RNA–Protein interactions for RNA: ENST00000525854.5

HIF3A-209, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 5

Gene HIF3A, Length 767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-209ENST00000525854 COX7A2P2O60397 106 aa8.31□□□□□ -1.08
HIF3A-209ENST00000525854 H2AFB2P0C5Z0 115 aa8.31□□□□□ -1.08
HIF3A-209ENST00000525854 CXCL2P19875 107 aa8.31□□□□□ -1.08
HIF3A-209ENST00000525854 CXCL3P19876 107 aa8.31□□□□□ -1.08
HIF3A-209ENST00000525854 CAV2P51636 162 aa8.31□□□□□ -1.08
HIF3A-209ENST00000525854 ARL16Q0P5N6 197 aa8.31□□□□□ -1.08
HIF3A-209ENST00000525854 OXA1LQ15070 435 aa8.31□□□□□ -1.08
HIF3A-209ENST00000525854 MZT2BQ6NZ67 158 aa8.31□□□□□ -1.08
HIF3A-209ENST00000525854 PATE2Q6UY27 113 aa8.31□□□□□ -1.08
HIF3A-209ENST00000525854 LINC00305Q7Z4B0 112 aa8.31□□□□□ -1.08
HIF3A-209ENST00000525854 C2orf50Q96LR7 162 aa8.31□□□□□ -1.08
HIF3A-209ENST00000525854 SEC22CQ9BRL7 303 aa8.31□□□□□ -1.08
HIF3A-209ENST00000525854 PPP1R14DQ9NXH3 145 aa8.31□□□□□ -1.08
HIF3A-209ENST00000525854 YTHDF2Q9Y5A9 579 aaKnown RBP8.31□□□□□ -1.08
HIF3A-209ENST00000525854 FAM240BA0A1B0GVZ2 78 aa8.3□□□□□ -1.08
HIF3A-209ENST00000525854 BOLA2-SMG1P6H3BVE0 249 aa8.3□□□□□ -1.08
HIF3A-209ENST00000525854 M0R2Z0 102 aa8.3□□□□□ -1.08
HIF3A-209ENST00000525854 RHOBP62745 196 aa8.3□□□□□ -1.08
HIF3A-209ENST00000525854 HIST1H1AQ02539 215 aaPredicted RBP8.3□□□□□ -1.08
HIF3A-209ENST00000525854 PSG3Q16557 428 aa8.3□□□□□ -1.08
HIF3A-209ENST00000525854 SPINK13Q1W4C9 94 aa8.3□□□□□ -1.08
HIF3A-209ENST00000525854 LCN15Q6UWW0 184 aa8.3□□□□□ -1.08
HIF3A-209ENST00000525854 Q6ZRG5 221 aa8.3□□□□□ -1.08
HIF3A-209ENST00000525854 BPIFA4PQ86YQ2 179 aa8.3□□□□□ -1.08
HIF3A-209ENST00000525854 OR8A1Q8NGG7 326 aa8.3□□□□□ -1.08
HIF3A-209ENST00000525854 MGST2Q99735 147 aa8.3□□□□□ -1.08
HIF3A-209ENST00000525854 SLC50A1Q9BRV3 221 aa8.3□□□□□ -1.08
HIF3A-209ENST00000525854 MRPS12O15235 138 aaKnown RBP8.29□□□□□ -1.08
HIF3A-209ENST00000525854 CST7O76096 145 aa8.29□□□□□ -1.08
HIF3A-209ENST00000525854 CAMLGP49069 296 aa8.29□□□□□ -1.08
HIF3A-209ENST00000525854 S100A10P60903 97 aa8.29□□□□□ -1.08
HIF3A-209ENST00000525854 DAD1P61803 113 aa8.29□□□□□ -1.08
HIF3A-209ENST00000525854 C10orf113Q5VZT2 155 aa8.29□□□□□ -1.08
HIF3A-209ENST00000525854 STX12Q86Y82 276 aa8.29□□□□□ -1.08
HIF3A-209ENST00000525854 TMEM256Q8N2U0 113 aa8.29□□□□□ -1.08
HIF3A-209ENST00000525854 POM121L12Q8N7R1 296 aa8.29□□□□□ -1.08
HIF3A-209ENST00000525854 RPUSD4Q96CM3 377 aaKnown RBP8.29□□□□□ -1.08
HIF3A-209ENST00000525854 DNAJC4Q9NNZ3 241 aa8.29□□□□□ -1.08
HIF3A-209ENST00000525854 UQCC1Q9NVA1 299 aa8.29□□□□□ -1.08
HIF3A-209ENST00000525854 CRXO43186 299 aaPredicted RBP8.28□□□□□ -1.08
HIF3A-209ENST00000525854 HTN3P15516 51 aa8.28□□□□□ -1.08
HIF3A-209ENST00000525854 TSPOP30536 169 aa8.28□□□□□ -1.08
HIF3A-209ENST00000525854 S100A11P31949 105 aa8.28□□□□□ -1.08
HIF3A-209ENST00000525854 SULT1A1P50225 295 aa8.28□□□□□ -1.08
HIF3A-209ENST00000525854 HBG1P69891 147 aa8.28□□□□□ -1.08
HIF3A-209ENST00000525854 HBG2P69892 147 aa8.28□□□□□ -1.08
HIF3A-209ENST00000525854 NRARPQ7Z6K4 114 aa8.28□□□□□ -1.08
HIF3A-209ENST00000525854 BAP18Q8IXM2 172 aa8.28□□□□□ -1.08
HIF3A-209ENST00000525854 OR1L4Q8NGR5 311 aa8.28□□□□□ -1.08
HIF3A-209ENST00000525854 TMEM37Q8WXS4 190 aa8.28□□□□□ -1.08
HIF3A-209ENST00000525854 ZNF331Q9NQX6 463 aaPredicted RBP8.28□□□□□ -1.08
HIF3A-209ENST00000525854 LYRM2Q9NU23 88 aaPredicted RBP8.28□□□□□ -1.08
HIF3A-209ENST00000525854 WDR83OSQ9Y284 106 aa8.28□□□□□ -1.08
HIF3A-209ENST00000525854 PXMP4Q9Y6I8 212 aa8.28□□□□□ -1.08
HIF3A-209ENST00000525854 FAM24AA6NFZ4 105 aa8.27□□□□□ -1.09
HIF3A-209ENST00000525854 LYRM9A8MSI8 78 aa8.27□□□□□ -1.09
HIF3A-209ENST00000525854 ZNF705GA8MUZ8 300 aaPredicted RBP8.27□□□□□ -1.09
HIF3A-209ENST00000525854 ASAH1Q13510 395 aa8.27□□□□□ -1.09
HIF3A-209ENST00000525854 OPCMLQ14982 345 aa8.27□□□□□ -1.09
HIF3A-209ENST00000525854 GUK1Q16774 197 aa8.27□□□□□ -1.09
HIF3A-209ENST00000525854 VWC2Q2TAL6 325 aa8.27□□□□□ -1.09
HIF3A-209ENST00000525854 LINC01587Q99440 93 aa8.27□□□□□ -1.09
HIF3A-209ENST00000525854 PFDN5Q99471 154 aa8.27□□□□□ -1.09
HIF3A-209ENST00000525854 C11orf1Q9H5F2 150 aa8.27□□□□□ -1.09
HIF3A-209ENST00000525854 GPN1Q9HCN4 374 aaPredicted RBP8.27□□□□□ -1.09
HIF3A-209ENST00000525854 PLA2G2EQ9NZK7 142 aa8.27□□□□□ -1.09
HIF3A-209ENST00000525854 VPS13DQ5THJ4 4388 aa8.26□□□□□ -1.09
HIF3A-209ENST00000525854 TRAV12-2A0A075B6T6 113 aa8.26□□□□□ -1.09
HIF3A-209ENST00000525854 CDKN1BP46527 198 aa8.26□□□□□ -1.09
HIF3A-209ENST00000525854 RPL29P47914 159 aaKnown RBP8.26□□□□□ -1.09
HIF3A-209ENST00000525854 TAS2R60P59551 318 aa8.26□□□□□ -1.09
HIF3A-209ENST00000525854 BAXQ07812 192 aa8.26□□□□□ -1.09
HIF3A-209ENST00000525854 IL15RAQ13261 267 aa8.26□□□□□ -1.09
HIF3A-209ENST00000525854 RAB32Q13637 225 aa8.26□□□□□ -1.09
HIF3A-209ENST00000525854 ATP6V1FQ16864 119 aa8.26□□□□□ -1.09
HIF3A-209ENST00000525854 MIC13Q5XKP0 118 aa8.26□□□□□ -1.09
HIF3A-209ENST00000525854 UBE2DNLQ8IWF7 75 aa8.26□□□□□ -1.09
HIF3A-209ENST00000525854 TMEM252Q8N6L7 170 aa8.26□□□□□ -1.09
HIF3A-209ENST00000525854 OR10J6PQ8NGY7 276 aa8.26□□□□□ -1.09
HIF3A-209ENST00000525854 ENKURQ8TC29 256 aa8.26□□□□□ -1.09
HIF3A-209ENST00000525854 UBE2L5PA0A1B0GUS4 154 aa8.25□□□□□ -1.09
HIF3A-209ENST00000525854 IGSF23A1L1A6 192 aa8.25□□□□□ -1.09
HIF3A-209ENST00000525854 MPDU1O75352 247 aa8.25□□□□□ -1.09
HIF3A-209ENST00000525854 UPK1BO75841 260 aa8.25□□□□□ -1.09
HIF3A-209ENST00000525854 IGLC2P0DOY2 106 aa8.25□□□□□ -1.09
HIF3A-209ENST00000525854 MORN5Q5VZ52 161 aa8.25□□□□□ -1.09
HIF3A-209ENST00000525854 LINC00336Q6ZUF6 198 aa8.25□□□□□ -1.09
HIF3A-209ENST00000525854 CHAC2Q8WUX2 184 aa8.25□□□□□ -1.09
HIF3A-209ENST00000525854 C20orf144Q9BQM9 153 aa8.25□□□□□ -1.09
HIF3A-209ENST00000525854 SLC39A9Q9NUM3 307 aa8.25□□□□□ -1.09
HIF3A-209ENST00000525854 H3BQ15 152 aa8.24□□□□□ -1.09
HIF3A-209ENST00000525854 SLC17A3O00476 420 aa8.24□□□□□ -1.09
HIF3A-209ENST00000525854 RLN2P04090 185 aa8.24□□□□□ -1.09
HIF3A-209ENST00000525854 SNRPCP09234 159 aaKnown RBP8.24□□□□□ -1.09
HIF3A-209ENST00000525854 DEFB130BP0DP73 79 aa8.24□□□□□ -1.09
HIF3A-209ENST00000525854 DEFB130AP0DP74 79 aa8.24□□□□□ -1.09
HIF3A-209ENST00000525854 HTN1P15515 57 aa8.24□□□□□ -1.09
HIF3A-209ENST00000525854 RGS21Q2M5E4 152 aa8.24□□□□□ -1.09
HIF3A-209ENST00000525854 RNF212Q495C1 297 aa8.24□□□□□ -1.09
HIF3A-209ENST00000525854 TMEM88Q6PEY1 159 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms