RNA–Protein interactions for RNA: ENST00000517660.1

PDGFRB-203, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 611 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-203ENST00000517660 RNF24Q9Y225 148 aa7.59□□□□□ -1.19
PDGFRB-203ENST00000517660 GOLT1BQ9Y3E0 138 aa7.59□□□□□ -1.19
PDGFRB-203ENST00000517660 RFNGQ9Y644 331 aa7.59□□□□□ -1.19
PDGFRB-203ENST00000517660 IGHV3OR16-12A0A075B7B8 117 aa7.58□□□□□ -1.2
PDGFRB-203ENST00000517660 DEFB131BA0A096LNP1 70 aa7.58□□□□□ -1.2
PDGFRB-203ENST00000517660 TRAV8-2A0A0B4J237 113 aa7.58□□□□□ -1.2
PDGFRB-203ENST00000517660 C5orf51A6NDU8 294 aa7.58□□□□□ -1.2
PDGFRB-203ENST00000517660 A8MTW9 85 aa7.58□□□□□ -1.2
PDGFRB-203ENST00000517660 FAM25EA8MYX2 175 aa7.58□□□□□ -1.2
PDGFRB-203ENST00000517660 CCSO14618 274 aa7.58□□□□□ -1.2
PDGFRB-203ENST00000517660 GOSR2O14653 212 aa7.58□□□□□ -1.2
PDGFRB-203ENST00000517660 PRAF2O60831 178 aa7.58□□□□□ -1.2
PDGFRB-203ENST00000517660 DUSP14O95147 198 aaKnown RBP7.58□□□□□ -1.2
PDGFRB-203ENST00000517660 NKX2-5P52952 324 aaPredicted RBP7.58□□□□□ -1.2
PDGFRB-203ENST00000517660 FGL1Q08830 312 aa7.58□□□□□ -1.2
PDGFRB-203ENST00000517660 ARL16Q0P5N6 197 aa7.58□□□□□ -1.2
PDGFRB-203ENST00000517660 TCTE3Q8IZS6 198 aa7.58□□□□□ -1.2
PDGFRB-203ENST00000517660 C12orf45Q8N5I9 185 aaPredicted RBP7.58□□□□□ -1.2
PDGFRB-203ENST00000517660 C2orf50Q96LR7 162 aa7.58□□□□□ -1.2
PDGFRB-203ENST00000517660 SEC22CQ9BRL7 303 aa7.58□□□□□ -1.2
PDGFRB-203ENST00000517660 RNF126Q9BV68 326 aa7.58□□□□□ -1.2
PDGFRB-203ENST00000517660 ARL6Q9H0F7 186 aa7.58□□□□□ -1.2
PDGFRB-203ENST00000517660 IGHV4-4A0A075B6R2 117 aa7.57□□□□□ -1.2
PDGFRB-203ENST00000517660 SSNA1O43805 119 aa7.57□□□□□ -1.2
PDGFRB-203ENST00000517660 HBE1P02100 147 aa7.57□□□□□ -1.2
PDGFRB-203ENST00000517660 AMBPP02760 352 aa7.57□□□□□ -1.2
PDGFRB-203ENST00000517660 EMP1P54849 157 aa7.57□□□□□ -1.2
PDGFRB-203ENST00000517660 SLC38A11Q08AI6 406 aa7.57□□□□□ -1.2
PDGFRB-203ENST00000517660 IGFL4Q6B9Z1 124 aa7.57□□□□□ -1.2
PDGFRB-203ENST00000517660 AMTNQ6UX39 209 aa7.57□□□□□ -1.2
PDGFRB-203ENST00000517660 PATE2Q6UY27 113 aa7.57□□□□□ -1.2
PDGFRB-203ENST00000517660 ZNF767PQ75MW2 155 aa7.57□□□□□ -1.2
PDGFRB-203ENST00000517660 ZNF546Q86UE3 836 aa7.57□□□□□ -1.2
PDGFRB-203ENST00000517660 C1orf158Q8N1D5 194 aa7.57□□□□□ -1.2
PDGFRB-203ENST00000517660 UHRF2Q96PU4 802 aa7.57□□□□□ -1.2
PDGFRB-203ENST00000517660 ARV1Q9H2C2 271 aa7.57□□□□□ -1.2
PDGFRB-203ENST00000517660 GPN1Q9HCN4 374 aaPredicted RBP7.57□□□□□ -1.2
PDGFRB-203ENST00000517660 LSM5Q9Y4Y9 91 aaKnown RBP7.57□□□□□ -1.2
PDGFRB-203ENST00000517660 A0A087X0K7 114 aa7.56□□□□□ -1.2
PDGFRB-203ENST00000517660 TEX48A0A1B0GUV7 120 aa7.56□□□□□ -1.2
PDGFRB-203ENST00000517660 AGPAT2O15120 278 aa7.56□□□□□ -1.2
PDGFRB-203ENST00000517660 PVALBP20472 110 aaPredicted RBP7.56□□□□□ -1.2
PDGFRB-203ENST00000517660 CNN1P51911 297 aaKnown RBP7.56□□□□□ -1.2
PDGFRB-203ENST00000517660 RAB31Q13636 194 aa7.56□□□□□ -1.2
PDGFRB-203ENST00000517660 FCN2Q15485 313 aa7.56□□□□□ -1.2
PDGFRB-203ENST00000517660 RRN3P1Q2M238 152 aa7.56□□□□□ -1.2
PDGFRB-203ENST00000517660 RNF182Q8N6D2 247 aa7.56□□□□□ -1.2
PDGFRB-203ENST00000517660 ZNF738Q8NE65 137 aa7.56□□□□□ -1.2
PDGFRB-203ENST00000517660 LRRC20Q8TCA0 184 aa7.56□□□□□ -1.2
PDGFRB-203ENST00000517660 IGF2BP2-AS1Q96M15 143 aa7.56□□□□□ -1.2
PDGFRB-203ENST00000517660 FAM24AA6NFZ4 105 aa7.55□□□□□ -1.2
PDGFRB-203ENST00000517660 CXCL3P19876 107 aa7.55□□□□□ -1.2
PDGFRB-203ENST00000517660 CAV2P51636 162 aa7.55□□□□□ -1.2
PDGFRB-203ENST00000517660 IL15RAQ13261 267 aa7.55□□□□□ -1.2
PDGFRB-203ENST00000517660 PSG3Q16557 428 aa7.55□□□□□ -1.2
PDGFRB-203ENST00000517660 LINC00305Q7Z4B0 112 aa7.55□□□□□ -1.2
PDGFRB-203ENST00000517660 OR11H7Q8NGC8 314 aa7.55□□□□□ -1.2
PDGFRB-203ENST00000517660 TMEM208Q9BTX3 173 aa7.55□□□□□ -1.2
PDGFRB-203ENST00000517660 C11orf1Q9H5F2 150 aa7.55□□□□□ -1.2
PDGFRB-203ENST00000517660 DKK2Q9UBU2 259 aa7.55□□□□□ -1.2
PDGFRB-203ENST00000517660 LOC102723971A0A1B0GUV8 181 aa7.54□□□□□ -1.2
PDGFRB-203ENST00000517660 MRPS12O15235 138 aaKnown RBP7.54□□□□□ -1.2
PDGFRB-203ENST00000517660 COX7A2P2O60397 106 aa7.54□□□□□ -1.2
PDGFRB-203ENST00000517660 CST7O76096 145 aa7.54□□□□□ -1.2
PDGFRB-203ENST00000517660 C1QBP02746 253 aa7.54□□□□□ -1.2
PDGFRB-203ENST00000517660 CXCL2P19875 107 aa7.54□□□□□ -1.2
PDGFRB-203ENST00000517660 CAMLGP49069 296 aa7.54□□□□□ -1.2
PDGFRB-203ENST00000517660 B2MP61769 119 aa7.54□□□□□ -1.2
PDGFRB-203ENST00000517660 FAM222AQ5U5X8 452 aa7.54□□□□□ -1.2
PDGFRB-203ENST00000517660 Q6ZRG5 221 aa7.54□□□□□ -1.2
PDGFRB-203ENST00000517660 OR8A1Q8NGG7 326 aa7.54□□□□□ -1.2
PDGFRB-203ENST00000517660 TMEM37Q8WXS4 190 aa7.54□□□□□ -1.2
PDGFRB-203ENST00000517660 FAM210BQ96KR6 192 aa7.54□□□□□ -1.2
PDGFRB-203ENST00000517660 MGST2Q99735 147 aa7.54□□□□□ -1.2
PDGFRB-203ENST00000517660 NIPSNAP3BQ9BS92 247 aa7.54□□□□□ -1.2
PDGFRB-203ENST00000517660 NDUFAF3Q9BU61 184 aa7.54□□□□□ -1.2
PDGFRB-203ENST00000517660 DNAJC4Q9NNZ3 241 aa7.54□□□□□ -1.2
PDGFRB-203ENST00000517660 PPP1R14DQ9NXH3 145 aa7.54□□□□□ -1.2
PDGFRB-203ENST00000517660 WDR83OSQ9Y284 106 aa7.54□□□□□ -1.2
PDGFRB-203ENST00000517660 M0R2Z0 102 aa7.53□□□□□ -1.2
PDGFRB-203ENST00000517660 CRXO43186 299 aaPredicted RBP7.53□□□□□ -1.2
PDGFRB-203ENST00000517660 INSP01308 110 aa7.53□□□□□ -1.2
PDGFRB-203ENST00000517660 S100A11P31949 105 aa7.53□□□□□ -1.2
PDGFRB-203ENST00000517660 SULT1A1P50225 295 aa7.53□□□□□ -1.2
PDGFRB-203ENST00000517660 S100A10P60903 97 aa7.53□□□□□ -1.2
PDGFRB-203ENST00000517660 RHOBP62745 196 aa7.53□□□□□ -1.2
PDGFRB-203ENST00000517660 HIST1H1AQ02539 215 aaPredicted RBP7.53□□□□□ -1.2
PDGFRB-203ENST00000517660 SPINK13Q1W4C9 94 aa7.53□□□□□ -1.2
PDGFRB-203ENST00000517660 C10orf113Q5VZT2 155 aa7.53□□□□□ -1.2
PDGFRB-203ENST00000517660 LCN15Q6UWW0 184 aa7.53□□□□□ -1.2
PDGFRB-203ENST00000517660 BPIFA4PQ86YQ2 179 aa7.53□□□□□ -1.2
PDGFRB-203ENST00000517660 TMEM252Q8N6L7 170 aa7.53□□□□□ -1.2
PDGFRB-203ENST00000517660 RPUSD4Q96CM3 377 aaKnown RBP7.53□□□□□ -1.2
PDGFRB-203ENST00000517660 LYRM2Q9NU23 88 aaPredicted RBP7.53□□□□□ -1.2
PDGFRB-203ENST00000517660 UQCC1Q9NVA1 299 aa7.53□□□□□ -1.2
PDGFRB-203ENST00000517660 YTHDF2Q9Y5A9 579 aaKnown RBP7.53□□□□□ -1.2
PDGFRB-203ENST00000517660 SMLR1H3BR10 107 aa7.52□□□□□ -1.21
PDGFRB-203ENST00000517660 P0DMU3 169 aa7.52□□□□□ -1.21
PDGFRB-203ENST00000517660 FAM231AP0DMU4 169 aa7.52□□□□□ -1.21
PDGFRB-203ENST00000517660 FAM231CP0DMU5 169 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms