RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 RRN3P1Q2M238 152 aa13.29□□□□□ -0.28
CAPN1-203ENST00000525013 C10orf113Q5VZT2 155 aa13.29□□□□□ -0.28
CAPN1-203ENST00000525013 NRARPQ7Z6K4 114 aa13.29□□□□□ -0.28
CAPN1-203ENST00000525013 RNF126Q9BV68 326 aa13.29□□□□□ -0.28
CAPN1-203ENST00000525013 UQCC1Q9NVA1 299 aa13.29□□□□□ -0.28
CAPN1-203ENST00000525013 PRB4P10163 310 aaPredicted RBP13.28□□□□□ -0.28
CAPN1-203ENST00000525013 SULT1A1P50225 295 aa13.28□□□□□ -0.28
CAPN1-203ENST00000525013 RHOBP62745 196 aa13.28□□□□□ -0.28
CAPN1-203ENST00000525013 PRR20EP86478 221 aa13.28□□□□□ -0.28
CAPN1-203ENST00000525013 PRR20CP86479 221 aa13.28□□□□□ -0.28
CAPN1-203ENST00000525013 PRR20DP86480 221 aa13.28□□□□□ -0.28
CAPN1-203ENST00000525013 PRR20BP86481 221 aa13.28□□□□□ -0.28
CAPN1-203ENST00000525013 PRR20AP86496 221 aa13.28□□□□□ -0.28
CAPN1-203ENST00000525013 PSG3Q16557 428 aa13.28□□□□□ -0.28
CAPN1-203ENST00000525013 MIC13Q5XKP0 118 aa13.28□□□□□ -0.28
CAPN1-203ENST00000525013 Q6ZRG5 221 aa13.28□□□□□ -0.28
CAPN1-203ENST00000525013 STX12Q86Y82 276 aa13.28□□□□□ -0.28
CAPN1-203ENST00000525013 BPIFA4PQ86YQ2 179 aa13.28□□□□□ -0.28
CAPN1-203ENST00000525013 TMEM37Q8WXS4 190 aa13.28□□□□□ -0.28
CAPN1-203ENST00000525013 GPN1Q9HCN4 374 aaPredicted RBP13.28□□□□□ -0.28
CAPN1-203ENST00000525013 LYRM2Q9NU23 88 aaPredicted RBP13.28□□□□□ -0.28
CAPN1-203ENST00000525013 PPP1R14DQ9NXH3 145 aa13.28□□□□□ -0.28
CAPN1-203ENST00000525013 VPS13DQ5THJ4 4388 aa13.27□□□□□ -0.28
CAPN1-203ENST00000525013 UBE2L5PA0A1B0GUS4 154 aa13.27□□□□□ -0.29
CAPN1-203ENST00000525013 IGSF23A1L1A6 192 aa13.27□□□□□ -0.29
CAPN1-203ENST00000525013 A6NHS1 94 aa13.27□□□□□ -0.29
CAPN1-203ENST00000525013 MRPS12O15235 138 aaKnown RBP13.27□□□□□ -0.29
CAPN1-203ENST00000525013 UPK1BO75841 260 aa13.27□□□□□ -0.29
CAPN1-203ENST00000525013 INSP01308 110 aa13.27□□□□□ -0.29
CAPN1-203ENST00000525013 S100A11P31949 105 aa13.27□□□□□ -0.29
CAPN1-203ENST00000525013 IL15RAQ13261 267 aa13.27□□□□□ -0.29
CAPN1-203ENST00000525013 FAM222AQ5U5X8 452 aa13.27□□□□□ -0.29
CAPN1-203ENST00000525013 TMEM252Q8N6L7 170 aa13.27□□□□□ -0.29
CAPN1-203ENST00000525013 OR8A1Q8NGG7 326 aa13.27□□□□□ -0.29
CAPN1-203ENST00000525013 DNAJC4Q9NNZ3 241 aa13.27□□□□□ -0.29
CAPN1-203ENST00000525013 DKK2Q9UBU2 259 aa13.27□□□□□ -0.29
CAPN1-203ENST00000525013 TEX48A0A1B0GUV7 120 aa13.26□□□□□ -0.29
CAPN1-203ENST00000525013 BOLA2-SMG1P6H3BVE0 249 aa13.26□□□□□ -0.29
CAPN1-203ENST00000525013 HBG1P69891 147 aa13.26□□□□□ -0.29
CAPN1-203ENST00000525013 HBG2P69892 147 aa13.26□□□□□ -0.29
CAPN1-203ENST00000525013 BAXQ07812 192 aa13.26□□□□□ -0.29
CAPN1-203ENST00000525013 MORN5Q5VZ52 161 aa13.26□□□□□ -0.29
CAPN1-203ENST00000525013 LCN15Q6UWW0 184 aa13.26□□□□□ -0.29
CAPN1-203ENST00000525013 BAP18Q8IXM2 172 aa13.26□□□□□ -0.29
CAPN1-203ENST00000525013 RPUSD4Q96CM3 377 aaKnown RBP13.26□□□□□ -0.29
CAPN1-203ENST00000525013 NIPSNAP3BQ9BS92 247 aa13.26□□□□□ -0.29
CAPN1-203ENST00000525013 PLA2G2EQ9NZK7 142 aa13.26□□□□□ -0.29
CAPN1-203ENST00000525013 WDR83OSQ9Y284 106 aa13.26□□□□□ -0.29
CAPN1-203ENST00000525013 YTHDF2Q9Y5A9 579 aaKnown RBP13.26□□□□□ -0.29
CAPN1-203ENST00000525013 BIRC6Q9NR09 4857 aa13.26□□□□□ -0.29
CAPN1-203ENST00000525013 TRAV12-2A0A075B6T6 113 aa13.25□□□□□ -0.29
CAPN1-203ENST00000525013 H3BTX0 84 aa13.25□□□□□ -0.29
CAPN1-203ENST00000525013 CXCL2P19875 107 aa13.25□□□□□ -0.29
CAPN1-203ENST00000525013 OPCMLQ14982 345 aa13.25□□□□□ -0.29
CAPN1-203ENST00000525013 OR1L4Q8NGR5 311 aa13.25□□□□□ -0.29
CAPN1-203ENST00000525013 SLC50A1Q9BRV3 221 aa13.25□□□□□ -0.29
CAPN1-203ENST00000525013 NDUFAF3Q9BU61 184 aa13.25□□□□□ -0.29
CAPN1-203ENST00000525013 PTTG2Q9NZH5 202 aa13.25□□□□□ -0.29
CAPN1-203ENST00000525013 ZNF705GA8MUZ8 300 aaPredicted RBP13.24□□□□□ -0.29
CAPN1-203ENST00000525013 CRXO43186 299 aaPredicted RBP13.24□□□□□ -0.29
CAPN1-203ENST00000525013 SIX6O95475 246 aa13.24□□□□□ -0.29
CAPN1-203ENST00000525013 HTN3P15516 51 aa13.24□□□□□ -0.29
CAPN1-203ENST00000525013 FGF7P21781 194 aa13.24□□□□□ -0.29
CAPN1-203ENST00000525013 VWC2Q2TAL6 325 aa13.24□□□□□ -0.29
CAPN1-203ENST00000525013 PFDN5Q99471 154 aa13.24□□□□□ -0.29
CAPN1-203ENST00000525013 ZNF331Q9NQX6 463 aaPredicted RBP13.24□□□□□ -0.29
CAPN1-203ENST00000525013 TRAV5A0A0B4J249 113 aa13.23□□□□□ -0.29
CAPN1-203ENST00000525013 PRM2P04554 102 aa13.23□□□□□ -0.29
CAPN1-203ENST00000525013 B2MP61769 119 aa13.23□□□□□ -0.29
CAPN1-203ENST00000525013 IFITM3Q01628 133 aa13.23□□□□□ -0.29
CAPN1-203ENST00000525013 ATP6V1FQ16864 119 aa13.23□□□□□ -0.29
CAPN1-203ENST00000525013 SLC39A9Q9NUM3 307 aa13.23□□□□□ -0.29
CAPN1-203ENST00000525013 INMT-MINDY4F8WBC2 141 aa13.22□□□□□ -0.29
CAPN1-203ENST00000525013 SLC17A3O00476 420 aa13.22□□□□□ -0.29
CAPN1-203ENST00000525013 RLN2P04090 185 aa13.22□□□□□ -0.29
CAPN1-203ENST00000525013 RPL29P47914 159 aaKnown RBP13.22□□□□□ -0.29
CAPN1-203ENST00000525013 DAD1P61803 113 aa13.22□□□□□ -0.29
CAPN1-203ENST00000525013 LINC01587Q99440 93 aa13.22□□□□□ -0.29
CAPN1-203ENST00000525013 PXMP4Q9Y6I8 212 aa13.22□□□□□ -0.29
CAPN1-203ENST00000525013 H3BQ15 152 aa13.21□□□□□ -0.29
CAPN1-203ENST00000525013 PRAF2O60831 178 aa13.21□□□□□ -0.29
CAPN1-203ENST00000525013 IGLC2P0DOY2 106 aa13.21□□□□□ -0.29
CAPN1-203ENST00000525013 LRRC37A5PQ49AS3 106 aa13.21□□□□□ -0.29
CAPN1-203ENST00000525013 HTN1P15515 57 aa13.2□□□□□ -0.3
CAPN1-203ENST00000525013 NHLH2Q02577 135 aa13.2□□□□□ -0.3
CAPN1-203ENST00000525013 OR10J6PQ8NGY7 276 aa13.2□□□□□ -0.3
CAPN1-203ENST00000525013 NMES1Q9C002 83 aa13.2□□□□□ -0.3
CAPN1-203ENST00000525013 SLC25A31Q9H0C2 315 aa13.2□□□□□ -0.3
CAPN1-203ENST00000525013 FRAS1Q86XX4 4008 aa13.2□□□□□ -0.3
CAPN1-203ENST00000525013 PRAC2D3DTV9 90 aa13.19□□□□□ -0.3
CAPN1-203ENST00000525013 E5RGE8 158 aa13.19□□□□□ -0.3
CAPN1-203ENST00000525013 P0DMU3 169 aa13.19□□□□□ -0.3
CAPN1-203ENST00000525013 FAM231AP0DMU4 169 aa13.19□□□□□ -0.3
CAPN1-203ENST00000525013 FAM231CP0DMU5 169 aa13.19□□□□□ -0.3
CAPN1-203ENST00000525013 CDKN1BP46527 198 aa13.19□□□□□ -0.3
CAPN1-203ENST00000525013 OXA1LQ15070 435 aa13.19□□□□□ -0.3
CAPN1-203ENST00000525013 GUK1Q16774 197 aa13.19□□□□□ -0.3
CAPN1-203ENST00000525013 TMEM256Q8N2U0 113 aa13.19□□□□□ -0.3
CAPN1-203ENST00000525013 OR5C1Q8NGR4 320 aa13.19□□□□□ -0.3
CAPN1-203ENST00000525013 OR5AC2Q9NZP5 309 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 290.5 ms