RNA–Protein interactions for RNA: ENST00000523990.1

FBXO28-205, Transcript of F-box protein 28, humanhuman

TSL 2

Gene FBXO28, Length 1,415 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28-205ENST00000523990 H0YIZ8 118 aa13.8□□□□□ -0.2
FBXO28-205ENST00000523990 OPCMLQ14982 345 aa13.8□□□□□ -0.2
FBXO28-205ENST00000523990 ATP6V1FQ16864 119 aa13.8□□□□□ -0.2
FBXO28-205ENST00000523990 AMTNQ6UX39 209 aa13.8□□□□□ -0.2
FBXO28-205ENST00000523990 Q6ZRG5 221 aa13.8□□□□□ -0.2
FBXO28-205ENST00000523990 NEU1Q99519 415 aa13.8□□□□□ -0.2
FBXO28-205ENST00000523990 E5RGE8 158 aa13.79□□□□□ -0.2
FBXO28-205ENST00000523990 CXCL2P19875 107 aa13.79□□□□□ -0.2
FBXO28-205ENST00000523990 CXCL3P19876 107 aa13.79□□□□□ -0.2
FBXO28-205ENST00000523990 HLA-DMBP28068 263 aa13.79□□□□□ -0.2
FBXO28-205ENST00000523990 RPL29P47914 159 aaKnown RBP13.79□□□□□ -0.2
FBXO28-205ENST00000523990 CNN1P51911 297 aaKnown RBP13.79□□□□□ -0.2
FBXO28-205ENST00000523990 CYCSP99999 105 aaKnown RBP13.79□□□□□ -0.2
FBXO28-205ENST00000523990 BPIFA4PQ86YQ2 179 aa13.79□□□□□ -0.2
FBXO28-205ENST00000523990 ZNF738Q8NE65 137 aa13.79□□□□□ -0.2
FBXO28-205ENST00000523990 CHAC2Q8WUX2 184 aa13.79□□□□□ -0.2
FBXO28-205ENST00000523990 SSNA1O43805 119 aa13.78□□□□□ -0.2
FBXO28-205ENST00000523990 RLN2P04090 185 aa13.78□□□□□ -0.2
FBXO28-205ENST00000523990 FGF7P21781 194 aa13.78□□□□□ -0.2
FBXO28-205ENST00000523990 B2MP61769 119 aa13.78□□□□□ -0.2
FBXO28-205ENST00000523990 NHLH2Q02577 135 aa13.78□□□□□ -0.2
FBXO28-205ENST00000523990 LCN15Q6UWW0 184 aa13.78□□□□□ -0.2
FBXO28-205ENST00000523990 OR1L4Q8NGR5 311 aa13.78□□□□□ -0.2
FBXO28-205ENST00000523990 PPP1R1CQ8WVI7 109 aa13.78□□□□□ -0.2
FBXO28-205ENST00000523990 PFDN5Q99471 154 aa13.78□□□□□ -0.2
FBXO28-205ENST00000523990 DNAJC4Q9NNZ3 241 aa13.78□□□□□ -0.2
FBXO28-205ENST00000523990 CELA1Q9UNI1 258 aa13.78□□□□□ -0.2
FBXO28-205ENST00000523990 DUSP14O95147 198 aaKnown RBP13.77□□□□□ -0.21
FBXO28-205ENST00000523990 OR5C1Q8NGR4 320 aa13.77□□□□□ -0.21
FBXO28-205ENST00000523990 SLC25A31Q9H0C2 315 aa13.77□□□□□ -0.21
FBXO28-205ENST00000523990 SLC39A9Q9NUM3 307 aa13.77□□□□□ -0.21
FBXO28-205ENST00000523990 PXMP4Q9Y6I8 212 aa13.77□□□□□ -0.21
FBXO28-205ENST00000523990 DNAH6Q9C0G6 4158 aa13.77□□□□□ -0.21
FBXO28-205ENST00000523990 FRAS1Q86XX4 4008 aa13.77□□□□□ -0.21
FBXO28-205ENST00000523990 IGHV3OR16-12A0A075B7B8 117 aa13.76□□□□□ -0.21
FBXO28-205ENST00000523990 MPDU1O75352 247 aa13.76□□□□□ -0.21
FBXO28-205ENST00000523990 IGLC2P0DOY2 106 aa13.76□□□□□ -0.21
FBXO28-205ENST00000523990 PSG3Q16557 428 aa13.76□□□□□ -0.21
FBXO28-205ENST00000523990 Q6ZTC4 211 aa13.76□□□□□ -0.21
FBXO28-205ENST00000523990 OR11H7Q8NGC8 314 aa13.76□□□□□ -0.21
FBXO28-205ENST00000523990 LRRC20Q8TCA0 184 aa13.76□□□□□ -0.21
FBXO28-205ENST00000523990 SLC50A1Q9BRV3 221 aa13.76□□□□□ -0.21
FBXO28-205ENST00000523990 NPCDR1Q9BY65 106 aa13.76□□□□□ -0.21
FBXO28-205ENST00000523990 ZNF331Q9NQX6 463 aaPredicted RBP13.76□□□□□ -0.21
FBXO28-205ENST00000523990 EPPK1P58107 5090 aaKnown RBP13.75□□□□□ -0.21
FBXO28-205ENST00000523990 SMIM9A6NGZ8 99 aa13.75□□□□□ -0.21
FBXO28-205ENST00000523990 SLC17A3O00476 420 aa13.75□□□□□ -0.21
FBXO28-205ENST00000523990 SNRPCP09234 159 aaKnown RBP13.75□□□□□ -0.21
FBXO28-205ENST00000523990 C1orf158Q8N1D5 194 aa13.75□□□□□ -0.21
FBXO28-205ENST00000523990 GOLT1BQ9Y3E0 138 aa13.75□□□□□ -0.21
FBXO28-205ENST00000523990 C11orf94C9JXX5 98 aa13.74□□□□□ -0.21
FBXO28-205ENST00000523990 SPINK13Q1W4C9 94 aa13.74□□□□□ -0.21
FBXO28-205ENST00000523990 OR8A1Q8NGG7 326 aa13.74□□□□□ -0.21
FBXO28-205ENST00000523990 C2CD4CQ8TF44 421 aa13.74□□□□□ -0.21
FBXO28-205ENST00000523990 IGF2BP2-AS1Q96M15 143 aa13.74□□□□□ -0.21
FBXO28-205ENST00000523990 TRAV5A0A0B4J249 113 aa13.73□□□□□ -0.21
FBXO28-205ENST00000523990 M0R2Z0 102 aa13.73□□□□□ -0.21
FBXO28-205ENST00000523990 CRXO43186 299 aaPredicted RBP13.73□□□□□ -0.21
FBXO28-205ENST00000523990 MPC2O95563 127 aa13.73□□□□□ -0.21
FBXO28-205ENST00000523990 LY6G6CO95867 125 aa13.73□□□□□ -0.21
FBXO28-205ENST00000523990 AMBPP02760 352 aa13.73□□□□□ -0.21
FBXO28-205ENST00000523990 HIST1H1AQ02539 215 aaPredicted RBP13.73□□□□□ -0.21
FBXO28-205ENST00000523990 CLINT1Q14677 625 aa13.73□□□□□ -0.21
FBXO28-205ENST00000523990 THAP6Q8TBB0 222 aa13.73□□□□□ -0.21
FBXO28-205ENST00000523990 RFNGQ9Y644 331 aa13.73□□□□□ -0.21
FBXO28-205ENST00000523990 H3BQ15 152 aa13.73□□□□□ -0.21
FBXO28-205ENST00000523990 H3BTX0 84 aa13.73□□□□□ -0.21
FBXO28-205ENST00000523990 PTTG1O95997 202 aa13.73□□□□□ -0.21
FBXO28-205ENST00000523990 PET100P0DJ07 73 aa13.73□□□□□ -0.21
FBXO28-205ENST00000523990 PRB4P10163 310 aaPredicted RBP13.73□□□□□ -0.21
FBXO28-205ENST00000523990 C12orf74Q32Q52 190 aa13.73□□□□□ -0.21
FBXO28-205ENST00000523990 RPUSD4Q96CM3 377 aaKnown RBP13.73□□□□□ -0.21
FBXO28-205ENST00000523990 SAT2Q96F10 170 aaPredicted RBP13.73□□□□□ -0.21
FBXO28-205ENST00000523990 RNF126Q9BV68 326 aa13.73□□□□□ -0.21
FBXO28-205ENST00000523990 TMEM189A5PLL7 270 aa13.72□□□□□ -0.21
FBXO28-205ENST00000523990 BOLA2-SMG1P6H3BVE0 249 aa13.72□□□□□ -0.21
FBXO28-205ENST00000523990 ZNF767PQ75MW2 155 aa13.72□□□□□ -0.21
FBXO28-205ENST00000523990 ALG5Q9Y673 324 aa13.72□□□□□ -0.21
FBXO28-205ENST00000523990 TRAV10A0A0B4J240 114 aa13.71□□□□□ -0.22
FBXO28-205ENST00000523990 INSP01308 110 aa13.71□□□□□ -0.22
FBXO28-205ENST00000523990 GUK1Q16774 197 aa13.71□□□□□ -0.22
FBXO28-205ENST00000523990 GCSAMLQ5JQS6 135 aa13.71□□□□□ -0.22
FBXO28-205ENST00000523990 BAP18Q8IXM2 172 aa13.71□□□□□ -0.22
FBXO28-205ENST00000523990 WDR61Q9GZS3 305 aaKnown RBP13.71□□□□□ -0.22
FBXO28-205ENST00000523990 HBE1P02100 147 aa13.7□□□□□ -0.22
FBXO28-205ENST00000523990 EMP1P54849 157 aa13.7□□□□□ -0.22
FBXO28-205ENST00000523990 TCTAP57738 103 aa13.7□□□□□ -0.22
FBXO28-205ENST00000523990 ZNF586Q9NXT0 402 aa13.7□□□□□ -0.22
FBXO28-205ENST00000523990 MBD2Q9UBB5 411 aa13.7□□□□□ -0.22
FBXO28-205ENST00000523990 HSPB11Q9Y547 144 aa13.7□□□□□ -0.22
FBXO28-205ENST00000523990 DNAH10Q8IVF4 4471 aa13.69□□□□□ -0.22
FBXO28-205ENST00000523990 TRAV12-2A0A075B6T6 113 aa13.69□□□□□ -0.22
FBXO28-205ENST00000523990 LOC102723971A0A1B0GUV8 181 aa13.69□□□□□ -0.22
FBXO28-205ENST00000523990 IGLL5B9A064 214 aa13.69□□□□□ -0.22
FBXO28-205ENST00000523990 RHOBP62745 196 aa13.69□□□□□ -0.22
FBXO28-205ENST00000523990 RRN3P1Q2M238 152 aa13.69□□□□□ -0.22
FBXO28-205ENST00000523990 ATP5SQ99766 215 aa13.69□□□□□ -0.22
FBXO28-205ENST00000523990 TMEM208Q9BTX3 173 aa13.69□□□□□ -0.22
FBXO28-205ENST00000523990 TMEM14CQ9P0S9 112 aa13.69□□□□□ -0.22
FBXO28-205ENST00000523990 DKK2Q9UBU2 259 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 227.9 ms