RNA–Protein interactions for RNA: ENST00000527253.2

PRPF40B-204, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-204ENST00000527253 BCAP31P51572 246 aa7.42□□□□□ -1.22
PRPF40B-204ENST00000527253 VAMP2P63027 116 aa7.42□□□□□ -1.22
PRPF40B-204ENST00000527253 IFITM3Q01628 133 aa7.42□□□□□ -1.22
PRPF40B-204ENST00000527253 ASAH1Q13510 395 aa7.42□□□□□ -1.22
PRPF40B-204ENST00000527253 PSG3Q16557 428 aa7.42□□□□□ -1.22
PRPF40B-204ENST00000527253 LINC00305Q7Z4B0 112 aa7.42□□□□□ -1.22
PRPF40B-204ENST00000527253 ZNF546Q86UE3 836 aa7.42□□□□□ -1.22
PRPF40B-204ENST00000527253 ZNF738Q8NE65 137 aa7.42□□□□□ -1.22
PRPF40B-204ENST00000527253 YTHDF2Q9Y5A9 579 aaKnown RBP7.42□□□□□ -1.22
PRPF40B-204ENST00000527253 DNAH6Q9C0G6 4158 aa7.42□□□□□ -1.22
PRPF40B-204ENST00000527253 TRAV12-2A0A075B6T6 113 aa7.41□□□□□ -1.22
PRPF40B-204ENST00000527253 TRAV5A0A0B4J249 113 aa7.41□□□□□ -1.22
PRPF40B-204ENST00000527253 FAM240BA0A1B0GVZ2 78 aa7.41□□□□□ -1.22
PRPF40B-204ENST00000527253 SLC17A3O00476 420 aa7.41□□□□□ -1.22
PRPF40B-204ENST00000527253 HBE1P02100 147 aa7.41□□□□□ -1.22
PRPF40B-204ENST00000527253 AZU1P20160 251 aa7.41□□□□□ -1.22
PRPF40B-204ENST00000527253 CAV2P51636 162 aa7.41□□□□□ -1.22
PRPF40B-204ENST00000527253 HIST1H1AQ02539 215 aaPredicted RBP7.41□□□□□ -1.22
PRPF40B-204ENST00000527253 RAB32Q13637 225 aa7.41□□□□□ -1.22
PRPF40B-204ENST00000527253 OPCMLQ14982 345 aa7.41□□□□□ -1.22
PRPF40B-204ENST00000527253 RRN3P1Q2M238 152 aa7.41□□□□□ -1.22
PRPF40B-204ENST00000527253 VWC2Q2TAL6 325 aa7.41□□□□□ -1.22
PRPF40B-204ENST00000527253 PXDC1Q5TGL8 231 aa7.41□□□□□ -1.22
PRPF40B-204ENST00000527253 MIC13Q5XKP0 118 aa7.41□□□□□ -1.22
PRPF40B-204ENST00000527253 LINC00299Q6ZSB3 139 aa7.41□□□□□ -1.22
PRPF40B-204ENST00000527253 BAP18Q8IXM2 172 aa7.41□□□□□ -1.22
PRPF40B-204ENST00000527253 TMEM252Q8N6L7 170 aa7.41□□□□□ -1.22
PRPF40B-204ENST00000527253 OR8A1Q8NGG7 326 aa7.41□□□□□ -1.22
PRPF40B-204ENST00000527253 NIPSNAP3BQ9BS92 247 aa7.41□□□□□ -1.22
PRPF40B-204ENST00000527253 WDR83OSQ9Y284 106 aa7.41□□□□□ -1.22
PRPF40B-204ENST00000527253 PLAC8L1A1L4L8 177 aa7.4□□□□□ -1.22
PRPF40B-204ENST00000527253 PRAC2D3DTV9 90 aa7.4□□□□□ -1.22
PRPF40B-204ENST00000527253 H3BQ15 152 aa7.4□□□□□ -1.22
PRPF40B-204ENST00000527253 COX7A2P2O60397 106 aa7.4□□□□□ -1.22
PRPF40B-204ENST00000527253 SIX6O95475 246 aa7.4□□□□□ -1.22
PRPF40B-204ENST00000527253 IGLC2P0DOY2 106 aa7.4□□□□□ -1.22
PRPF40B-204ENST00000527253 CAMLGP49069 296 aa7.4□□□□□ -1.22
PRPF40B-204ENST00000527253 S100A10P60903 97 aa7.4□□□□□ -1.22
PRPF40B-204ENST00000527253 OXA1LQ15070 435 aa7.4□□□□□ -1.22
PRPF40B-204ENST00000527253 NRARPQ7Z6K4 114 aa7.4□□□□□ -1.22
PRPF40B-204ENST00000527253 RPUSD4Q96CM3 377 aaKnown RBP7.4□□□□□ -1.22
PRPF40B-204ENST00000527253 ZNF331Q9NQX6 463 aaPredicted RBP7.4□□□□□ -1.22
PRPF40B-204ENST00000527253 LYRM2Q9NU23 88 aaPredicted RBP7.4□□□□□ -1.22
PRPF40B-204ENST00000527253 BOLA2-SMG1P6H3BVE0 249 aa7.39□□□□□ -1.23
PRPF40B-204ENST00000527253 UPK1BO75841 260 aa7.39□□□□□ -1.23
PRPF40B-204ENST00000527253 INSP01308 110 aa7.39□□□□□ -1.23
PRPF40B-204ENST00000527253 CXCL2P19875 107 aa7.39□□□□□ -1.23
PRPF40B-204ENST00000527253 SULT1A1P50225 295 aa7.39□□□□□ -1.23
PRPF40B-204ENST00000527253 RHOBP62745 196 aa7.39□□□□□ -1.23
PRPF40B-204ENST00000527253 KIR3DS1Q14943 382 aa7.39□□□□□ -1.23
PRPF40B-204ENST00000527253 FCN2Q15485 313 aa7.39□□□□□ -1.23
PRPF40B-204ENST00000527253 C10orf113Q5VZT2 155 aa7.39□□□□□ -1.23
PRPF40B-204ENST00000527253 MZT2BQ6NZ67 158 aa7.39□□□□□ -1.23
PRPF40B-204ENST00000527253 LRRC20Q8TCA0 184 aa7.39□□□□□ -1.23
PRPF40B-204ENST00000527253 S100ZQ8WXG8 99 aa7.39□□□□□ -1.23
PRPF40B-204ENST00000527253 SAT2Q96F10 170 aaPredicted RBP7.39□□□□□ -1.23
PRPF40B-204ENST00000527253 TMEM208Q9BTX3 173 aa7.39□□□□□ -1.23
PRPF40B-204ENST00000527253 NDUFAF3Q9BU61 184 aa7.39□□□□□ -1.23
PRPF40B-204ENST00000527253 PARD6GQ9BYG4 376 aaPredicted RBP7.39□□□□□ -1.23
PRPF40B-204ENST00000527253 DNAJC4Q9NNZ3 241 aa7.39□□□□□ -1.23
PRPF40B-204ENST00000527253 UQCC1Q9NVA1 299 aa7.39□□□□□ -1.23
PRPF40B-204ENST00000527253 HTN3P15516 51 aa7.38□□□□□ -1.23
PRPF40B-204ENST00000527253 RPL29P47914 159 aaKnown RBP7.38□□□□□ -1.23
PRPF40B-204ENST00000527253 LCN15Q6UWW0 184 aa7.38□□□□□ -1.23
PRPF40B-204ENST00000527253 S100A7AQ86SG5 101 aa7.38□□□□□ -1.23
PRPF40B-204ENST00000527253 BPIFA4PQ86YQ2 179 aa7.38□□□□□ -1.23
PRPF40B-204ENST00000527253 POM121L12Q8N7R1 296 aa7.38□□□□□ -1.23
PRPF40B-204ENST00000527253 CHAC2Q8WUX2 184 aa7.38□□□□□ -1.23
PRPF40B-204ENST00000527253 SLC39A9Q9NUM3 307 aa7.38□□□□□ -1.23
PRPF40B-204ENST00000527253 ZNF586Q9NXT0 402 aa7.38□□□□□ -1.23
PRPF40B-204ENST00000527253 UBE2L5PA0A1B0GUS4 154 aa7.37□□□□□ -1.23
PRPF40B-204ENST00000527253 TEX48A0A1B0GUV7 120 aa7.37□□□□□ -1.23
PRPF40B-204ENST00000527253 H0YIZ8 118 aa7.37□□□□□ -1.23
PRPF40B-204ENST00000527253 PVALBP20472 110 aaPredicted RBP7.37□□□□□ -1.23
PRPF40B-204ENST00000527253 TSPOP30536 169 aa7.37□□□□□ -1.23
PRPF40B-204ENST00000527253 S100A11P31949 105 aa7.37□□□□□ -1.23
PRPF40B-204ENST00000527253 NHLH2Q02577 135 aa7.37□□□□□ -1.23
PRPF40B-204ENST00000527253 GCSAMLQ5JQS6 135 aa7.37□□□□□ -1.23
PRPF40B-204ENST00000527253 FAM210BQ96KR6 192 aa7.37□□□□□ -1.23
PRPF40B-204ENST00000527253 LINC01587Q99440 93 aa7.37□□□□□ -1.23
PRPF40B-204ENST00000527253 SLC50A1Q9BRV3 221 aa7.37□□□□□ -1.23
PRPF40B-204ENST00000527253 RNF24Q9Y225 148 aa7.37□□□□□ -1.23
PRPF40B-204ENST00000527253 NDUFB4O95168 129 aa7.36□□□□□ -1.23
PRPF40B-204ENST00000527253 P0DMU3 169 aa7.36□□□□□ -1.23
PRPF40B-204ENST00000527253 FAM231AP0DMU4 169 aa7.36□□□□□ -1.23
PRPF40B-204ENST00000527253 FAM231CP0DMU5 169 aa7.36□□□□□ -1.23
PRPF40B-204ENST00000527253 FGF7P21781 194 aa7.36□□□□□ -1.23
PRPF40B-204ENST00000527253 CDKN1BP46527 198 aa7.36□□□□□ -1.23
PRPF40B-204ENST00000527253 B2MP61769 119 aa7.36□□□□□ -1.23
PRPF40B-204ENST00000527253 DAD1P61803 113 aa7.36□□□□□ -1.23
PRPF40B-204ENST00000527253 BAXQ07812 192 aa7.36□□□□□ -1.23
PRPF40B-204ENST00000527253 RAB31Q13636 194 aa7.36□□□□□ -1.23
PRPF40B-204ENST00000527253 TMEM88Q6PEY1 159 aa7.36□□□□□ -1.23
PRPF40B-204ENST00000527253 Q6ZRG5 221 aa7.36□□□□□ -1.23
PRPF40B-204ENST00000527253 OR1L4Q8NGR5 311 aa7.36□□□□□ -1.23
PRPF40B-204ENST00000527253 ENKURQ8TC29 256 aa7.36□□□□□ -1.23
PRPF40B-204ENST00000527253 GPN1Q9HCN4 374 aaPredicted RBP7.36□□□□□ -1.23
PRPF40B-204ENST00000527253 PPP1R14DQ9NXH3 145 aa7.36□□□□□ -1.23
PRPF40B-204ENST00000527253 OR5AC2Q9NZP5 309 aa7.36□□□□□ -1.23
PRPF40B-204ENST00000527253 PXMP4Q9Y6I8 212 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms