RNA–Protein interactions for RNA: ENST00000515546.1

HMGCLL1-209, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 4

Gene HMGCLL1, Length 569 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-209ENST00000515546 A0A087X0K7 114 aa10.72□□□□□ -0.69
HMGCLL1-209ENST00000515546 TRAV8-2A0A0B4J237 113 aa10.72□□□□□ -0.69
HMGCLL1-209ENST00000515546 RPL7P18124 248 aaKnown RBP10.72□□□□□ -0.69
HMGCLL1-209ENST00000515546 NKX2-5P52952 324 aaPredicted RBP10.72□□□□□ -0.69
HMGCLL1-209ENST00000515546 BAXQ07812 192 aa10.72□□□□□ -0.69
HMGCLL1-209ENST00000515546 ZNF705AQ6ZN79 300 aaPredicted RBP10.72□□□□□ -0.69
HMGCLL1-209ENST00000515546 S100A7AQ86SG5 101 aa10.72□□□□□ -0.69
HMGCLL1-209ENST00000515546 OR5C1Q8NGR4 320 aa10.72□□□□□ -0.69
HMGCLL1-209ENST00000515546 LINC00476Q8WZB0 136 aa10.72□□□□□ -0.69
HMGCLL1-209ENST00000515546 SMIM3Q9BZL3 60 aa10.72□□□□□ -0.69
HMGCLL1-209ENST00000515546 ARL6Q9H0F7 186 aa10.72□□□□□ -0.69
HMGCLL1-209ENST00000515546 ARV1Q9H2C2 271 aa10.72□□□□□ -0.69
HMGCLL1-209ENST00000515546 WFDC1Q9HC57 220 aa10.72□□□□□ -0.69
HMGCLL1-209ENST00000515546 RPRMQ9NS64 109 aa10.72□□□□□ -0.69
HMGCLL1-209ENST00000515546 XCL2Q9UBD3 114 aa10.72□□□□□ -0.69
HMGCLL1-209ENST00000515546 WDR83OSQ9Y284 106 aa10.72□□□□□ -0.69
HMGCLL1-209ENST00000515546 KLK5Q9Y337 293 aaPredicted RBP10.72□□□□□ -0.69
HMGCLL1-209ENST00000515546 ZNF705FA8MVS1 300 aaPredicted RBP10.71□□□□□ -0.69
HMGCLL1-209ENST00000515546 F6UB75 175 aa10.71□□□□□ -0.69
HMGCLL1-209ENST00000515546 MRPS12O15235 138 aaKnown RBP10.71□□□□□ -0.69
HMGCLL1-209ENST00000515546 OR5G3P0C626 314 aa10.71□□□□□ -0.69
HMGCLL1-209ENST00000515546 ZNF705DP0CH99 300 aaPredicted RBP10.71□□□□□ -0.69
HMGCLL1-209ENST00000515546 ZNF705BP0CI00 300 aaPredicted RBP10.71□□□□□ -0.69
HMGCLL1-209ENST00000515546 EBLN2Q6P2I7 272 aa10.71□□□□□ -0.69
HMGCLL1-209ENST00000515546 INO80EQ8NBZ0 244 aaPredicted RBP10.71□□□□□ -0.69
HMGCLL1-209ENST00000515546 HYLS1Q96M11 299 aa10.71□□□□□ -0.69
HMGCLL1-209ENST00000515546 UQCC1Q9NVA1 299 aa10.71□□□□□ -0.69
HMGCLL1-209ENST00000515546 ELOA3CA0A087WX78 387 aaPredicted RBP10.7□□□□□ -0.7
HMGCLL1-209ENST00000515546 IGKV3-20P01619 116 aa10.7□□□□□ -0.7
HMGCLL1-209ENST00000515546 PRR20EP86478 221 aa10.7□□□□□ -0.7
HMGCLL1-209ENST00000515546 PRR20CP86479 221 aa10.7□□□□□ -0.7
HMGCLL1-209ENST00000515546 PRR20DP86480 221 aa10.7□□□□□ -0.7
HMGCLL1-209ENST00000515546 PRR20BP86481 221 aa10.7□□□□□ -0.7
HMGCLL1-209ENST00000515546 PRR20AP86496 221 aa10.7□□□□□ -0.7
HMGCLL1-209ENST00000515546 ZNF345Q14585 488 aa10.7□□□□□ -0.7
HMGCLL1-209ENST00000515546 CLINT1Q14677 625 aa10.7□□□□□ -0.7
HMGCLL1-209ENST00000515546 LGALSLQ3ZCW2 172 aaPredicted RBP10.7□□□□□ -0.7
HMGCLL1-209ENST00000515546 FAM78BQ5VT40 261 aa10.7□□□□□ -0.7
HMGCLL1-209ENST00000515546 C9orf62Q8N4C0 152 aa10.7□□□□□ -0.7
HMGCLL1-209ENST00000515546 KCNRGQ8N5I3 272 aa10.7□□□□□ -0.7
HMGCLL1-209ENST00000515546 NEU1Q99519 415 aa10.7□□□□□ -0.7
HMGCLL1-209ENST00000515546 RNF24Q9Y225 148 aa10.7□□□□□ -0.7
HMGCLL1-209ENST00000515546 EPPK1P58107 5090 aaKnown RBP10.69□□□□□ -0.7
HMGCLL1-209ENST00000515546 S100A11P31949 105 aa10.69□□□□□ -0.7
HMGCLL1-209ENST00000515546 CAMLGP49069 296 aa10.69□□□□□ -0.7
HMGCLL1-209ENST00000515546 HBG1P69891 147 aa10.69□□□□□ -0.7
HMGCLL1-209ENST00000515546 HBG2P69892 147 aa10.69□□□□□ -0.7
HMGCLL1-209ENST00000515546 PSG9Q00887 426 aa10.69□□□□□ -0.7
HMGCLL1-209ENST00000515546 AMTNQ6UX39 209 aa10.69□□□□□ -0.7
HMGCLL1-209ENST00000515546 RNF182Q8N6D2 247 aa10.69□□□□□ -0.7
HMGCLL1-209ENST00000515546 OR4B1Q8NGF8 309 aa10.69□□□□□ -0.7
HMGCLL1-209ENST00000515546 TMEM37Q8WXS4 190 aa10.69□□□□□ -0.7
HMGCLL1-209ENST00000515546 SLC35B3Q9H1N7 401 aa10.69□□□□□ -0.7
HMGCLL1-209ENST00000515546 UBE2L5PA0A1B0GUS4 154 aa10.68□□□□□ -0.7
HMGCLL1-209ENST00000515546 COX7A2P2O60397 106 aa10.68□□□□□ -0.7
HMGCLL1-209ENST00000515546 RAB31Q13636 194 aa10.68□□□□□ -0.7
HMGCLL1-209ENST00000515546 LINC00305Q7Z4B0 112 aa10.68□□□□□ -0.7
HMGCLL1-209ENST00000515546 ATP5SQ99766 215 aa10.68□□□□□ -0.7
HMGCLL1-209ENST00000515546 VPS13DQ5THJ4 4388 aa10.67□□□□□ -0.7
HMGCLL1-209ENST00000515546 CNN1P51911 297 aaKnown RBP10.67□□□□□ -0.7
HMGCLL1-209ENST00000515546 FXYD7P58549 80 aa10.67□□□□□ -0.7
HMGCLL1-209ENST00000515546 OPCMLQ14982 345 aa10.67□□□□□ -0.7
HMGCLL1-209ENST00000515546 ATP6V1FQ16864 119 aa10.67□□□□□ -0.7
HMGCLL1-209ENST00000515546 MORN5Q5VZ52 161 aa10.67□□□□□ -0.7
HMGCLL1-209ENST00000515546 IGFL4Q6B9Z1 124 aa10.67□□□□□ -0.7
HMGCLL1-209ENST00000515546 TMUB2Q71RG4 321 aa10.67□□□□□ -0.7
HMGCLL1-209ENST00000515546 CYTL1Q9NRR1 136 aa10.67□□□□□ -0.7
HMGCLL1-209ENST00000515546 KMT2AQ03164 3969 aa10.67□□□□□ -0.7
HMGCLL1-209ENST00000515546 A0A0D9SG52 128 aa10.66□□□□□ -0.7
HMGCLL1-209ENST00000515546 SMIM9A6NGZ8 99 aa10.66□□□□□ -0.7
HMGCLL1-209ENST00000515546 C11orf94C9JXX5 98 aa10.66□□□□□ -0.7
HMGCLL1-209ENST00000515546 BCL2L11O43521 198 aa10.66□□□□□ -0.7
HMGCLL1-209ENST00000515546 DUSP14O95147 198 aaKnown RBP10.66□□□□□ -0.7
HMGCLL1-209ENST00000515546 IGLC2P0DOY2 106 aa10.66□□□□□ -0.7
HMGCLL1-209ENST00000515546 HLA-DMBP28068 263 aa10.66□□□□□ -0.7
HMGCLL1-209ENST00000515546 RPL29P47914 159 aaKnown RBP10.66□□□□□ -0.7
HMGCLL1-209ENST00000515546 C10orf113Q5VZT2 155 aa10.66□□□□□ -0.7
HMGCLL1-209ENST00000515546 MIC13Q5XKP0 118 aa10.66□□□□□ -0.7
HMGCLL1-209ENST00000515546 CELA1Q9UNI1 258 aa10.66□□□□□ -0.7
HMGCLL1-209ENST00000515546 PSG3Q16557 428 aa10.65□□□□□ -0.7
HMGCLL1-209ENST00000515546 RPL7L1Q6DKI1 246 aaKnown RBP10.65□□□□□ -0.7
HMGCLL1-209ENST00000515546 LCN15Q6UWW0 184 aa10.65□□□□□ -0.7
HMGCLL1-209ENST00000515546 Q6ZTC4 211 aa10.65□□□□□ -0.7
HMGCLL1-209ENST00000515546 BPIFA4PQ86YQ2 179 aa10.65□□□□□ -0.7
HMGCLL1-209ENST00000515546 C1orf158Q8N1D5 194 aa10.65□□□□□ -0.7
HMGCLL1-209ENST00000515546 ZNF738Q8NE65 137 aa10.65□□□□□ -0.7
HMGCLL1-209ENST00000515546 C2CD4CQ8TF44 421 aa10.65□□□□□ -0.7
HMGCLL1-209ENST00000515546 ARPC5LQ9BPX5 153 aa10.65□□□□□ -0.7
HMGCLL1-209ENST00000515546 WDR61Q9GZS3 305 aaKnown RBP10.65□□□□□ -0.7
HMGCLL1-209ENST00000515546 DNAJC4Q9NNZ3 241 aa10.65□□□□□ -0.7
HMGCLL1-209ENST00000515546 ZNF331Q9NQX6 463 aaPredicted RBP10.65□□□□□ -0.7
HMGCLL1-209ENST00000515546 SLC39A9Q9NUM3 307 aa10.65□□□□□ -0.7
HMGCLL1-209ENST00000515546 BOLA1Q9Y3E2 137 aa10.65□□□□□ -0.7
HMGCLL1-209ENST00000515546 TMEM189A5PLL7 270 aa10.64□□□□□ -0.71
HMGCLL1-209ENST00000515546 MPDU1O75352 247 aa10.64□□□□□ -0.71
HMGCLL1-209ENST00000515546 AMBPP02760 352 aa10.64□□□□□ -0.71
HMGCLL1-209ENST00000515546 FGF7P21781 194 aa10.64□□□□□ -0.71
HMGCLL1-209ENST00000515546 TCTAP57738 103 aa10.64□□□□□ -0.71
HMGCLL1-209ENST00000515546 Q6ZRG5 221 aa10.64□□□□□ -0.71
HMGCLL1-209ENST00000515546 OR8A1Q8NGG7 326 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms