RNA–Protein interactions for RNA: ENST00000522900.5

SPIDR-220, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 692 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-220ENST00000522900 PXDC1Q5TGL8 231 aa13.35□□□□□ -0.27
SPIDR-220ENST00000522900 LINC00305Q7Z4B0 112 aa13.35□□□□□ -0.27
SPIDR-220ENST00000522900 IGF2BP2-AS1Q96M15 143 aa13.35□□□□□ -0.27
SPIDR-220ENST00000522900 RNF126Q9BV68 326 aa13.35□□□□□ -0.27
SPIDR-220ENST00000522900 KMT2AQ03164 3969 aa13.34□□□□□ -0.27
SPIDR-220ENST00000522900 IGSF23A1L1A6 192 aa13.34□□□□□ -0.27
SPIDR-220ENST00000522900 HBE1P02100 147 aa13.34□□□□□ -0.27
SPIDR-220ENST00000522900 PSG3Q16557 428 aa13.34□□□□□ -0.27
SPIDR-220ENST00000522900 FAM222AQ5U5X8 452 aa13.34□□□□□ -0.27
SPIDR-220ENST00000522900 NRARPQ7Z6K4 114 aa13.34□□□□□ -0.27
SPIDR-220ENST00000522900 DKK2Q9UBU2 259 aa13.34□□□□□ -0.27
SPIDR-220ENST00000522900 LOC102723971A0A1B0GUV8 181 aa13.33□□□□□ -0.28
SPIDR-220ENST00000522900 H3BTX0 84 aa13.33□□□□□ -0.28
SPIDR-220ENST00000522900 COX7A2P2O60397 106 aa13.33□□□□□ -0.28
SPIDR-220ENST00000522900 CAMLGP49069 296 aa13.33□□□□□ -0.28
SPIDR-220ENST00000522900 MIC13Q5XKP0 118 aa13.33□□□□□ -0.28
SPIDR-220ENST00000522900 S100A7AQ86SG5 101 aa13.33□□□□□ -0.28
SPIDR-220ENST00000522900 TMEM252Q8N6L7 170 aa13.33□□□□□ -0.28
SPIDR-220ENST00000522900 LRRC20Q8TCA0 184 aa13.33□□□□□ -0.28
SPIDR-220ENST00000522900 WDR83OSQ9Y284 106 aa13.33□□□□□ -0.28
SPIDR-220ENST00000522900 TRAV12-2A0A075B6T6 113 aa13.32□□□□□ -0.28
SPIDR-220ENST00000522900 UPK1BO75841 260 aa13.32□□□□□ -0.28
SPIDR-220ENST00000522900 SIX6O95475 246 aa13.32□□□□□ -0.28
SPIDR-220ENST00000522900 PVALBP20472 110 aaPredicted RBP13.32□□□□□ -0.28
SPIDR-220ENST00000522900 HIST1H1AQ02539 215 aaPredicted RBP13.32□□□□□ -0.28
SPIDR-220ENST00000522900 OPCMLQ14982 345 aa13.32□□□□□ -0.28
SPIDR-220ENST00000522900 RRN3P1Q2M238 152 aa13.32□□□□□ -0.28
SPIDR-220ENST00000522900 C10orf113Q5VZT2 155 aa13.32□□□□□ -0.28
SPIDR-220ENST00000522900 BAP18Q8IXM2 172 aa13.32□□□□□ -0.28
SPIDR-220ENST00000522900 OR8A1Q8NGG7 326 aa13.32□□□□□ -0.28
SPIDR-220ENST00000522900 LYRM2Q9NU23 88 aaPredicted RBP13.32□□□□□ -0.28
SPIDR-220ENST00000522900 UQCC1Q9NVA1 299 aa13.32□□□□□ -0.28
SPIDR-220ENST00000522900 YTHDF2Q9Y5A9 579 aaKnown RBP13.32□□□□□ -0.28
SPIDR-220ENST00000522900 TRAV5A0A0B4J249 113 aa13.31□□□□□ -0.28
SPIDR-220ENST00000522900 ZNF705GA8MUZ8 300 aaPredicted RBP13.31□□□□□ -0.28
SPIDR-220ENST00000522900 AMBPP02760 352 aa13.31□□□□□ -0.28
SPIDR-220ENST00000522900 SULT1A1P50225 295 aa13.31□□□□□ -0.28
SPIDR-220ENST00000522900 RHOBP62745 196 aa13.31□□□□□ -0.28
SPIDR-220ENST00000522900 VWC2Q2TAL6 325 aa13.31□□□□□ -0.28
SPIDR-220ENST00000522900 NIPSNAP3BQ9BS92 247 aa13.31□□□□□ -0.28
SPIDR-220ENST00000522900 TMEM208Q9BTX3 173 aa13.31□□□□□ -0.28
SPIDR-220ENST00000522900 DNAJC4Q9NNZ3 241 aa13.31□□□□□ -0.28
SPIDR-220ENST00000522900 ZNF331Q9NQX6 463 aaPredicted RBP13.31□□□□□ -0.28
SPIDR-220ENST00000522900 H3BQ15 152 aa13.3□□□□□ -0.28
SPIDR-220ENST00000522900 SLC17A3O00476 420 aa13.3□□□□□ -0.28
SPIDR-220ENST00000522900 RAB31Q13636 194 aa13.3□□□□□ -0.28
SPIDR-220ENST00000522900 BPIFA4PQ86YQ2 179 aa13.3□□□□□ -0.28
SPIDR-220ENST00000522900 ENKURQ8TC29 256 aa13.3□□□□□ -0.28
SPIDR-220ENST00000522900 RPUSD4Q96CM3 377 aaKnown RBP13.3□□□□□ -0.28
SPIDR-220ENST00000522900 UBE2L5PA0A1B0GUS4 154 aa13.29□□□□□ -0.28
SPIDR-220ENST00000522900 BOLA2-SMG1P6H3BVE0 249 aa13.29□□□□□ -0.28
SPIDR-220ENST00000522900 INSP01308 110 aa13.29□□□□□ -0.28
SPIDR-220ENST00000522900 S100A11P31949 105 aa13.29□□□□□ -0.28
SPIDR-220ENST00000522900 RNF24Q9Y225 148 aa13.29□□□□□ -0.28
SPIDR-220ENST00000522900 PRAC2D3DTV9 90 aa13.28□□□□□ -0.28
SPIDR-220ENST00000522900 IGLC2P0DOY2 106 aa13.28□□□□□ -0.28
SPIDR-220ENST00000522900 CXCL2P19875 107 aa13.28□□□□□ -0.28
SPIDR-220ENST00000522900 AZU1P20160 251 aa13.28□□□□□ -0.28
SPIDR-220ENST00000522900 LCN15Q6UWW0 184 aa13.28□□□□□ -0.28
SPIDR-220ENST00000522900 Q6ZRG5 221 aa13.28□□□□□ -0.28
SPIDR-220ENST00000522900 NDUFAF3Q9BU61 184 aa13.28□□□□□ -0.28
SPIDR-220ENST00000522900 GPN1Q9HCN4 374 aaPredicted RBP13.28□□□□□ -0.28
SPIDR-220ENST00000522900 PTTG2Q9NZH5 202 aa13.28□□□□□ -0.28
SPIDR-220ENST00000522900 HTN3P15516 51 aa13.27□□□□□ -0.29
SPIDR-220ENST00000522900 RPL29P47914 159 aaKnown RBP13.27□□□□□ -0.29
SPIDR-220ENST00000522900 BAXQ07812 192 aa13.27□□□□□ -0.29
SPIDR-220ENST00000522900 STX12Q86Y82 276 aa13.27□□□□□ -0.29
SPIDR-220ENST00000522900 SAT2Q96F10 170 aaPredicted RBP13.27□□□□□ -0.29
SPIDR-220ENST00000522900 SLC50A1Q9BRV3 221 aa13.27□□□□□ -0.29
SPIDR-220ENST00000522900 SLC39A9Q9NUM3 307 aa13.27□□□□□ -0.29
SPIDR-220ENST00000522900 PPP1R14DQ9NXH3 145 aa13.27□□□□□ -0.29
SPIDR-220ENST00000522900 TEX48A0A1B0GUV7 120 aa13.26□□□□□ -0.29
SPIDR-220ENST00000522900 FGF7P21781 194 aa13.26□□□□□ -0.29
SPIDR-220ENST00000522900 B2MP61769 119 aa13.26□□□□□ -0.29
SPIDR-220ENST00000522900 HBG1P69891 147 aa13.26□□□□□ -0.29
SPIDR-220ENST00000522900 HBG2P69892 147 aa13.26□□□□□ -0.29
SPIDR-220ENST00000522900 NHLH2Q02577 135 aa13.26□□□□□ -0.29
SPIDR-220ENST00000522900 KIR3DS1Q14943 382 aa13.26□□□□□ -0.29
SPIDR-220ENST00000522900 ATP6V1FQ16864 119 aa13.26□□□□□ -0.29
SPIDR-220ENST00000522900 OR1L4Q8NGR5 311 aa13.26□□□□□ -0.29
SPIDR-220ENST00000522900 CHAC2Q8WUX2 184 aa13.26□□□□□ -0.29
SPIDR-220ENST00000522900 PARD6GQ9BYG4 376 aaPredicted RBP13.26□□□□□ -0.29
SPIDR-220ENST00000522900 OR5AC2Q9NZP5 309 aa13.26□□□□□ -0.29
SPIDR-220ENST00000522900 DNAH10Q8IVF4 4471 aa13.26□□□□□ -0.29
SPIDR-220ENST00000522900 PLAC8L1A1L4L8 177 aa13.25□□□□□ -0.29
SPIDR-220ENST00000522900 INMT-MINDY4F8WBC2 141 aa13.25□□□□□ -0.29
SPIDR-220ENST00000522900 H0YIZ8 118 aa13.25□□□□□ -0.29
SPIDR-220ENST00000522900 OXA1LQ15070 435 aa13.25□□□□□ -0.29
SPIDR-220ENST00000522900 FCN2Q15485 313 aa13.25□□□□□ -0.29
SPIDR-220ENST00000522900 LINC01587Q99440 93 aa13.25□□□□□ -0.29
SPIDR-220ENST00000522900 ZNF586Q9NXT0 402 aa13.25□□□□□ -0.29
SPIDR-220ENST00000522900 PXMP4Q9Y6I8 212 aa13.25□□□□□ -0.29
SPIDR-220ENST00000522900 DAD1P61803 113 aa13.24□□□□□ -0.29
SPIDR-220ENST00000522900 LRRC37A5PQ49AS3 106 aa13.24□□□□□ -0.29
SPIDR-220ENST00000522900 GCSAMLQ5JQS6 135 aa13.24□□□□□ -0.29
SPIDR-220ENST00000522900 PFDN5Q99471 154 aa13.24□□□□□ -0.29
SPIDR-220ENST00000522900 FRAS1Q86XX4 4008 aa13.23□□□□□ -0.29
SPIDR-220ENST00000522900 HTN1P15515 57 aa13.23□□□□□ -0.29
SPIDR-220ENST00000522900 TSPOP30536 169 aa13.23□□□□□ -0.29
SPIDR-220ENST00000522900 CDKN1BP46527 198 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms