RNA–Protein interactions for RNA: ENST00000517488.1

PDGFRB-202, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 822 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-202ENST00000517488 DNAJC4Q9NNZ3 241 aa10.17□□□□□ -0.78
PDGFRB-202ENST00000517488 A8MTW9 85 aa10.16□□□□□ -0.78
PDGFRB-202ENST00000517488 E5RGE8 158 aa10.16□□□□□ -0.78
PDGFRB-202ENST00000517488 SSNA1O43805 119 aa10.16□□□□□ -0.78
PDGFRB-202ENST00000517488 CXCL3P19876 107 aa10.16□□□□□ -0.78
PDGFRB-202ENST00000517488 FGF7P21781 194 aa10.16□□□□□ -0.78
PDGFRB-202ENST00000517488 CNN1P51911 297 aaKnown RBP10.16□□□□□ -0.78
PDGFRB-202ENST00000517488 B2MP61769 119 aa10.16□□□□□ -0.78
PDGFRB-202ENST00000517488 CYCSP99999 105 aaKnown RBP10.16□□□□□ -0.78
PDGFRB-202ENST00000517488 OPCMLQ14982 345 aa10.16□□□□□ -0.78
PDGFRB-202ENST00000517488 ATP6V1FQ16864 119 aa10.16□□□□□ -0.78
PDGFRB-202ENST00000517488 AMTNQ6UX39 209 aa10.16□□□□□ -0.78
PDGFRB-202ENST00000517488 Q6ZRG5 221 aa10.16□□□□□ -0.78
PDGFRB-202ENST00000517488 ZNF738Q8NE65 137 aa10.16□□□□□ -0.78
PDGFRB-202ENST00000517488 KLK5Q9Y337 293 aaPredicted RBP10.16□□□□□ -0.78
PDGFRB-202ENST00000517488 IGHV3OR16-12A0A075B7B8 117 aa10.15□□□□□ -0.78
PDGFRB-202ENST00000517488 TRAV5A0A0B4J249 113 aa10.15□□□□□ -0.78
PDGFRB-202ENST00000517488 ZNF705FA8MVS1 300 aaPredicted RBP10.15□□□□□ -0.78
PDGFRB-202ENST00000517488 H3BTX0 84 aa10.15□□□□□ -0.78
PDGFRB-202ENST00000517488 RPL29P47914 159 aaKnown RBP10.15□□□□□ -0.78
PDGFRB-202ENST00000517488 OR5C1Q8NGR4 320 aa10.15□□□□□ -0.78
PDGFRB-202ENST00000517488 LRRC20Q8TCA0 184 aa10.15□□□□□ -0.78
PDGFRB-202ENST00000517488 CHAC2Q8WUX2 184 aa10.15□□□□□ -0.78
PDGFRB-202ENST00000517488 PPP1R1CQ8WVI7 109 aa10.15□□□□□ -0.78
PDGFRB-202ENST00000517488 RNF126Q9BV68 326 aa10.15□□□□□ -0.78
PDGFRB-202ENST00000517488 SLC25A31Q9H0C2 315 aa10.15□□□□□ -0.78
PDGFRB-202ENST00000517488 HRH4Q9H3N8 390 aa10.15□□□□□ -0.78
PDGFRB-202ENST00000517488 SLC39A9Q9NUM3 307 aa10.15□□□□□ -0.78
PDGFRB-202ENST00000517488 CELA1Q9UNI1 258 aa10.15□□□□□ -0.78
PDGFRB-202ENST00000517488 RNF24Q9Y225 148 aa10.15□□□□□ -0.78
PDGFRB-202ENST00000517488 EPPK1P58107 5090 aaKnown RBP10.15□□□□□ -0.78
PDGFRB-202ENST00000517488 DUSP14O95147 198 aaKnown RBP10.14□□□□□ -0.79
PDGFRB-202ENST00000517488 CLINT1Q14677 625 aa10.14□□□□□ -0.79
PDGFRB-202ENST00000517488 PSG3Q16557 428 aa10.14□□□□□ -0.79
PDGFRB-202ENST00000517488 BPIFA4PQ86YQ2 179 aa10.14□□□□□ -0.79
PDGFRB-202ENST00000517488 C1orf158Q8N1D5 194 aa10.14□□□□□ -0.79
PDGFRB-202ENST00000517488 OR11H7Q8NGC8 314 aa10.14□□□□□ -0.79
PDGFRB-202ENST00000517488 OR1L4Q8NGR5 311 aa10.14□□□□□ -0.79
PDGFRB-202ENST00000517488 THAP6Q8TBB0 222 aa10.14□□□□□ -0.79
PDGFRB-202ENST00000517488 LINC00476Q8WZB0 136 aa10.14□□□□□ -0.79
PDGFRB-202ENST00000517488 NEU1Q99519 415 aa10.14□□□□□ -0.79
PDGFRB-202ENST00000517488 ZNF331Q9NQX6 463 aaPredicted RBP10.14□□□□□ -0.79
PDGFRB-202ENST00000517488 PXMP4Q9Y6I8 212 aa10.14□□□□□ -0.79
PDGFRB-202ENST00000517488 DNAH6Q9C0G6 4158 aa10.14□□□□□ -0.79
PDGFRB-202ENST00000517488 H3BQ15 152 aa10.13□□□□□ -0.79
PDGFRB-202ENST00000517488 SLC17A3O00476 420 aa10.13□□□□□ -0.79
PDGFRB-202ENST00000517488 IGLC2P0DOY2 106 aa10.13□□□□□ -0.79
PDGFRB-202ENST00000517488 GCSAMLQ5JQS6 135 aa10.13□□□□□ -0.79
PDGFRB-202ENST00000517488 LCN15Q6UWW0 184 aa10.13□□□□□ -0.79
PDGFRB-202ENST00000517488 ZNF767PQ75MW2 155 aa10.13□□□□□ -0.79
PDGFRB-202ENST00000517488 OR8A1Q8NGG7 326 aa10.13□□□□□ -0.79
PDGFRB-202ENST00000517488 PFDN5Q99471 154 aa10.13□□□□□ -0.79
PDGFRB-202ENST00000517488 NPCDR1Q9BY65 106 aa10.13□□□□□ -0.79
PDGFRB-202ENST00000517488 GOLT1BQ9Y3E0 138 aa10.13□□□□□ -0.79
PDGFRB-202ENST00000517488 M0R2Z0 102 aa10.12□□□□□ -0.79
PDGFRB-202ENST00000517488 CRXO43186 299 aaPredicted RBP10.12□□□□□ -0.79
PDGFRB-202ENST00000517488 MPDU1O75352 247 aa10.12□□□□□ -0.79
PDGFRB-202ENST00000517488 MPC2O95563 127 aa10.12□□□□□ -0.79
PDGFRB-202ENST00000517488 LY6G6CO95867 125 aa10.12□□□□□ -0.79
PDGFRB-202ENST00000517488 CXCL2P19875 107 aa10.12□□□□□ -0.79
PDGFRB-202ENST00000517488 EMP1P54849 157 aa10.12□□□□□ -0.79
PDGFRB-202ENST00000517488 HIST1H1AQ02539 215 aaPredicted RBP10.12□□□□□ -0.79
PDGFRB-202ENST00000517488 SPINK13Q1W4C9 94 aa10.12□□□□□ -0.79
PDGFRB-202ENST00000517488 C12orf74Q32Q52 190 aa10.12□□□□□ -0.79
PDGFRB-202ENST00000517488 Q6ZTC4 211 aa10.12□□□□□ -0.79
PDGFRB-202ENST00000517488 RPUSD4Q96CM3 377 aaKnown RBP10.12□□□□□ -0.79
PDGFRB-202ENST00000517488 IGF2BP2-AS1Q96M15 143 aa10.12□□□□□ -0.79
PDGFRB-202ENST00000517488 ALG5Q9Y673 324 aa10.12□□□□□ -0.79
PDGFRB-202ENST00000517488 DNAH10Q8IVF4 4471 aa10.11□□□□□ -0.79
PDGFRB-202ENST00000517488 SMIM9A6NGZ8 99 aa10.11□□□□□ -0.79
PDGFRB-202ENST00000517488 SAT2Q96F10 170 aaPredicted RBP10.11□□□□□ -0.79
PDGFRB-202ENST00000517488 SLC50A1Q9BRV3 221 aa10.11□□□□□ -0.79
PDGFRB-202ENST00000517488 ZNF586Q9NXT0 402 aa10.11□□□□□ -0.79
PDGFRB-202ENST00000517488 C11orf94C9JXX5 98 aa10.1□□□□□ -0.79
PDGFRB-202ENST00000517488 PRAC2D3DTV9 90 aa10.1□□□□□ -0.79
PDGFRB-202ENST00000517488 PTTG1O95997 202 aa10.1□□□□□ -0.79
PDGFRB-202ENST00000517488 PRM2P04554 102 aa10.1□□□□□ -0.79
PDGFRB-202ENST00000517488 RHOBP62745 196 aa10.1□□□□□ -0.79
PDGFRB-202ENST00000517488 BAP18Q8IXM2 172 aa10.1□□□□□ -0.79
PDGFRB-202ENST00000517488 C2CD4CQ8TF44 421 aa10.1□□□□□ -0.79
PDGFRB-202ENST00000517488 WDR61Q9GZS3 305 aaKnown RBP10.1□□□□□ -0.79
PDGFRB-202ENST00000517488 MBD2Q9UBB5 411 aa10.1□□□□□ -0.79
PDGFRB-202ENST00000517488 RFNGQ9Y644 331 aa10.1□□□□□ -0.79
PDGFRB-202ENST00000517488 TRAV12-2A0A075B6T6 113 aa10.09□□□□□ -0.79
PDGFRB-202ENST00000517488 IGLL5B9A064 214 aa10.09□□□□□ -0.79
PDGFRB-202ENST00000517488 BOLA2-SMG1P6H3BVE0 249 aa10.09□□□□□ -0.79
PDGFRB-202ENST00000517488 HBE1P02100 147 aa10.09□□□□□ -0.79
PDGFRB-202ENST00000517488 AMBPP02760 352 aa10.09□□□□□ -0.79
PDGFRB-202ENST00000517488 ATP5SQ99766 215 aa10.09□□□□□ -0.79
PDGFRB-202ENST00000517488 TMEM208Q9BTX3 173 aa10.09□□□□□ -0.79
PDGFRB-202ENST00000517488 HSPB11Q9Y547 144 aa10.09□□□□□ -0.79
PDGFRB-202ENST00000517488 BIRC6Q9NR09 4857 aa10.09□□□□□ -0.79
PDGFRB-202ENST00000517488 TRAV10A0A0B4J240 114 aa10.08□□□□□ -0.8
PDGFRB-202ENST00000517488 LOC102723971A0A1B0GUV8 181 aa10.08□□□□□ -0.8
PDGFRB-202ENST00000517488 TMEM189A5PLL7 270 aa10.08□□□□□ -0.8
PDGFRB-202ENST00000517488 INSP01308 110 aa10.08□□□□□ -0.8
PDGFRB-202ENST00000517488 SPART-AS1P0CW21 52 aa10.08□□□□□ -0.8
PDGFRB-202ENST00000517488 PET100P0DJ07 73 aa10.08□□□□□ -0.8
PDGFRB-202ENST00000517488 PYYP10082 97 aa10.08□□□□□ -0.8
PDGFRB-202ENST00000517488 RPL12P30050 165 aaKnown RBP10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms