RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 MPDU1O75352 247 aa10.16□□□□□ -0.78
DDX41-212ENST00000511040 NUTF2P61970 127 aaKnown RBP10.16□□□□□ -0.78
DDX41-212ENST00000511040 TMEM41BQ5BJD5 291 aa10.16□□□□□ -0.78
DDX41-212ENST00000511040 CSNK1G2-AS1Q8NCQ2 148 aa10.16□□□□□ -0.78
DDX41-212ENST00000511040 CHAC2Q8WUX2 184 aa10.16□□□□□ -0.78
DDX41-212ENST00000511040 PFDN5Q99471 154 aa10.16□□□□□ -0.78
DDX41-212ENST00000511040 ATP5SQ99766 215 aa10.16□□□□□ -0.78
DDX41-212ENST00000511040 WDR61Q9GZS3 305 aaKnown RBP10.16□□□□□ -0.78
DDX41-212ENST00000511040 SLC35B3Q9H1N7 401 aa10.16□□□□□ -0.78
DDX41-212ENST00000511040 RNF24Q9Y225 148 aa10.16□□□□□ -0.78
DDX41-212ENST00000511040 STARD9Q9P2P6 4700 aa10.16□□□□□ -0.78
DDX41-212ENST00000511040 H3BQ15 152 aa10.15□□□□□ -0.78
DDX41-212ENST00000511040 Q5BKY6 102 aa10.15□□□□□ -0.78
DDX41-212ENST00000511040 SPATA31B1PQ5VZV4 182 aa10.15□□□□□ -0.78
DDX41-212ENST00000511040 BPIFA4PQ86YQ2 179 aa10.15□□□□□ -0.78
DDX41-212ENST00000511040 ZNF709Q8N972 641 aa10.15□□□□□ -0.78
DDX41-212ENST00000511040 WFDC1Q9HC57 220 aa10.15□□□□□ -0.78
DDX41-212ENST00000511040 hCG_2014768A0A024R1R8 64 aa10.14□□□□□ -0.79
DDX41-212ENST00000511040 CXorf65A6NEN9 183 aa10.14□□□□□ -0.79
DDX41-212ENST00000511040 SLC17A3O00476 420 aa10.14□□□□□ -0.79
DDX41-212ENST00000511040 IGLC2P0DOY2 106 aa10.14□□□□□ -0.79
DDX41-212ENST00000511040 PSG9Q00887 426 aa10.14□□□□□ -0.79
DDX41-212ENST00000511040 MFFQ9GZY8 342 aa10.14□□□□□ -0.79
DDX41-212ENST00000511040 RFNGQ9Y644 331 aa10.14□□□□□ -0.79
DDX41-212ENST00000511040 X6R8D5 127 aa10.14□□□□□ -0.79
DDX41-212ENST00000511040 IGHV3OR16-12A0A075B7B8 117 aa10.13□□□□□ -0.79
DDX41-212ENST00000511040 IGHV4-28A0A0C4DH34 117 aa10.13□□□□□ -0.79
DDX41-212ENST00000511040 RBMY1A1P0DJD3 496 aaKnown RBP10.13□□□□□ -0.79
DDX41-212ENST00000511040 RBMY1CP0DJD4 496 aa10.13□□□□□ -0.79
DDX41-212ENST00000511040 CNN1P51911 297 aaKnown RBP10.13□□□□□ -0.79
DDX41-212ENST00000511040 HIST1H1AQ02539 215 aaPredicted RBP10.13□□□□□ -0.79
DDX41-212ENST00000511040 RBMY1FQ15415 496 aaKnown RBP10.13□□□□□ -0.79
DDX41-212ENST00000511040 PSG3Q16557 428 aa10.13□□□□□ -0.79
DDX41-212ENST00000511040 LCN15Q6UWW0 184 aa10.13□□□□□ -0.79
DDX41-212ENST00000511040 MIR17HGQ75NE6 70 aa10.13□□□□□ -0.79
DDX41-212ENST00000511040 Q8NAQ8 132 aa10.13□□□□□ -0.79
DDX41-212ENST00000511040 SCGB1C1Q8TD33 95 aa10.13□□□□□ -0.79
DDX41-212ENST00000511040 C1QTNF4Q9BXJ3 329 aa10.13□□□□□ -0.79
DDX41-212ENST00000511040 ZNF331Q9NQX6 463 aaPredicted RBP10.13□□□□□ -0.79
DDX41-212ENST00000511040 ZNF705FA8MVS1 300 aaPredicted RBP10.12□□□□□ -0.79
DDX41-212ENST00000511040 ZNF705EA8MWA4 302 aaPredicted RBP10.12□□□□□ -0.79
DDX41-212ENST00000511040 IFNA5P01569 189 aa10.12□□□□□ -0.79
DDX41-212ENST00000511040 GIPP09681 153 aaPredicted RBP10.12□□□□□ -0.79
DDX41-212ENST00000511040 PYYP10082 97 aa10.12□□□□□ -0.79
DDX41-212ENST00000511040 NANOS2P60321 138 aaKnown RBP10.12□□□□□ -0.79
DDX41-212ENST00000511040 AMTNQ6UX39 209 aa10.12□□□□□ -0.79
DDX41-212ENST00000511040 RPUSD4Q96CM3 377 aaKnown RBP10.12□□□□□ -0.79
DDX41-212ENST00000511040 CLUHP3Q96NS8 147 aa10.12□□□□□ -0.79
DDX41-212ENST00000511040 C11orf68Q9H3H3 251 aaKnown RBP10.12□□□□□ -0.79
DDX41-212ENST00000511040 HRH4Q9H3N8 390 aa10.12□□□□□ -0.79
DDX41-212ENST00000511040 KCNIP2Q9NS61 270 aa10.12□□□□□ -0.79
DDX41-212ENST00000511040 ZNF586Q9NXT0 402 aa10.12□□□□□ -0.79
DDX41-212ENST00000511040 C17orf112F2Z3M2 114 aa10.11□□□□□ -0.79
DDX41-212ENST00000511040 DUSP14O95147 198 aaKnown RBP10.11□□□□□ -0.79
DDX41-212ENST00000511040 CXCL2P19875 107 aa10.11□□□□□ -0.79
DDX41-212ENST00000511040 SPINK13Q1W4C9 94 aa10.11□□□□□ -0.79
DDX41-212ENST00000511040 FFAR4Q5NUL3 377 aa10.11□□□□□ -0.79
DDX41-212ENST00000511040 OR8A1Q8NGG7 326 aa10.11□□□□□ -0.79
DDX41-212ENST00000511040 SLC50A1Q9BRV3 221 aa10.11□□□□□ -0.79
DDX41-212ENST00000511040 SLC25A2Q9BXI2 301 aa10.11□□□□□ -0.79
DDX41-212ENST00000511040 A8MTW9 85 aa10.1□□□□□ -0.79
DDX41-212ENST00000511040 PRAC2D3DTV9 90 aa10.1□□□□□ -0.79
DDX41-212ENST00000511040 M0R2Z0 102 aa10.1□□□□□ -0.79
DDX41-212ENST00000511040 MIFP14174 115 aa10.1□□□□□ -0.79
DDX41-212ENST00000511040 RHOBP62745 196 aa10.1□□□□□ -0.79
DDX41-212ENST00000511040 C11orf45Q8TAV5 145 aa10.1□□□□□ -0.79
DDX41-212ENST00000511040 BLNKQ8WV28 456 aa10.1□□□□□ -0.79
DDX41-212ENST00000511040 SAT2Q96F10 170 aaPredicted RBP10.1□□□□□ -0.79
DDX41-212ENST00000511040 FAM167A-AS1Q96KT0 104 aa10.1□□□□□ -0.79
DDX41-212ENST00000511040 TMEM14CQ9P0S9 112 aa10.1□□□□□ -0.79
DDX41-212ENST00000511040 CSMD3Q7Z407 3707 aa10.1□□□□□ -0.79
DDX41-212ENST00000511040 FXYD6-FXYD2A0A087WZ82 144 aa10.09□□□□□ -0.79
DDX41-212ENST00000511040 EIF3GO75821 320 aaKnown RBP eCLIP10.09□□□□□ -0.79
DDX41-212ENST00000511040 GUK1Q16774 197 aa10.09□□□□□ -0.79
DDX41-212ENST00000511040 ZNF705AQ6ZN79 300 aaPredicted RBP10.09□□□□□ -0.79
DDX41-212ENST00000511040 PPP1R14DQ9NXH3 145 aa10.09□□□□□ -0.79
DDX41-212ENST00000511040 TIMM9Q9Y5J7 89 aa10.09□□□□□ -0.79
DDX41-212ENST00000511040 TRBV19A0A075B6N1 114 aa10.08□□□□□ -0.8
DDX41-212ENST00000511040 TRAV12-2A0A075B6T6 113 aa10.08□□□□□ -0.8
DDX41-212ENST00000511040 BOLA2-SMG1P6H3BVE0 249 aa10.08□□□□□ -0.8
DDX41-212ENST00000511040 NDUFB4O95168 129 aa10.08□□□□□ -0.8
DDX41-212ENST00000511040 OR10J4P0C629 311 aa10.08□□□□□ -0.8
DDX41-212ENST00000511040 HIST1H1EP10412 219 aaKnown RBP10.08□□□□□ -0.8
DDX41-212ENST00000511040 EMP1P54849 157 aa10.08□□□□□ -0.8
DDX41-212ENST00000511040 BAP18Q8IXM2 172 aa10.08□□□□□ -0.8
DDX41-212ENST00000511040 C1orf158Q8N1D5 194 aa10.08□□□□□ -0.8
DDX41-212ENST00000511040 OR2T35Q8NGX2 323 aa10.08□□□□□ -0.8
DDX41-212ENST00000511040 PHLDA1Q8WV24 401 aaPredicted RBP10.08□□□□□ -0.8
DDX41-212ENST00000511040 AQP10Q96PS8 301 aa10.08□□□□□ -0.8
DDX41-212ENST00000511040 FUT9Q9Y231 359 aa10.08□□□□□ -0.8
DDX41-212ENST00000511040 GOLT1BQ9Y3E0 138 aa10.08□□□□□ -0.8
DDX41-212ENST00000511040 DYNC2H1Q8NCM8 4307 aaKnown RBP10.07□□□□□ -0.8
DDX41-212ENST00000511040 CD300CQ08708 224 aa10.07□□□□□ -0.8
DDX41-212ENST00000511040 CEMP1Q6PRD7 247 aaPredicted RBP10.07□□□□□ -0.8
DDX41-212ENST00000511040 EXOC3-AS1Q8N2X6 119 aa10.07□□□□□ -0.8
DDX41-212ENST00000511040 ASB13Q8WXK3 278 aa10.07□□□□□ -0.8
DDX41-212ENST00000511040 IGF2BP2-AS1Q96M15 143 aa10.07□□□□□ -0.8
DDX41-212ENST00000511040 PAXXQ9BUH6 204 aa10.07□□□□□ -0.8
DDX41-212ENST00000511040 MRPL32Q9BYC8 188 aaKnown RBP10.07□□□□□ -0.8
DDX41-212ENST00000511040 PARD6GQ9BYG4 376 aaPredicted RBP10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms