□ -1.42
CTNND1-223ENST00000529986 RNASE2P10153 161 aaKnown RBP6.19□□□□□ -1.42
CTNND1-223ENST00000529986 PAX9P55771 341 aa6.19□□□□□ -1.42
CTNND1-223ENST00000529986 RASL10AQ92737 203 aa6.19□□□□□ -1.42
CTNND1-223ENST00000529986 IGKV1-6A0A0C4DH72 117 aa6.19□□□□□ -1.42
CTNND1-223ENST00000529986 SRRM5B3KS81 715 aa6.19□□□□□ -1.42
CTNND1-223ENST00000529986 FGF6P10767 208 aa6.19□□□□□ -1.42
CTNND1-223ENST00000529986 IGHV1-3A0A0C4DH29 117 aa6.19□□□□□ -1.42
CTNND1-223ENST00000529986 H0YJW9 148 aa6.19□□□□□ -1.42
CTNND1-223ENST00000529986 TP53TG1Q9Y2A0 90 aa6.19□□□□□ -1.42
CTNND1-223ENST00000529986 V9GYV3 84 aa6.19□□□□□ -1.42
CTNND1-223ENST00000529986 IGLV3-32A0A0A0MS00 114 aa6.19□□□□□ -1.42
CTNND1-223ENST00000529986 MYMXA0A1B0GTQ4 84 aa6.19□□□□□ -1.42
CTNND1-223ENST00000529986 GGNQ86UU5 652 aa6.19□□□□□ -1.42
CTNND1-223ENST00000529986 WNT2P09544 360 aa6.18□□□□□ -1.42
CTNND1-223ENST00000529986 C6orf226Q5I0X4 101 aa6.18□□□□□ -1.42
CTNND1-223ENST00000529986 SPTBN1Q01082 2364 aaKnown RBP6.18□□□□□ -1.42
CTNND1-223ENST00000529986 TRGV1A0A0A0MS02 117 aa6.18□□□□□ -1.42
CTNND1-223ENST00000529986 SAP30O75446 220 aa6.18□□□□□ -1.42
CTNND1-223ENST00000529986 VDAC2P45880 294 aaPredicted RBP6.18□□□□□ -1.42
CTNND1-223ENST00000529986 CDKN1BP46527 198 aa6.18□□□□□ -1.42
CTNND1-223ENST00000529986 IGHV1-8P0DP01 117 aa6.18□□□□□ -1.42
CTNND1-223ENST00000529986 NEGR1Q7Z3B1 354 aa6.18□□□□□ -1.42
CTNND1-223ENST00000529986 LINC00477Q96M19 166 aa6.18□□□□□ -1.42
CTNND1-223ENST00000529986 PEMTQ9UBM1 199 aa6.18□□□□□ -1.42
CTNND1-223ENST00000529986 KLF2Q9Y5W3 355 aaPredicted RBP6.18□□□□□ -1.42
CTNND1-223ENST00000529986 FANCMQ8IYD8 2048 aa6.18□□□□□ -1.42
CTNND1-223ENST00000529986 ABCA7Q8IZY2 2146 aa6.18□□□□□ -1.42
CTNND1-223ENST00000529986 IGLV3-12A0A075B6K2 115 aa6.18□□□□□ -1.42
CTNND1-223ENST00000529986 YPEL3P61236 119 aaPredicted RBP6.18□□□□□ -1.42
CTNND1-223ENST00000529986 NEU4Q8WWR8 484 aaPredicted RBP6.18□□□□□ -1.42
CTNND1-223ENST00000529986 FAM168AQ92567 244 aa6.18□□□□□ -1.42
CTNND1-223ENST00000529986 ZDBF2Q9HCK1 2354 aa6.18□□□□□ -1.42
CTNND1-223ENST00000529986 TRAV12-1A0A0B4J245 112 aa6.18□□□□□ -1.42
CTNND1-223ENST00000529986 TRAV41A0A0B4J266 112 aa6.18□□□□□ -1.42
CTNND1-223ENST00000529986 KNCNA6PVL3 124 aa6.18□□□□□ -1.42
CTNND1-223ENST00000529986 PRB1P04280 392 aa6.18□□□□□ -1.42
CTNND1-223ENST00000529986 FAM104BQ5XKR9 115 aa6.18□□□□□ -1.42
CTNND1-223ENST00000529986 RNASE8Q8TDE3 154 aaKnown RBP6.18□□□□□ -1.42
CTNND1-223ENST00000529986 GFRA4Q9GZZ7 299 aa6.18□□□□□ -1.42
CTNND1-223ENST00000529986 MRPS18CQ9Y3D5 142 aaKnown RBP6.18□□□□□ -1.42
CTNND1-223ENST00000529986 PHF3Q92576 2039 aaKnown RBP6.18□□□□□ -1.42
CTNND1-223ENST00000529986 NLRC5Q86WI3 1866 aa6.17□□□□□ -1.42
CTNND1-223ENST00000529986 CACNA1EQ15878 2313 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms