RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 DNAJC4Q9NNZ3 241 aa9.6□□□□□ -0.87
VEGFA-219ENST00000518824 CELA1Q9UNI1 258 aa9.6□□□□□ -0.87
VEGFA-219ENST00000518824 RFNGQ9Y644 331 aa9.6□□□□□ -0.87
VEGFA-219ENST00000518824 PLECQ15149 4684 aaKnown RBP9.59□□□□□ -0.87
VEGFA-219ENST00000518824 IGHV3OR16-12A0A075B7B8 117 aa9.59□□□□□ -0.87
VEGFA-219ENST00000518824 ZNF705FA8MVS1 300 aaPredicted RBP9.59□□□□□ -0.87
VEGFA-219ENST00000518824 PTTG1O95997 202 aa9.59□□□□□ -0.87
VEGFA-219ENST00000518824 PRM2P04554 102 aa9.59□□□□□ -0.87
VEGFA-219ENST00000518824 CNN1P51911 297 aaKnown RBP9.59□□□□□ -0.87
VEGFA-219ENST00000518824 CYCSP99999 105 aaKnown RBP9.59□□□□□ -0.87
VEGFA-219ENST00000518824 PSG9Q00887 426 aa9.59□□□□□ -0.87
VEGFA-219ENST00000518824 RAB31Q13636 194 aa9.59□□□□□ -0.87
VEGFA-219ENST00000518824 FCN2Q15485 313 aa9.59□□□□□ -0.87
VEGFA-219ENST00000518824 CEMP1Q6PRD7 247 aaPredicted RBP9.59□□□□□ -0.87
VEGFA-219ENST00000518824 ZNF705AQ6ZN79 300 aaPredicted RBP9.59□□□□□ -0.87
VEGFA-219ENST00000518824 C1orf158Q8N1D5 194 aa9.59□□□□□ -0.87
VEGFA-219ENST00000518824 ZNF738Q8NE65 137 aa9.59□□□□□ -0.87
VEGFA-219ENST00000518824 OR11H7Q8NGC8 314 aa9.59□□□□□ -0.87
VEGFA-219ENST00000518824 C11orf45Q8TAV5 145 aa9.59□□□□□ -0.87
VEGFA-219ENST00000518824 CHAC2Q8WUX2 184 aa9.59□□□□□ -0.87
VEGFA-219ENST00000518824 PHLDA1Q8WV24 401 aaPredicted RBP9.59□□□□□ -0.87
VEGFA-219ENST00000518824 CLUHP3Q96NS8 147 aa9.59□□□□□ -0.87
VEGFA-219ENST00000518824 NPCDR1Q9BY65 106 aa9.59□□□□□ -0.87
VEGFA-219ENST00000518824 SMIM3Q9BZL3 60 aa9.59□□□□□ -0.87
VEGFA-219ENST00000518824 MFFQ9GZY8 342 aa9.59□□□□□ -0.87
VEGFA-219ENST00000518824 SLC25A31Q9H0C2 315 aa9.59□□□□□ -0.87
VEGFA-219ENST00000518824 MBD2Q9UBB5 411 aa9.59□□□□□ -0.87
VEGFA-219ENST00000518824 ALMS1Q8TCU4 4167 aa9.58□□□□□ -0.88
VEGFA-219ENST00000518824 PRAC2D3DTV9 90 aa9.58□□□□□ -0.88
VEGFA-219ENST00000518824 M0R2Z0 102 aa9.58□□□□□ -0.88
VEGFA-219ENST00000518824 IGLC2P0DOY2 106 aa9.58□□□□□ -0.88
VEGFA-219ENST00000518824 S100A7P31151 101 aa9.58□□□□□ -0.88
VEGFA-219ENST00000518824 PSG3Q16557 428 aa9.58□□□□□ -0.88
VEGFA-219ENST00000518824 SPINK13Q1W4C9 94 aa9.58□□□□□ -0.88
VEGFA-219ENST00000518824 Q6ZRG5 221 aa9.58□□□□□ -0.88
VEGFA-219ENST00000518824 ZNF767PQ75MW2 155 aa9.58□□□□□ -0.88
VEGFA-219ENST00000518824 SAT2Q96F10 170 aaPredicted RBP9.58□□□□□ -0.88
VEGFA-219ENST00000518824 WFDC1Q9HC57 220 aa9.58□□□□□ -0.88
VEGFA-219ENST00000518824 ZNF331Q9NQX6 463 aaPredicted RBP9.58□□□□□ -0.88
VEGFA-219ENST00000518824 ZNF586Q9NXT0 402 aa9.58□□□□□ -0.88
VEGFA-219ENST00000518824 HSPB11Q9Y547 144 aa9.58□□□□□ -0.88
VEGFA-219ENST00000518824 CRXO43186 299 aaPredicted RBP9.57□□□□□ -0.88
VEGFA-219ENST00000518824 MIFP14174 115 aa9.57□□□□□ -0.88
VEGFA-219ENST00000518824 NUTF2P61970 127 aaKnown RBP9.57□□□□□ -0.88
VEGFA-219ENST00000518824 Q5BKY6 102 aa9.57□□□□□ -0.88
VEGFA-219ENST00000518824 SAMD13Q5VXD3 122 aa9.57□□□□□ -0.88
VEGFA-219ENST00000518824 BPIFA4PQ86YQ2 179 aa9.57□□□□□ -0.88
VEGFA-219ENST00000518824 OR8A1Q8NGG7 326 aa9.57□□□□□ -0.88
VEGFA-219ENST00000518824 OR1L4Q8NGR5 311 aa9.57□□□□□ -0.88
VEGFA-219ENST00000518824 C1QTNF4Q9BXJ3 329 aa9.57□□□□□ -0.88
VEGFA-219ENST00000518824 WDR61Q9GZS3 305 aaKnown RBP9.57□□□□□ -0.88
VEGFA-219ENST00000518824 DNAH1Q9P2D7 4330 aa9.56□□□□□ -0.88
VEGFA-219ENST00000518824 NUPR2A6NF83 97 aa9.56□□□□□ -0.88
VEGFA-219ENST00000518824 EIF3GO75821 320 aaKnown RBP eCLIP9.56□□□□□ -0.88
VEGFA-219ENST00000518824 PYYP10082 97 aa9.56□□□□□ -0.88
VEGFA-219ENST00000518824 RPL12P30050 165 aaKnown RBP9.56□□□□□ -0.88
VEGFA-219ENST00000518824 HIST1H1AQ02539 215 aaPredicted RBP9.56□□□□□ -0.88
VEGFA-219ENST00000518824 KIR3DS1Q14943 382 aa9.56□□□□□ -0.88
VEGFA-219ENST00000518824 MIR17HGQ75NE6 70 aa9.56□□□□□ -0.88
VEGFA-219ENST00000518824 BAP18Q8IXM2 172 aa9.56□□□□□ -0.88
VEGFA-219ENST00000518824 LRRC20Q8TCA0 184 aa9.56□□□□□ -0.88
VEGFA-219ENST00000518824 RPUSD4Q96CM3 377 aaKnown RBP9.56□□□□□ -0.88
VEGFA-219ENST00000518824 FAM167A-AS1Q96KT0 104 aa9.56□□□□□ -0.88
VEGFA-219ENST00000518824 PARD6GQ9BYG4 376 aaPredicted RBP9.56□□□□□ -0.88
VEGFA-219ENST00000518824 PLA2G2EQ9NZK7 142 aa9.56□□□□□ -0.88
VEGFA-219ENST00000518824 RYR2Q92736 4967 aa9.55□□□□□ -0.88
VEGFA-219ENST00000518824 TRAV12-2A0A075B6T6 113 aa9.55□□□□□ -0.88
VEGFA-219ENST00000518824 LCN15Q6UWW0 184 aa9.55□□□□□ -0.88
VEGFA-219ENST00000518824 Q6ZTC4 211 aa9.55□□□□□ -0.88
VEGFA-219ENST00000518824 PFDN5Q99471 154 aa9.55□□□□□ -0.88
VEGFA-219ENST00000518824 ATP5SQ99766 215 aa9.55□□□□□ -0.88
VEGFA-219ENST00000518824 SLC25A2Q9BXI2 301 aa9.55□□□□□ -0.88
VEGFA-219ENST00000518824 HRH4Q9H3N8 390 aa9.55□□□□□ -0.88
VEGFA-219ENST00000518824 MPDU1O75352 247 aa9.54□□□□□ -0.88
VEGFA-219ENST00000518824 DUSP14O95147 198 aaKnown RBP9.54□□□□□ -0.88
VEGFA-219ENST00000518824 NDUFB4O95168 129 aa9.54□□□□□ -0.88
VEGFA-219ENST00000518824 EMP1P54849 157 aa9.54□□□□□ -0.88
VEGFA-219ENST00000518824 C12orf74Q32Q52 190 aa9.54□□□□□ -0.88
VEGFA-219ENST00000518824 S100A7AQ86SG5 101 aa9.54□□□□□ -0.88
VEGFA-219ENST00000518824 IGF2BP2-AS1Q96M15 143 aa9.54□□□□□ -0.88
VEGFA-219ENST00000518824 NEU1Q99519 415 aa9.54□□□□□ -0.88
VEGFA-219ENST00000518824 MED28Q9H204 178 aa9.54□□□□□ -0.88
VEGFA-219ENST00000518824 ZNF705GA8MUZ8 300 aaPredicted RBP9.53□□□□□ -0.88
VEGFA-219ENST00000518824 M0R3E3 92 aa9.53□□□□□ -0.88
VEGFA-219ENST00000518824 CXCL2P19875 107 aa9.53□□□□□ -0.88
VEGFA-219ENST00000518824 RHOBP62745 196 aa9.53□□□□□ -0.88
VEGFA-219ENST00000518824 LINC00476Q8WZB0 136 aa9.53□□□□□ -0.88
VEGFA-219ENST00000518824 SLC50A1Q9BRV3 221 aa9.53□□□□□ -0.88
VEGFA-219ENST00000518824 TRBV19A0A075B6N1 114 aa9.52□□□□□ -0.89
VEGFA-219ENST00000518824 BOLA2-SMG1P6H3BVE0 249 aa9.52□□□□□ -0.89
VEGFA-219ENST00000518824 JTBO76095 146 aa9.52□□□□□ -0.89
VEGFA-219ENST00000518824 PET100P0DJ07 73 aa9.52□□□□□ -0.89
VEGFA-219ENST00000518824 EXOC3-AS1Q8N2X6 119 aa9.52□□□□□ -0.89
VEGFA-219ENST00000518824 BLNKQ8WV28 456 aa9.52□□□□□ -0.89
VEGFA-219ENST00000518824 ZNF503Q96F45 646 aa9.52□□□□□ -0.89
VEGFA-219ENST00000518824 TMEM14CQ9P0S9 112 aa9.52□□□□□ -0.89
VEGFA-219ENST00000518824 RNF24Q9Y225 148 aa9.52□□□□□ -0.89
VEGFA-219ENST00000518824 GOLT1BQ9Y3E0 138 aa9.52□□□□□ -0.89
VEGFA-219ENST00000518824 HYDINQ4G0P3 5121 aa9.52□□□□□ -0.89
VEGFA-219ENST00000518824 LY6G6CO95867 125 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms