RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 RNF222A6NCQ9 220 aa16.08■□□□□ 0.16
VEGFA-217ENST00000518538 C4BPBP20851 252 aa16.08■□□□□ 0.16
VEGFA-217ENST00000518538 NUTF2P61970 127 aaKnown RBP16.08■□□□□ 0.16
VEGFA-217ENST00000518538 FFAR4Q5NUL3 377 aa16.08■□□□□ 0.16
VEGFA-217ENST00000518538 MRPL32Q9BYC8 188 aaKnown RBP16.08■□□□□ 0.16
VEGFA-217ENST00000518538 ZNF331Q9NQX6 463 aaPredicted RBP16.08■□□□□ 0.16
VEGFA-217ENST00000518538 TMEM14CQ9P0S9 112 aa16.08■□□□□ 0.16
VEGFA-217ENST00000518538 STAB2Q8WWQ8 2551 aa16.07■□□□□ 0.16
VEGFA-217ENST00000518538 A0A0J9YX75 114 aa16.07■□□□□ 0.16
VEGFA-217ENST00000518538 F6UB75 175 aa16.07■□□□□ 0.16
VEGFA-217ENST00000518538 GUK1Q16774 197 aa16.07■□□□□ 0.16
VEGFA-217ENST00000518538 ZNF738Q8NE65 137 aa16.07■□□□□ 0.16
VEGFA-217ENST00000518538 NBEAL2Q6ZNJ1 2754 aa16.06■□□□□ 0.16
VEGFA-217ENST00000518538 H3BQ15 152 aa16.06■□□□□ 0.16
VEGFA-217ENST00000518538 SNRPCP09234 159 aaKnown RBP16.06■□□□□ 0.16
VEGFA-217ENST00000518538 SLC25A2Q9BXI2 301 aa16.06■□□□□ 0.16
VEGFA-217ENST00000518538 TIMM9Q9Y5J7 89 aa16.06■□□□□ 0.16
VEGFA-217ENST00000518538 SLC17A3O00476 420 aa16.05■□□□□ 0.16
VEGFA-217ENST00000518538 HLA-DMBP28068 263 aa16.05■□□□□ 0.16
VEGFA-217ENST00000518538 PSG3Q16557 428 aa16.05■□□□□ 0.16
VEGFA-217ENST00000518538 MIR17HGQ75NE6 70 aa16.05■□□□□ 0.16
VEGFA-217ENST00000518538 OR4B1Q8NGF8 309 aa16.05■□□□□ 0.16
VEGFA-217ENST00000518538 SAT2Q96F10 170 aaPredicted RBP16.05■□□□□ 0.16
VEGFA-217ENST00000518538 C1QTNF4Q9BXJ3 329 aa16.05■□□□□ 0.16
VEGFA-217ENST00000518538 FUT9Q9Y231 359 aa16.05■□□□□ 0.16
VEGFA-217ENST00000518538 H3BTX0 84 aa16.04■□□□□ 0.16
VEGFA-217ENST00000518538 ZNF253O75346 499 aa16.04■□□□□ 0.16
VEGFA-217ENST00000518538 IGKV3-20P01619 116 aa16.04■□□□□ 0.16
VEGFA-217ENST00000518538 MUC7Q8TAX7 377 aa16.04■□□□□ 0.16
VEGFA-217ENST00000518538 FAM167A-AS1Q96KT0 104 aa16.04■□□□□ 0.16
VEGFA-217ENST00000518538 RARRES2Q99969 163 aa16.04■□□□□ 0.16
VEGFA-217ENST00000518538 ZNF586Q9NXT0 402 aa16.04■□□□□ 0.16
VEGFA-217ENST00000518538 RFNGQ9Y644 331 aa16.04■□□□□ 0.16
VEGFA-217ENST00000518538 A8MTW9 85 aa16.03■□□□□ 0.16
VEGFA-217ENST00000518538 DUSP14O95147 198 aaKnown RBP16.03■□□□□ 0.16
VEGFA-217ENST00000518538 HIST1H1EP10412 219 aaKnown RBP16.03■□□□□ 0.16
VEGFA-217ENST00000518538 OR11H2Q8NH07 326 aa16.03■□□□□ 0.16
VEGFA-217ENST00000518538 CLEC5AQ9NY25 188 aa16.03■□□□□ 0.16
VEGFA-217ENST00000518538 TRBV19A0A075B6N1 114 aa16.02■□□□□ 0.16
VEGFA-217ENST00000518538 SMLR1H3BR10 107 aa16.02■□□□□ 0.16
VEGFA-217ENST00000518538 PYYP10082 97 aa16.02■□□□□ 0.16
VEGFA-217ENST00000518538 PSG9Q00887 426 aa16.02■□□□□ 0.16
VEGFA-217ENST00000518538 ACOT6Q3I5F7 207 aaPredicted RBP16.02■□□□□ 0.16
VEGFA-217ENST00000518538 HSD17B11Q8NBQ5 300 aa16.02■□□□□ 0.16
VEGFA-217ENST00000518538 CSNK1G2-AS1Q8NCQ2 148 aa16.02■□□□□ 0.16
VEGFA-217ENST00000518538 ARPC5O15511 151 aa16.01■□□□□ 0.15
VEGFA-217ENST00000518538 M6PRP20645 277 aa16.01■□□□□ 0.15
VEGFA-217ENST00000518538 CNN1P51911 297 aaKnown RBP16.01■□□□□ 0.15
VEGFA-217ENST00000518538 RHOBP62745 196 aa16.01■□□□□ 0.15
VEGFA-217ENST00000518538 PDE6HQ13956 83 aa16.01■□□□□ 0.15
VEGFA-217ENST00000518538 RPUSD4Q96CM3 377 aaKnown RBP16.01■□□□□ 0.15
VEGFA-217ENST00000518538 PSMG3Q9BT73 122 aaPredicted RBP16.01■□□□□ 0.15
VEGFA-217ENST00000518538 OR51M1Q9H341 326 aa16.01■□□□□ 0.15
VEGFA-217ENST00000518538 XCL2Q9UBD3 114 aa16.01■□□□□ 0.15
VEGFA-217ENST00000518538 BORCS7-ASMTA0A0B4J1R7 106 aa16■□□□□ 0.15
VEGFA-217ENST00000518538 A0A0J9YWU9 116 aa16■□□□□ 0.15
VEGFA-217ENST00000518538 C3orf84H3BNL1 204 aa16■□□□□ 0.15
VEGFA-217ENST00000518538 ZNF705DP0CH99 300 aaPredicted RBP16■□□□□ 0.15
VEGFA-217ENST00000518538 ZNF705BP0CI00 300 aaPredicted RBP16■□□□□ 0.15
VEGFA-217ENST00000518538 ATP6V0CP27449 155 aa16■□□□□ 0.15
VEGFA-217ENST00000518538 OR8A1Q8NGG7 326 aa16■□□□□ 0.15
VEGFA-217ENST00000518538 OR2G3Q8NGZ4 309 aa16■□□□□ 0.15
VEGFA-217ENST00000518538 MFFQ9GZY8 342 aa16■□□□□ 0.15
VEGFA-217ENST00000518538 SLC35B3Q9H1N7 401 aa16■□□□□ 0.15
VEGFA-217ENST00000518538 FXYD7P58549 80 aa15.99■□□□□ 0.15
VEGFA-217ENST00000518538 TAS2R45P59539 299 aa15.99■□□□□ 0.15
VEGFA-217ENST00000518538 RPL7L1Q6DKI1 246 aaKnown RBP15.99■□□□□ 0.15
VEGFA-217ENST00000518538 AMTNQ6UX39 209 aa15.99■□□□□ 0.15
VEGFA-217ENST00000518538 Q6ZNX1 250 aa15.99■□□□□ 0.15
VEGFA-217ENST00000518538 PAXXQ9BUH6 204 aa15.99■□□□□ 0.15
VEGFA-217ENST00000518538 ZNF705EA8MWA4 302 aaPredicted RBP15.98■□□□□ 0.15
VEGFA-217ENST00000518538 NDUFB4O95168 129 aa15.98■□□□□ 0.15
VEGFA-217ENST00000518538 RAB2AP61019 212 aa15.98■□□□□ 0.15
VEGFA-217ENST00000518538 HIST1H1AQ02539 215 aaPredicted RBP15.98■□□□□ 0.15
VEGFA-217ENST00000518538 KHDC3LQ587J8 217 aa15.98■□□□□ 0.15
VEGFA-217ENST00000518538 BLNKQ8WV28 456 aa15.98■□□□□ 0.15
VEGFA-217ENST00000518538 FXYD5Q96DB9 178 aa15.98■□□□□ 0.15
VEGFA-217ENST00000518538 ZNF705FA8MVS1 300 aaPredicted RBP15.97■□□□□ 0.15
VEGFA-217ENST00000518538 TAAR5O14804 337 aa15.97■□□□□ 0.15
VEGFA-217ENST00000518538 OR7C2O60412 319 aa15.97■□□□□ 0.15
VEGFA-217ENST00000518538 OR10J4P0C629 311 aa15.97■□□□□ 0.15
VEGFA-217ENST00000518538 NBEAP1P0C6P0 100 aa15.97■□□□□ 0.15
VEGFA-217ENST00000518538 SERF2P84101 59 aa15.97■□□□□ 0.15
VEGFA-217ENST00000518538 IL17DQ8TAD2 202 aa15.97■□□□□ 0.15
VEGFA-217ENST00000518538 RNF141Q8WVD5 230 aa15.97■□□□□ 0.15
VEGFA-217ENST00000518538 GNPNAT1Q96EK6 184 aaPredicted RBP15.97■□□□□ 0.15
VEGFA-217ENST00000518538 MRPL53Q96EL3 112 aaKnown RBP15.97■□□□□ 0.15
VEGFA-217ENST00000518538 ZNF503Q96F45 646 aa15.97■□□□□ 0.15
VEGFA-217ENST00000518538 A0A1W2PPV4 95 aa15.96■□□□□ 0.15
VEGFA-217ENST00000518538 ZNF345Q14585 488 aa15.96■□□□□ 0.15
VEGFA-217ENST00000518538 OR11H4Q8NGC9 324 aa15.96■□□□□ 0.15
VEGFA-217ENST00000518538 OR10G4Q8NGN3 311 aa15.96■□□□□ 0.15
VEGFA-217ENST00000518538 OR10G9Q8NGN4 311 aa15.96■□□□□ 0.15
VEGFA-217ENST00000518538 OR10G7Q8NGN6 311 aa15.96■□□□□ 0.15
VEGFA-217ENST00000518538 SH3BGRL3Q9H299 93 aa15.96■□□□□ 0.15
VEGFA-217ENST00000518538 C11orf68Q9H3H3 251 aaKnown RBP15.96■□□□□ 0.15
VEGFA-217ENST00000518538 PRELID1Q9Y255 219 aa15.96■□□□□ 0.15
VEGFA-217ENST00000518538 X6R8D5 127 aa15.96■□□□□ 0.15
VEGFA-217ENST00000518538 HMSDA8MTL9 139 aa15.95■□□□□ 0.14
VEGFA-217ENST00000518538 JTBO76095 146 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms