RNA–Protein interactions for RNA: ENST00000529563.5

USH1C-208, Transcript of USH1 protein network component harmonin, humanhuman

TSL 2

Gene USH1C, Length 942 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-208ENST00000529563 C4BPBP20851 252 aa8.81□□□□□ -1
USH1C-208ENST00000529563 RPL29P47914 159 aaKnown RBP8.81□□□□□ -1
USH1C-208ENST00000529563 SAMD13Q5VXD3 122 aa8.81□□□□□ -1
USH1C-208ENST00000529563 LINC00305Q7Z4B0 112 aa8.81□□□□□ -1
USH1C-208ENST00000529563 NPCDR1Q9BY65 106 aa8.81□□□□□ -1
USH1C-208ENST00000529563 SLC25A39Q9BZJ4 359 aaPredicted RBP8.81□□□□□ -1
USH1C-208ENST00000529563 WDR61Q9GZS3 305 aaKnown RBP8.81□□□□□ -1
USH1C-208ENST00000529563 DNAJC4Q9NNZ3 241 aa8.81□□□□□ -1
USH1C-208ENST00000529563 NRN1Q9NPD7 142 aa8.81□□□□□ -1
USH1C-208ENST00000529563 SLC39A9Q9NUM3 307 aa8.81□□□□□ -1
USH1C-208ENST00000529563 ZNF705EA8MWA4 302 aaPredicted RBP8.8□□□□□ -1
USH1C-208ENST00000529563 ARPC5O15511 151 aa8.8□□□□□ -1
USH1C-208ENST00000529563 MEOX2P50222 304 aa8.8□□□□□ -1
USH1C-208ENST00000529563 OPCMLQ14982 345 aa8.8□□□□□ -1
USH1C-208ENST00000529563 TMEM182Q6ZP80 229 aaPredicted RBP8.8□□□□□ -1
USH1C-208ENST00000529563 ZNF767PQ75MW2 155 aa8.8□□□□□ -1
USH1C-208ENST00000529563 GLMPQ8WWB7 406 aa8.8□□□□□ -1
USH1C-208ENST00000529563 AQP10Q96PS8 301 aa8.8□□□□□ -1
USH1C-208ENST00000529563 U3KQE9 123 aa8.8□□□□□ -1
USH1C-208ENST00000529563 GIG44P09565 113 aaPredicted RBP8.79□□□□□ -1
USH1C-208ENST00000529563 P0DMU3 169 aa8.79□□□□□ -1
USH1C-208ENST00000529563 FAM231AP0DMU4 169 aa8.79□□□□□ -1
USH1C-208ENST00000529563 FAM231CP0DMU5 169 aa8.79□□□□□ -1
USH1C-208ENST00000529563 PLP1P60201 277 aa8.79□□□□□ -1
USH1C-208ENST00000529563 LINC00336Q6ZUF6 198 aa8.79□□□□□ -1
USH1C-208ENST00000529563 BPIFA4PQ86YQ2 179 aa8.79□□□□□ -1
USH1C-208ENST00000529563 DCANP1Q8TF63 244 aa8.79□□□□□ -1
USH1C-208ENST00000529563 C16orf92Q96LL3 132 aa8.79□□□□□ -1
USH1C-208ENST00000529563 UHRF2Q96PU4 802 aa8.79□□□□□ -1
USH1C-208ENST00000529563 SHANK2-AS3Q9BTD1 123 aa8.79□□□□□ -1
USH1C-208ENST00000529563 RSG1Q9BU20 258 aa8.79□□□□□ -1
USH1C-208ENST00000529563 NDUFAF3Q9BU61 184 aa8.79□□□□□ -1
USH1C-208ENST00000529563 SCRT1Q9BWW7 348 aa8.79□□□□□ -1
USH1C-208ENST00000529563 XCL2Q9UBD3 114 aa8.79□□□□□ -1
USH1C-208ENST00000529563 X6R8D5 127 aa8.79□□□□□ -1
USH1C-208ENST00000529563 IGHV3OR16-12A0A075B7B8 117 aa8.78□□□□□ -1
USH1C-208ENST00000529563 H3BRN7 92 aa8.78□□□□□ -1
USH1C-208ENST00000529563 TAAR5O14804 337 aa8.78□□□□□ -1
USH1C-208ENST00000529563 PFDN1O60925 122 aa8.78□□□□□ -1
USH1C-208ENST00000529563 EMP1P54849 157 aa8.78□□□□□ -1
USH1C-208ENST00000529563 Q5BKY6 102 aa8.78□□□□□ -1
USH1C-208ENST00000529563 FFAR4Q5NUL3 377 aa8.78□□□□□ -1
USH1C-208ENST00000529563 Q6ZNX1 250 aa8.78□□□□□ -1
USH1C-208ENST00000529563 AKAP14Q86UN6 197 aa8.78□□□□□ -1
USH1C-208ENST00000529563 UBE2DNLQ8IWF7 75 aa8.78□□□□□ -1
USH1C-208ENST00000529563 LINC00052Q96N35 136 aa8.78□□□□□ -1
USH1C-208ENST00000529563 SLC25A32Q9H2D1 315 aa8.78□□□□□ -1
USH1C-208ENST00000529563 TNFSF18Q9UNG2 199 aa8.78□□□□□ -1
USH1C-208ENST00000529563 A0A1W2PPV4 95 aa8.77□□□□□ -1.01
USH1C-208ENST00000529563 SMLR1H3BR10 107 aa8.77□□□□□ -1.01
USH1C-208ENST00000529563 M0R2N4 97 aa8.77□□□□□ -1.01
USH1C-208ENST00000529563 ACOT6Q3I5F7 207 aaPredicted RBP8.77□□□□□ -1.01
USH1C-208ENST00000529563 FAM78BQ5VT40 261 aa8.77□□□□□ -1.01
USH1C-208ENST00000529563 HSD17B11Q8NBQ5 300 aa8.77□□□□□ -1.01
USH1C-208ENST00000529563 CHAC2Q8WUX2 184 aa8.77□□□□□ -1.01
USH1C-208ENST00000529563 CELA1Q9UNI1 258 aa8.77□□□□□ -1.01
USH1C-208ENST00000529563 AGRNO00468 2067 aa8.77□□□□□ -1.01
USH1C-208ENST00000529563 A0A0D9SG52 128 aa8.76□□□□□ -1.01
USH1C-208ENST00000529563 KANTRA0A1W2PQU2 76 aa8.76□□□□□ -1.01
USH1C-208ENST00000529563 IGKV3-20P01619 116 aa8.76□□□□□ -1.01
USH1C-208ENST00000529563 TAS2R45P59539 299 aa8.76□□□□□ -1.01
USH1C-208ENST00000529563 RHOBP62745 196 aa8.76□□□□□ -1.01
USH1C-208ENST00000529563 C12orf74Q32Q52 190 aa8.76□□□□□ -1.01
USH1C-208ENST00000529563 POM121L12Q8N7R1 296 aa8.76□□□□□ -1.01
USH1C-208ENST00000529563 GNPNAT1Q96EK6 184 aaPredicted RBP8.76□□□□□ -1.01
USH1C-208ENST00000529563 PARD6GQ9BYG4 376 aaPredicted RBP8.76□□□□□ -1.01
USH1C-208ENST00000529563 TMEM189A5PLL7 270 aa8.75□□□□□ -1.01
USH1C-208ENST00000529563 MBP02144 154 aa8.75□□□□□ -1.01
USH1C-208ENST00000529563 AMBPP02760 352 aa8.75□□□□□ -1.01
USH1C-208ENST00000529563 SPART-AS1P0CW21 52 aa8.75□□□□□ -1.01
USH1C-208ENST00000529563 PSMB3P49720 205 aa8.75□□□□□ -1.01
USH1C-208ENST00000529563 FXYD7P58549 80 aa8.75□□□□□ -1.01
USH1C-208ENST00000529563 EIF5AP63241 154 aaKnown RBP8.75□□□□□ -1.01
USH1C-208ENST00000529563 EBLN2Q6P2I7 272 aa8.75□□□□□ -1.01
USH1C-208ENST00000529563 PATE2Q6UY27 113 aa8.75□□□□□ -1.01
USH1C-208ENST00000529563 CSNK1G2-AS1Q8NCQ2 148 aa8.75□□□□□ -1.01
USH1C-208ENST00000529563 TMEM37Q8WXS4 190 aa8.75□□□□□ -1.01
USH1C-208ENST00000529563 ARPC5LQ9BPX5 153 aa8.75□□□□□ -1.01
USH1C-208ENST00000529563 MRPL32Q9BYC8 188 aaKnown RBP8.75□□□□□ -1.01
USH1C-208ENST00000529563 RPRMQ9NS64 109 aa8.75□□□□□ -1.01
USH1C-208ENST00000529563 TIMM9Q9Y5J7 89 aa8.75□□□□□ -1.01
USH1C-208ENST00000529563 DNAH10Q8IVF4 4471 aa8.75□□□□□ -1.01
USH1C-208ENST00000529563 HECTD4Q9Y4D8 3996 aa8.74□□□□□ -1.01
USH1C-208ENST00000529563 PRSS29PA6NIE9 313 aa8.74□□□□□ -1.01
USH1C-208ENST00000529563 HMSDA8MTL9 139 aa8.74□□□□□ -1.01
USH1C-208ENST00000529563 H3BMM0 161 aa8.74□□□□□ -1.01
USH1C-208ENST00000529563 ISLRO14498 428 aa8.74□□□□□ -1.01
USH1C-208ENST00000529563 OR7C2O60412 319 aa8.74□□□□□ -1.01
USH1C-208ENST00000529563 HLA-DRB4P13762 266 aa8.74□□□□□ -1.01
USH1C-208ENST00000529563 HTN3P15516 51 aa8.74□□□□□ -1.01
USH1C-208ENST00000529563 GUK1Q16774 197 aa8.74□□□□□ -1.01
USH1C-208ENST00000529563 LCN15Q6UWW0 184 aa8.74□□□□□ -1.01
USH1C-208ENST00000529563 OR4B1Q8NGF8 309 aa8.74□□□□□ -1.01
USH1C-208ENST00000529563 WFDC1Q9HC57 220 aa8.74□□□□□ -1.01
USH1C-208ENST00000529563 SEPSECSQ9HD40 501 aaKnown RBP8.74□□□□□ -1.01
USH1C-208ENST00000529563 PPP1R14DQ9NXH3 145 aa8.74□□□□□ -1.01
USH1C-208ENST00000529563 HLA-DRB4X5D2U9 266 aa8.74□□□□□ -1.01
USH1C-208ENST00000529563 TEX48A0A1B0GUV7 120 aa8.73□□□□□ -1.01
USH1C-208ENST00000529563 RNF222A6NCQ9 220 aa8.73□□□□□ -1.01
USH1C-208ENST00000529563 M6PRP20645 277 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms