RNA–Protein interactions for RNA: ENST00000526877.1

SSSCA1-203, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-203ENST00000526877 TOR2AQ5JU69 321 aa9.62□□□□□ -0.87
SSSCA1-203ENST00000526877 UQCC3Q6UW78 93 aa9.62□□□□□ -0.87
SSSCA1-203ENST00000526877 C16orf54Q6UWD8 224 aa9.62□□□□□ -0.87
SSSCA1-203ENST00000526877 FXYD5Q96DB9 178 aa9.62□□□□□ -0.87
SSSCA1-203ENST00000526877 MCRIP2Q9BUT9 160 aaKnown RBP9.62□□□□□ -0.87
SSSCA1-203ENST00000526877 VAX2Q9UIW0 290 aa9.62□□□□□ -0.87
SSSCA1-203ENST00000526877 ARL2-SNX15V9GYD0 113 aa9.62□□□□□ -0.87
SSSCA1-203ENST00000526877 COL7A1Q02388 2944 aa9.62□□□□□ -0.87
SSSCA1-203ENST00000526877 LOC102723971A0A1B0GUV8 181 aa9.61□□□□□ -0.87
SSSCA1-203ENST00000526877 TMEM213A2RRL7 107 aa9.61□□□□□ -0.87
SSSCA1-203ENST00000526877 ZNF785A8K8V0 405 aa9.61□□□□□ -0.87
SSSCA1-203ENST00000526877 MRPS12O15235 138 aaKnown RBP9.61□□□□□ -0.87
SSSCA1-203ENST00000526877 PAGE4O60829 102 aa9.61□□□□□ -0.87
SSSCA1-203ENST00000526877 UBE2G2P60604 165 aa9.61□□□□□ -0.87
SSSCA1-203ENST00000526877 ZNF506Q5JVG8 444 aa9.61□□□□□ -0.87
SSSCA1-203ENST00000526877 CST9LP1Q5W188 147 aa9.61□□□□□ -0.87
SSSCA1-203ENST00000526877 SIGLEC15Q6ZMC9 328 aa9.61□□□□□ -0.87
SSSCA1-203ENST00000526877 EIF4E3Q8N5X7 224 aaKnown RBP9.61□□□□□ -0.87
SSSCA1-203ENST00000526877 OR9G4Q8NGQ1 327 aa9.61□□□□□ -0.87
SSSCA1-203ENST00000526877 BLNKQ8WV28 456 aa9.61□□□□□ -0.87
SSSCA1-203ENST00000526877 DLX4Q92988 240 aaPredicted RBP9.61□□□□□ -0.87
SSSCA1-203ENST00000526877 TXNDC17Q9BRA2 123 aa9.61□□□□□ -0.87
SSSCA1-203ENST00000526877 RHPN1-AS1Q9BWJ2 59 aa9.61□□□□□ -0.87
SSSCA1-203ENST00000526877 SMDT1Q9H4I9 107 aa9.61□□□□□ -0.87
SSSCA1-203ENST00000526877 TREM1Q9NP99 234 aa9.61□□□□□ -0.87
SSSCA1-203ENST00000526877 A0A1W2PRE2 83 aa9.6□□□□□ -0.87
SSSCA1-203ENST00000526877 HELTA6NFD8 242 aa9.6□□□□□ -0.87
SSSCA1-203ENST00000526877 C2orf70A6NJV1 201 aa9.6□□□□□ -0.87
SSSCA1-203ENST00000526877 CHEK1O14757 476 aa9.6□□□□□ -0.87
SSSCA1-203ENST00000526877 IGLC2P0DOY2 106 aa9.6□□□□□ -0.87
SSSCA1-203ENST00000526877 CBLN1P23435 193 aa9.6□□□□□ -0.87
SSSCA1-203ENST00000526877 MEOX2P50222 304 aa9.6□□□□□ -0.87
SSSCA1-203ENST00000526877 RXFP4Q8TDU9 374 aa9.6□□□□□ -0.87
SSSCA1-203ENST00000526877 GLMPQ8WWB7 406 aa9.6□□□□□ -0.87
SSSCA1-203ENST00000526877 CITED4Q96RK1 184 aa9.6□□□□□ -0.87
SSSCA1-203ENST00000526877 RARRES2Q99969 163 aa9.6□□□□□ -0.87
SSSCA1-203ENST00000526877 GPR61Q9BZJ8 451 aa9.6□□□□□ -0.87
SSSCA1-203ENST00000526877 NKX6-2Q9C056 277 aaPredicted RBP9.6□□□□□ -0.87
SSSCA1-203ENST00000526877 ZNF586Q9NXT0 402 aa9.6□□□□□ -0.87
SSSCA1-203ENST00000526877 A0A087X0K7 114 aa9.59□□□□□ -0.87
SSSCA1-203ENST00000526877 FAM74A7A6NL05 159 aa9.59□□□□□ -0.87
SSSCA1-203ENST00000526877 C11orf94C9JXX5 98 aa9.59□□□□□ -0.87
SSSCA1-203ENST00000526877 H3BQ15 152 aa9.59□□□□□ -0.87
SSSCA1-203ENST00000526877 OVOL1O14753 267 aa9.59□□□□□ -0.87
SSSCA1-203ENST00000526877 CD5P06127 495 aa9.59□□□□□ -0.87
SSSCA1-203ENST00000526877 MEF2BQ02080 365 aaPredicted RBP9.59□□□□□ -0.87
SSSCA1-203ENST00000526877 PDE6HQ13956 83 aa9.59□□□□□ -0.87
SSSCA1-203ENST00000526877 ICAM4Q14773 271 aa9.59□□□□□ -0.87
SSSCA1-203ENST00000526877 YTHDF2Q9Y5A9 579 aaKnown RBP9.59□□□□□ -0.87
SSSCA1-203ENST00000526877 SMAD5-AS1Q9Y6J3 95 aa9.59□□□□□ -0.87
SSSCA1-203ENST00000526877 SORL1Q92673 2214 aa9.58□□□□□ -0.88
SSSCA1-203ENST00000526877 TRBV19A0A075B6N1 114 aa9.58□□□□□ -0.88
SSSCA1-203ENST00000526877 SNRPCP09234 159 aaKnown RBP9.58□□□□□ -0.88
SSSCA1-203ENST00000526877 FOLR2P14207 255 aa9.58□□□□□ -0.88
SSSCA1-203ENST00000526877 RANP62826 216 aaKnown RBP9.58□□□□□ -0.88
SSSCA1-203ENST00000526877 RPL11P62913 178 aaKnown RBP9.58□□□□□ -0.88
SSSCA1-203ENST00000526877 PSG9Q00887 426 aa9.58□□□□□ -0.88
SSSCA1-203ENST00000526877 TCF24Q7RTU0 167 aa9.58□□□□□ -0.88
SSSCA1-203ENST00000526877 LYPD1Q8N2G4 141 aa9.58□□□□□ -0.88
SSSCA1-203ENST00000526877 F6UZH7 168 aa9.57□□□□□ -0.88
SSSCA1-203ENST00000526877 H3BTX0 84 aa9.57□□□□□ -0.88
SSSCA1-203ENST00000526877 PDE6DO43924 150 aa9.57□□□□□ -0.88
SSSCA1-203ENST00000526877 ZNF253O75346 499 aa9.57□□□□□ -0.88
SSSCA1-203ENST00000526877 NDUFS6O75380 124 aaKnown RBP9.57□□□□□ -0.88
SSSCA1-203ENST00000526877 CSN3P07498 182 aa9.57□□□□□ -0.88
SSSCA1-203ENST00000526877 EDN2P20800 178 aa9.57□□□□□ -0.88
SSSCA1-203ENST00000526877 ATP5G3P48201 142 aa9.57□□□□□ -0.88
SSSCA1-203ENST00000526877 SUMO1P63165 101 aaKnown RBP9.57□□□□□ -0.88
SSSCA1-203ENST00000526877 SRSF3P84103 164 aaKnown RBP9.57□□□□□ -0.88
SSSCA1-203ENST00000526877 DEFB121Q5J5C9 76 aa9.57□□□□□ -0.88
SSSCA1-203ENST00000526877 DYNLRB2Q8TF09 96 aa9.57□□□□□ -0.88
SSSCA1-203ENST00000526877 C17orf77Q96MU5 243 aa9.57□□□□□ -0.88
SSSCA1-203ENST00000526877 SLC35B3Q9H1N7 401 aa9.57□□□□□ -0.88
SSSCA1-203ENST00000526877 AAMDCQ9H7C9 122 aa9.57□□□□□ -0.88
SSSCA1-203ENST00000526877 OTORQ9NRC9 128 aa9.57□□□□□ -0.88
SSSCA1-203ENST00000526877 PGPA6NDG6 321 aa9.56□□□□□ -0.88
SSSCA1-203ENST00000526877 SRP19P09132 144 aaKnown RBP9.56□□□□□ -0.88
SSSCA1-203ENST00000526877 CD81P60033 236 aa9.56□□□□□ -0.88
SSSCA1-203ENST00000526877 SAMD13Q5VXD3 122 aa9.56□□□□□ -0.88
SSSCA1-203ENST00000526877 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.56□□□□□ -0.88
SSSCA1-203ENST00000526877 SLC50A1Q9BRV3 221 aa9.56□□□□□ -0.88
SSSCA1-203ENST00000526877 Q9H3A6 140 aa9.56□□□□□ -0.88
SSSCA1-203ENST00000526877 GGTLC3B5MD39 225 aa9.55□□□□□ -0.88
SSSCA1-203ENST00000526877 TMEM250H0YL14 139 aa9.55□□□□□ -0.88
SSSCA1-203ENST00000526877 NDUFB4O95168 129 aa9.55□□□□□ -0.88
SSSCA1-203ENST00000526877 SLC25A5P05141 298 aaKnown RBP9.55□□□□□ -0.88
SSSCA1-203ENST00000526877 C9orf66Q5T8R8 295 aa9.55□□□□□ -0.88
SSSCA1-203ENST00000526877 CMTM2Q8TAZ6 248 aa9.55□□□□□ -0.88
SSSCA1-203ENST00000526877 TCEAL7Q9BRU2 100 aa9.55□□□□□ -0.88
SSSCA1-203ENST00000526877 NRN1Q9NPD7 142 aa9.55□□□□□ -0.88
SSSCA1-203ENST00000526877 CLEC5AQ9NY25 188 aa9.55□□□□□ -0.88
SSSCA1-203ENST00000526877 SIGLEC8Q9NYZ4 499 aa9.55□□□□□ -0.88
SSSCA1-203ENST00000526877 MLXQ9UH92 298 aa9.55□□□□□ -0.88
SSSCA1-203ENST00000526877 IGKV3-7A0A075B6H7 116 aa9.54□□□□□ -0.88
SSSCA1-203ENST00000526877 TMEM218A2RU14 115 aa9.54□□□□□ -0.88
SSSCA1-203ENST00000526877 DNASE2O00115 360 aaPredicted RBP9.54□□□□□ -0.88
SSSCA1-203ENST00000526877 SFTA3P0C7M3 94 aa9.54□□□□□ -0.88
SSSCA1-203ENST00000526877 CEBPGP53567 150 aa9.54□□□□□ -0.88
SSSCA1-203ENST00000526877 PAFAH1B2P68402 229 aa9.54□□□□□ -0.88
SSSCA1-203ENST00000526877 FAM90A2PQ658T7 463 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms