RNA–Protein interactions for RNA: ENST00000527237.1

TRIM3-205, Transcript of tripartite motif containing 3, humanhuman

TSL 1 (best)

Gene TRIM3, Length 339 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-205ENST00000527237 A8MTW9 85 aa13.09□□□□□ -0.31
TRIM3-205ENST00000527237 SLC17A3O00476 420 aa13.09□□□□□ -0.31
TRIM3-205ENST00000527237 MIFP14174 115 aa13.09□□□□□ -0.31
TRIM3-205ENST00000527237 CXCL3P19876 107 aa13.09□□□□□ -0.31
TRIM3-205ENST00000527237 B2MP61769 119 aa13.09□□□□□ -0.31
TRIM3-205ENST00000527237 CLINT1Q14677 625 aa13.09□□□□□ -0.31
TRIM3-205ENST00000527237 CEMP1Q6PRD7 247 aaPredicted RBP13.09□□□□□ -0.31
TRIM3-205ENST00000527237 ZNF738Q8NE65 137 aa13.09□□□□□ -0.31
TRIM3-205ENST00000527237 CLUHP3Q96NS8 147 aa13.09□□□□□ -0.31
TRIM3-205ENST00000527237 MFFQ9GZY8 342 aa13.09□□□□□ -0.31
TRIM3-205ENST00000527237 SLC39A9Q9NUM3 307 aa13.09□□□□□ -0.31
TRIM3-205ENST00000527237 IGHV3OR16-12A0A075B7B8 117 aa13.08□□□□□ -0.32
TRIM3-205ENST00000527237 MPC2O95563 127 aa13.08□□□□□ -0.32
TRIM3-205ENST00000527237 RLN2P04090 185 aa13.08□□□□□ -0.32
TRIM3-205ENST00000527237 RPL29P47914 159 aaKnown RBP13.08□□□□□ -0.32
TRIM3-205ENST00000527237 CNN1P51911 297 aaKnown RBP13.08□□□□□ -0.32
TRIM3-205ENST00000527237 CYCSP99999 105 aaKnown RBP13.08□□□□□ -0.32
TRIM3-205ENST00000527237 PSG9Q00887 426 aa13.08□□□□□ -0.32
TRIM3-205ENST00000527237 RAB31Q13636 194 aa13.08□□□□□ -0.32
TRIM3-205ENST00000527237 SPATA31B1PQ5VZV4 182 aa13.08□□□□□ -0.32
TRIM3-205ENST00000527237 ZNF705AQ6ZN79 300 aaPredicted RBP13.08□□□□□ -0.32
TRIM3-205ENST00000527237 RNF126Q9BV68 326 aa13.08□□□□□ -0.32
TRIM3-205ENST00000527237 NPCDR1Q9BY65 106 aa13.08□□□□□ -0.32
TRIM3-205ENST00000527237 PTTG1O95997 202 aa13.07□□□□□ -0.32
TRIM3-205ENST00000527237 IGLC2P0DOY2 106 aa13.07□□□□□ -0.32
TRIM3-205ENST00000527237 ATP6V1FQ16864 119 aa13.07□□□□□ -0.32
TRIM3-205ENST00000527237 GCSAMLQ5JQS6 135 aa13.07□□□□□ -0.32
TRIM3-205ENST00000527237 Q6ZRG5 221 aa13.07□□□□□ -0.32
TRIM3-205ENST00000527237 SLC25A31Q9H0C2 315 aa13.07□□□□□ -0.32
TRIM3-205ENST00000527237 DNAJC4Q9NNZ3 241 aa13.07□□□□□ -0.32
TRIM3-205ENST00000527237 ZNF705FA8MVS1 300 aaPredicted RBP13.06□□□□□ -0.32
TRIM3-205ENST00000527237 H3BQ15 152 aa13.06□□□□□ -0.32
TRIM3-205ENST00000527237 JTBO76095 146 aa13.06□□□□□ -0.32
TRIM3-205ENST00000527237 SPINK13Q1W4C9 94 aa13.06□□□□□ -0.32
TRIM3-205ENST00000527237 LCN15Q6UWW0 184 aa13.06□□□□□ -0.32
TRIM3-205ENST00000527237 S100A7AQ86SG5 101 aa13.06□□□□□ -0.32
TRIM3-205ENST00000527237 BPIFA4PQ86YQ2 179 aa13.06□□□□□ -0.32
TRIM3-205ENST00000527237 C1orf158Q8N1D5 194 aa13.06□□□□□ -0.32
TRIM3-205ENST00000527237 OR11H7Q8NGC8 314 aa13.06□□□□□ -0.32
TRIM3-205ENST00000527237 ZNF331Q9NQX6 463 aaPredicted RBP13.06□□□□□ -0.32
TRIM3-205ENST00000527237 MBD2Q9UBB5 411 aa13.06□□□□□ -0.32
TRIM3-205ENST00000527237 M0R2Z0 102 aa13.05□□□□□ -0.32
TRIM3-205ENST00000527237 HIST1H1AQ02539 215 aaPredicted RBP13.05□□□□□ -0.32
TRIM3-205ENST00000527237 PSG3Q16557 428 aa13.05□□□□□ -0.32
TRIM3-205ENST00000527237 ZNF767PQ75MW2 155 aa13.05□□□□□ -0.32
TRIM3-205ENST00000527237 OR1L4Q8NGR5 311 aa13.05□□□□□ -0.32
TRIM3-205ENST00000527237 LRRC20Q8TCA0 184 aa13.05□□□□□ -0.32
TRIM3-205ENST00000527237 CHAC2Q8WUX2 184 aa13.05□□□□□ -0.32
TRIM3-205ENST00000527237 PFDN5Q99471 154 aa13.05□□□□□ -0.32
TRIM3-205ENST00000527237 MPDU1O75352 247 aa13.04□□□□□ -0.32
TRIM3-205ENST00000527237 BAP18Q8IXM2 172 aa13.04□□□□□ -0.32
TRIM3-205ENST00000527237 OR8A1Q8NGG7 326 aa13.04□□□□□ -0.32
TRIM3-205ENST00000527237 LINC00476Q8WZB0 136 aa13.04□□□□□ -0.32
TRIM3-205ENST00000527237 SMIM3Q9BZL3 60 aa13.04□□□□□ -0.32
TRIM3-205ENST00000527237 WDR61Q9GZS3 305 aaKnown RBP13.04□□□□□ -0.32
TRIM3-205ENST00000527237 HSPB11Q9Y547 144 aa13.04□□□□□ -0.32
TRIM3-205ENST00000527237 CRXO43186 299 aaPredicted RBP13.03□□□□□ -0.32
TRIM3-205ENST00000527237 DUSP14O95147 198 aaKnown RBP13.03□□□□□ -0.32
TRIM3-205ENST00000527237 CXCL2P19875 107 aa13.03□□□□□ -0.32
TRIM3-205ENST00000527237 FCN2Q15485 313 aa13.03□□□□□ -0.32
TRIM3-205ENST00000527237 Q6ZTC4 211 aa13.03□□□□□ -0.32
TRIM3-205ENST00000527237 RPUSD4Q96CM3 377 aaKnown RBP13.03□□□□□ -0.32
TRIM3-205ENST00000527237 SLC50A1Q9BRV3 221 aa13.03□□□□□ -0.32
TRIM3-205ENST00000527237 HRH4Q9H3N8 390 aa13.03□□□□□ -0.32
TRIM3-205ENST00000527237 ZNF586Q9NXT0 402 aa13.03□□□□□ -0.32
TRIM3-205ENST00000527237 RNF24Q9Y225 148 aa13.03□□□□□ -0.32
TRIM3-205ENST00000527237 PRAC2D3DTV9 90 aa13.02□□□□□ -0.33
TRIM3-205ENST00000527237 PET100P0DJ07 73 aa13.02□□□□□ -0.33
TRIM3-205ENST00000527237 PYYP10082 97 aa13.02□□□□□ -0.33
TRIM3-205ENST00000527237 SAT2Q96F10 170 aaPredicted RBP13.02□□□□□ -0.33
TRIM3-205ENST00000527237 NEU1Q99519 415 aa13.02□□□□□ -0.33
TRIM3-205ENST00000527237 ATP5SQ99766 215 aa13.02□□□□□ -0.33
TRIM3-205ENST00000527237 KLK5Q9Y337 293 aaPredicted RBP13.02□□□□□ -0.33
TRIM3-205ENST00000527237 TRAV12-2A0A075B6T6 113 aa13.01□□□□□ -0.33
TRIM3-205ENST00000527237 BOLA2-SMG1P6H3BVE0 249 aa13.01□□□□□ -0.33
TRIM3-205ENST00000527237 PRM2P04554 102 aa13.01□□□□□ -0.33
TRIM3-205ENST00000527237 RPL12P30050 165 aaKnown RBP13.01□□□□□ -0.33
TRIM3-205ENST00000527237 EMP1P54849 157 aa13.01□□□□□ -0.33
TRIM3-205ENST00000527237 MIR17HGQ75NE6 70 aa13.01□□□□□ -0.33
TRIM3-205ENST00000527237 IGF2BP2-AS1Q96M15 143 aa13.01□□□□□ -0.33
TRIM3-205ENST00000527237 SLC25A2Q9BXI2 301 aa13.01□□□□□ -0.33
TRIM3-205ENST00000527237 PARD6GQ9BYG4 376 aaPredicted RBP13.01□□□□□ -0.33
TRIM3-205ENST00000527237 GOLT1BQ9Y3E0 138 aa13.01□□□□□ -0.33
TRIM3-205ENST00000527237 RFNGQ9Y644 331 aa13.01□□□□□ -0.33
TRIM3-205ENST00000527237 C12orf74Q32Q52 190 aa13□□□□□ -0.33
TRIM3-205ENST00000527237 WFDC1Q9HC57 220 aa13□□□□□ -0.33
TRIM3-205ENST00000527237 LY6G6CO95867 125 aa12.99□□□□□ -0.33
TRIM3-205ENST00000527237 INSP01308 110 aa12.99□□□□□ -0.33
TRIM3-205ENST00000527237 RHOBP62745 196 aa12.99□□□□□ -0.33
TRIM3-205ENST00000527237 FAM167A-AS1Q96KT0 104 aa12.99□□□□□ -0.33
TRIM3-205ENST00000527237 NDUFB4O95168 129 aa12.98□□□□□ -0.33
TRIM3-205ENST00000527237 KIR3DS1Q14943 382 aa12.98□□□□□ -0.33
TRIM3-205ENST00000527237 MED28Q9H204 178 aa12.98□□□□□ -0.33
TRIM3-205ENST00000527237 TMEM14CQ9P0S9 112 aa12.98□□□□□ -0.33
TRIM3-205ENST00000527237 TRBV19A0A075B6N1 114 aa12.97□□□□□ -0.33
TRIM3-205ENST00000527237 LOC102723971A0A1B0GUV8 181 aa12.97□□□□□ -0.33
TRIM3-205ENST00000527237 SMIM9A6NGZ8 99 aa12.97□□□□□ -0.33
TRIM3-205ENST00000527237 M0R3E3 92 aa12.97□□□□□ -0.33
TRIM3-205ENST00000527237 EIF3GO75821 320 aaKnown RBP eCLIP12.97□□□□□ -0.33
TRIM3-205ENST00000527237 HBE1P02100 147 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms