RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 MIC13Q5XKP0 118 aa9.26□□□□□ -0.93
VEGFA-225ENST00000523950 LINC00305Q7Z4B0 112 aa9.26□□□□□ -0.93
VEGFA-225ENST00000523950 UHRF2Q96PU4 802 aa9.26□□□□□ -0.93
VEGFA-225ENST00000523950 NPCDR1Q9BY65 106 aa9.26□□□□□ -0.93
VEGFA-225ENST00000523950 WDR61Q9GZS3 305 aaKnown RBP9.26□□□□□ -0.93
VEGFA-225ENST00000523950 CSTL1Q9H114 145 aa9.26□□□□□ -0.93
VEGFA-225ENST00000523950 DNAJC4Q9NNZ3 241 aa9.26□□□□□ -0.93
VEGFA-225ENST00000523950 SLC39A9Q9NUM3 307 aa9.26□□□□□ -0.93
VEGFA-225ENST00000523950 PXMP4Q9Y6I8 212 aa9.26□□□□□ -0.93
VEGFA-225ENST00000523950 HUWE1Q7Z6Z7 4374 aaKnown RBP9.25□□□□□ -0.93
VEGFA-225ENST00000523950 C17orf112F2Z3M2 114 aa9.25□□□□□ -0.93
VEGFA-225ENST00000523950 SPP1P10451 314 aa9.25□□□□□ -0.93
VEGFA-225ENST00000523950 ATF4P18848 351 aaPredicted RBP9.25□□□□□ -0.93
VEGFA-225ENST00000523950 SPATA31B1PQ5VZV4 182 aa9.25□□□□□ -0.93
VEGFA-225ENST00000523950 MORN3Q6PF18 240 aaPredicted RBP9.25□□□□□ -0.93
VEGFA-225ENST00000523950 TRPT1Q86TN4 253 aaKnown RBP9.25□□□□□ -0.93
VEGFA-225ENST00000523950 BPIFA4PQ86YQ2 179 aa9.25□□□□□ -0.93
VEGFA-225ENST00000523950 ZNF709Q8N972 641 aa9.25□□□□□ -0.93
VEGFA-225ENST00000523950 GATAD1Q8WUU5 269 aa9.25□□□□□ -0.93
VEGFA-225ENST00000523950 TMEM37Q8WXS4 190 aa9.25□□□□□ -0.93
VEGFA-225ENST00000523950 C16orf92Q96LL3 132 aa9.25□□□□□ -0.93
VEGFA-225ENST00000523950 RSG1Q9BU20 258 aa9.25□□□□□ -0.93
VEGFA-225ENST00000523950 PARD6GQ9BYG4 376 aaPredicted RBP9.25□□□□□ -0.93
VEGFA-225ENST00000523950 COL7A1Q02388 2944 aa9.24□□□□□ -0.93
VEGFA-225ENST00000523950 JTBO76095 146 aa9.24□□□□□ -0.93
VEGFA-225ENST00000523950 IFNA5P01569 189 aa9.24□□□□□ -0.93
VEGFA-225ENST00000523950 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.24□□□□□ -0.93
VEGFA-225ENST00000523950 MRPS12O15235 138 aaKnown RBP9.23□□□□□ -0.93
VEGFA-225ENST00000523950 SPRY2O43597 315 aa9.23□□□□□ -0.93
VEGFA-225ENST00000523950 HLA-DRB4P13762 266 aa9.23□□□□□ -0.93
VEGFA-225ENST00000523950 BLOC1S1P78537 153 aa9.23□□□□□ -0.93
VEGFA-225ENST00000523950 ACTL10Q5JWF8 245 aa9.23□□□□□ -0.93
VEGFA-225ENST00000523950 FOXI2Q6ZQN5 318 aa9.23□□□□□ -0.93
VEGFA-225ENST00000523950 SCGB1C1Q8TD33 95 aa9.23□□□□□ -0.93
VEGFA-225ENST00000523950 RNF183Q96D59 192 aa9.23□□□□□ -0.93
VEGFA-225ENST00000523950 LINC00052Q96N35 136 aa9.23□□□□□ -0.93
VEGFA-225ENST00000523950 CLUHP3Q96NS8 147 aa9.23□□□□□ -0.93
VEGFA-225ENST00000523950 OVOL2Q9BRP0 275 aa9.23□□□□□ -0.93
VEGFA-225ENST00000523950 SAV1Q9H4B6 383 aaPredicted RBP9.23□□□□□ -0.93
VEGFA-225ENST00000523950 EDA2RQ9HAV5 297 aa9.23□□□□□ -0.93
VEGFA-225ENST00000523950 RETNQ9HD89 108 aa9.23□□□□□ -0.93
VEGFA-225ENST00000523950 RPRMQ9NS64 109 aa9.23□□□□□ -0.93
VEGFA-225ENST00000523950 HLA-DRB4X5D2U9 266 aa9.23□□□□□ -0.93
VEGFA-225ENST00000523950 KNCNA6PVL3 124 aa9.22□□□□□ -0.93
VEGFA-225ENST00000523950 NUTF2P61970 127 aaKnown RBP9.22□□□□□ -0.93
VEGFA-225ENST00000523950 ZNF266Q14584 549 aa9.22□□□□□ -0.93
VEGFA-225ENST00000523950 DEFB135Q30KP9 77 aa9.22□□□□□ -0.93
VEGFA-225ENST00000523950 LCN15Q6UWW0 184 aa9.22□□□□□ -0.93
VEGFA-225ENST00000523950 C17orf77Q96MU5 243 aa9.22□□□□□ -0.93
VEGFA-225ENST00000523950 SLC50A1Q9BRV3 221 aa9.22□□□□□ -0.93
VEGFA-225ENST00000523950 CLEC5AQ9NY25 188 aa9.22□□□□□ -0.93
VEGFA-225ENST00000523950 BORCS7-ASMTA0A0B4J1R7 106 aa9.21□□□□□ -0.94
VEGFA-225ENST00000523950 H3BMM0 161 aa9.21□□□□□ -0.94
VEGFA-225ENST00000523950 CA1P00915 261 aaPredicted RBP9.21□□□□□ -0.94
VEGFA-225ENST00000523950 RAB5CP51148 216 aa9.21□□□□□ -0.94
VEGFA-225ENST00000523950 GUK1Q16774 197 aa9.21□□□□□ -0.94
VEGFA-225ENST00000523950 EBLN2Q6P2I7 272 aa9.21□□□□□ -0.94
VEGFA-225ENST00000523950 SVBPQ8N300 66 aa9.21□□□□□ -0.94
VEGFA-225ENST00000523950 C1QTNF4Q9BXJ3 329 aa9.21□□□□□ -0.94
VEGFA-225ENST00000523950 MRPL32Q9BYC8 188 aaKnown RBP9.21□□□□□ -0.94
VEGFA-225ENST00000523950 SMIM3Q9BZL3 60 aa9.21□□□□□ -0.94
VEGFA-225ENST00000523950 HRH4Q9H3N8 390 aa9.21□□□□□ -0.94
VEGFA-225ENST00000523950 CYTL1Q9NRR1 136 aa9.21□□□□□ -0.94
VEGFA-225ENST00000523950 TMEM14CQ9P0S9 112 aa9.21□□□□□ -0.94
VEGFA-225ENST00000523950 IGLC2P0DOY2 106 aa9.2□□□□□ -0.94
VEGFA-225ENST00000523950 MORN5Q5VZ52 161 aa9.2□□□□□ -0.94
VEGFA-225ENST00000523950 PCNPQ8WW12 178 aaKnown RBP9.2□□□□□ -0.94
VEGFA-225ENST00000523950 TMA7Q9Y2S6 64 aaKnown RBP9.2□□□□□ -0.94
VEGFA-225ENST00000523950 CARHSP1Q9Y2V2 147 aaKnown RBP9.2□□□□□ -0.94
VEGFA-225ENST00000523950 TIMM9Q9Y5J7 89 aa9.2□□□□□ -0.94
VEGFA-225ENST00000523950 AGRNO00468 2067 aa9.2□□□□□ -0.94
VEGFA-225ENST00000523950 TRAV8-2A0A0B4J237 113 aa9.19□□□□□ -0.94
VEGFA-225ENST00000523950 A0A0J9YX75 114 aa9.19□□□□□ -0.94
VEGFA-225ENST00000523950 ZNF253O75346 499 aa9.19□□□□□ -0.94
VEGFA-225ENST00000523950 SULT1A2P50226 295 aa9.19□□□□□ -0.94
VEGFA-225ENST00000523950 C10orf91Q5T1B1 145 aa9.19□□□□□ -0.94
VEGFA-225ENST00000523950 FAM78BQ5VT40 261 aa9.19□□□□□ -0.94
VEGFA-225ENST00000523950 C20orf173Q96LM9 149 aa9.19□□□□□ -0.94
VEGFA-225ENST00000523950 ZNF331Q9NQX6 463 aaPredicted RBP9.19□□□□□ -0.94
VEGFA-225ENST00000523950 LOC105371267A0A1B0GV96 52 aa9.18□□□□□ -0.94
VEGFA-225ENST00000523950 TMEM218A2RU14 115 aa9.18□□□□□ -0.94
VEGFA-225ENST00000523950 A8MTW9 85 aa9.18□□□□□ -0.94
VEGFA-225ENST00000523950 C3orf84H3BNL1 204 aa9.18□□□□□ -0.94
VEGFA-225ENST00000523950 DUSP14O95147 198 aaKnown RBP9.18□□□□□ -0.94
VEGFA-225ENST00000523950 SEC11BP0C7V7 166 aa9.18□□□□□ -0.94
VEGFA-225ENST00000523950 PDE6HQ13956 83 aa9.18□□□□□ -0.94
VEGFA-225ENST00000523950 PSG3Q16557 428 aa9.18□□□□□ -0.94
VEGFA-225ENST00000523950 FFAR4Q5NUL3 377 aa9.18□□□□□ -0.94
VEGFA-225ENST00000523950 GDF5OSQ5U4N7 250 aa9.18□□□□□ -0.94
VEGFA-225ENST00000523950 ZNF738Q8NE65 137 aa9.18□□□□□ -0.94
VEGFA-225ENST00000523950 IL17DQ8TAD2 202 aa9.18□□□□□ -0.94
VEGFA-225ENST00000523950 MUC7Q8TAX7 377 aa9.18□□□□□ -0.94
VEGFA-225ENST00000523950 SEC11CQ9BY50 192 aa9.18□□□□□ -0.94
VEGFA-225ENST00000523950 WFDC1Q9HC57 220 aa9.18□□□□□ -0.94
VEGFA-225ENST00000523950 TRAV5A0A0B4J249 113 aa9.17□□□□□ -0.94
VEGFA-225ENST00000523950 SNAPINO95295 136 aa9.17□□□□□ -0.94
VEGFA-225ENST00000523950 GIG44P09565 113 aaPredicted RBP9.17□□□□□ -0.94
VEGFA-225ENST00000523950 HIST1H1EP10412 219 aaKnown RBP9.17□□□□□ -0.94
VEGFA-225ENST00000523950 ACOT6Q3I5F7 207 aaPredicted RBP9.17□□□□□ -0.94
VEGFA-225ENST00000523950 GCSAMLQ5JQS6 135 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms