RNA–Protein interactions for RNA: ENST00000511767.3

PDLIM5-216, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-216ENST00000511767 RNF182Q8N6D2 247 aa11.66□□□□□ -0.54
PDLIM5-216ENST00000511767 OR5C1Q8NGR4 320 aa11.66□□□□□ -0.54
PDLIM5-216ENST00000511767 SLC35B3Q9H1N7 401 aa11.66□□□□□ -0.54
PDLIM5-216ENST00000511767 SLC39A9Q9NUM3 307 aa11.66□□□□□ -0.54
PDLIM5-216ENST00000511767 UBE2L5PA0A1B0GUS4 154 aa11.65□□□□□ -0.54
PDLIM5-216ENST00000511767 MPDU1O75352 247 aa11.65□□□□□ -0.54
PDLIM5-216ENST00000511767 HLA-DMBP28068 263 aa11.65□□□□□ -0.54
PDLIM5-216ENST00000511767 PSG3Q16557 428 aa11.65□□□□□ -0.54
PDLIM5-216ENST00000511767 ZNF705AQ6ZN79 300 aaPredicted RBP11.65□□□□□ -0.54
PDLIM5-216ENST00000511767 OR1L4Q8NGR5 311 aa11.65□□□□□ -0.54
PDLIM5-216ENST00000511767 PHLDA1Q8WV24 401 aaPredicted RBP11.65□□□□□ -0.54
PDLIM5-216ENST00000511767 H3BQ15 152 aa11.64□□□□□ -0.55
PDLIM5-216ENST00000511767 SNRPCP09234 159 aaKnown RBP11.64□□□□□ -0.55
PDLIM5-216ENST00000511767 ZNF705DP0CH99 300 aaPredicted RBP11.64□□□□□ -0.55
PDLIM5-216ENST00000511767 ZNF705BP0CI00 300 aaPredicted RBP11.64□□□□□ -0.55
PDLIM5-216ENST00000511767 FGF7P21781 194 aa11.64□□□□□ -0.55
PDLIM5-216ENST00000511767 B2MP61769 119 aa11.64□□□□□ -0.55
PDLIM5-216ENST00000511767 BAXQ07812 192 aa11.64□□□□□ -0.55
PDLIM5-216ENST00000511767 BPIFA4PQ86YQ2 179 aa11.64□□□□□ -0.55
PDLIM5-216ENST00000511767 SAT2Q96F10 170 aaPredicted RBP11.64□□□□□ -0.55
PDLIM5-216ENST00000511767 NEU1Q99519 415 aa11.64□□□□□ -0.55
PDLIM5-216ENST00000511767 ALG5Q9Y673 324 aa11.64□□□□□ -0.55
PDLIM5-216ENST00000511767 PXMP4Q9Y6I8 212 aa11.64□□□□□ -0.55
PDLIM5-216ENST00000511767 ZNF705FA8MVS1 300 aaPredicted RBP11.63□□□□□ -0.55
PDLIM5-216ENST00000511767 DUSP14O95147 198 aaKnown RBP11.63□□□□□ -0.55
PDLIM5-216ENST00000511767 PTTG1O95997 202 aa11.63□□□□□ -0.55
PDLIM5-216ENST00000511767 IGLC2P0DOY2 106 aa11.63□□□□□ -0.55
PDLIM5-216ENST00000511767 CNN1P51911 297 aaKnown RBP11.63□□□□□ -0.55
PDLIM5-216ENST00000511767 C1orf158Q8N1D5 194 aa11.63□□□□□ -0.55
PDLIM5-216ENST00000511767 LRRC20Q8TCA0 184 aa11.63□□□□□ -0.55
PDLIM5-216ENST00000511767 NPCDR1Q9BY65 106 aa11.63□□□□□ -0.55
PDLIM5-216ENST00000511767 HRH4Q9H3N8 390 aa11.63□□□□□ -0.55
PDLIM5-216ENST00000511767 ZNF331Q9NQX6 463 aaPredicted RBP11.63□□□□□ -0.55
PDLIM5-216ENST00000511767 NUPR2A6NF83 97 aa11.62□□□□□ -0.55
PDLIM5-216ENST00000511767 SMIM9A6NGZ8 99 aa11.62□□□□□ -0.55
PDLIM5-216ENST00000511767 OR8A1Q8NGG7 326 aa11.62□□□□□ -0.55
PDLIM5-216ENST00000511767 THAP6Q8TBB0 222 aa11.62□□□□□ -0.55
PDLIM5-216ENST00000511767 PFDN5Q99471 154 aa11.62□□□□□ -0.55
PDLIM5-216ENST00000511767 MFFQ9GZY8 342 aa11.62□□□□□ -0.55
PDLIM5-216ENST00000511767 HYDINQ4G0P3 5121 aa11.61□□□□□ -0.55
PDLIM5-216ENST00000511767 H3BTX0 84 aa11.61□□□□□ -0.55
PDLIM5-216ENST00000511767 CXCL2P19875 107 aa11.61□□□□□ -0.55
PDLIM5-216ENST00000511767 CLINT1Q14677 625 aa11.61□□□□□ -0.55
PDLIM5-216ENST00000511767 GCSAMLQ5JQS6 135 aa11.61□□□□□ -0.55
PDLIM5-216ENST00000511767 LCN15Q6UWW0 184 aa11.61□□□□□ -0.55
PDLIM5-216ENST00000511767 ZNF738Q8NE65 137 aa11.61□□□□□ -0.55
PDLIM5-216ENST00000511767 OR11H7Q8NGC8 314 aa11.61□□□□□ -0.55
PDLIM5-216ENST00000511767 WDR61Q9GZS3 305 aaKnown RBP11.61□□□□□ -0.55
PDLIM5-216ENST00000511767 KLK5Q9Y337 293 aaPredicted RBP11.61□□□□□ -0.55
PDLIM5-216ENST00000511767 CRXO43186 299 aaPredicted RBP11.6□□□□□ -0.55
PDLIM5-216ENST00000511767 RPL12P30050 165 aaKnown RBP11.6□□□□□ -0.55
PDLIM5-216ENST00000511767 RPUSD4Q96CM3 377 aaKnown RBP11.6□□□□□ -0.55
PDLIM5-216ENST00000511767 IGF2BP2-AS1Q96M15 143 aa11.6□□□□□ -0.55
PDLIM5-216ENST00000511767 ZNF586Q9NXT0 402 aa11.6□□□□□ -0.55
PDLIM5-216ENST00000511767 HSPB11Q9Y547 144 aa11.6□□□□□ -0.55
PDLIM5-216ENST00000511767 PRAC2D3DTV9 90 aa11.59□□□□□ -0.55
PDLIM5-216ENST00000511767 SLC17A3O00476 420 aa11.59□□□□□ -0.55
PDLIM5-216ENST00000511767 JTBO76095 146 aa11.59□□□□□ -0.55
PDLIM5-216ENST00000511767 PRB4P10163 310 aaPredicted RBP11.59□□□□□ -0.55
PDLIM5-216ENST00000511767 FCN2Q15485 313 aa11.59□□□□□ -0.55
PDLIM5-216ENST00000511767 C12orf74Q32Q52 190 aa11.59□□□□□ -0.55
PDLIM5-216ENST00000511767 SLC50A1Q9BRV3 221 aa11.59□□□□□ -0.55
PDLIM5-216ENST00000511767 TMEM14CQ9P0S9 112 aa11.59□□□□□ -0.55
PDLIM5-216ENST00000511767 IGHV3OR16-12A0A075B7B8 117 aa11.58□□□□□ -0.56
PDLIM5-216ENST00000511767 GUK1Q16774 197 aa11.58□□□□□ -0.56
PDLIM5-216ENST00000511767 FAM167A-AS1Q96KT0 104 aa11.58□□□□□ -0.56
PDLIM5-216ENST00000511767 MED28Q9H204 178 aa11.58□□□□□ -0.56
PDLIM5-216ENST00000511767 WFDC1Q9HC57 220 aa11.58□□□□□ -0.56
PDLIM5-216ENST00000511767 MBD2Q9UBB5 411 aa11.58□□□□□ -0.56
PDLIM5-216ENST00000511767 GOLT1BQ9Y3E0 138 aa11.58□□□□□ -0.56
PDLIM5-216ENST00000511767 AMBPP02760 352 aa11.57□□□□□ -0.56
PDLIM5-216ENST00000511767 PET100P0DJ07 73 aa11.57□□□□□ -0.56
PDLIM5-216ENST00000511767 HIST1H1EP10412 219 aaKnown RBP11.57□□□□□ -0.56
PDLIM5-216ENST00000511767 HIST1H1AQ02539 215 aaPredicted RBP11.57□□□□□ -0.56
PDLIM5-216ENST00000511767 SPINK13Q1W4C9 94 aa11.57□□□□□ -0.56
PDLIM5-216ENST00000511767 ATP5SQ99766 215 aa11.57□□□□□ -0.56
PDLIM5-216ENST00000511767 CELA1Q9UNI1 258 aa11.57□□□□□ -0.56
PDLIM5-216ENST00000511767 TRBV19A0A075B6N1 114 aa11.56□□□□□ -0.56
PDLIM5-216ENST00000511767 M0R2Z0 102 aa11.56□□□□□ -0.56
PDLIM5-216ENST00000511767 ZNF253O75346 499 aa11.56□□□□□ -0.56
PDLIM5-216ENST00000511767 NDUFB4O95168 129 aa11.56□□□□□ -0.56
PDLIM5-216ENST00000511767 PRM2P04554 102 aa11.56□□□□□ -0.56
PDLIM5-216ENST00000511767 RHOBP62745 196 aa11.56□□□□□ -0.56
PDLIM5-216ENST00000511767 MIR17HGQ75NE6 70 aa11.56□□□□□ -0.56
PDLIM5-216ENST00000511767 SMIM3Q9BZL3 60 aa11.56□□□□□ -0.56
PDLIM5-216ENST00000511767 RFNGQ9Y644 331 aa11.56□□□□□ -0.56
PDLIM5-216ENST00000511767 ALMS1Q8TCU4 4167 aa11.56□□□□□ -0.56
PDLIM5-216ENST00000511767 TMEM189A5PLL7 270 aa11.55□□□□□ -0.56
PDLIM5-216ENST00000511767 C11orf94C9JXX5 98 aa11.55□□□□□ -0.56
PDLIM5-216ENST00000511767 PYYP10082 97 aa11.55□□□□□ -0.56
PDLIM5-216ENST00000511767 Q5BKY6 102 aa11.55□□□□□ -0.56
PDLIM5-216ENST00000511767 Q6ZTC4 211 aa11.55□□□□□ -0.56
PDLIM5-216ENST00000511767 SCGB1C1Q8TD33 95 aa11.55□□□□□ -0.56
PDLIM5-216ENST00000511767 C2CD4CQ8TF44 421 aa11.55□□□□□ -0.56
PDLIM5-216ENST00000511767 SLC25A2Q9BXI2 301 aa11.55□□□□□ -0.56
PDLIM5-216ENST00000511767 TRAV12-2A0A075B6T6 113 aa11.54□□□□□ -0.56
PDLIM5-216ENST00000511767 C17orf112F2Z3M2 114 aa11.54□□□□□ -0.56
PDLIM5-216ENST00000511767 BOLA2-SMG1P6H3BVE0 249 aa11.54□□□□□ -0.56
PDLIM5-216ENST00000511767 IFNA5P01569 189 aa11.54□□□□□ -0.56
PDLIM5-216ENST00000511767 HBE1P02100 147 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms