RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 CXCL3P19876 107 aa6.49□□□□□ -1.37
PDLIM5-209ENST00000506632 CNN1P51911 297 aaKnown RBP6.49□□□□□ -1.37
PDLIM5-209ENST00000506632 CT83Q5H943 113 aa6.49□□□□□ -1.37
PDLIM5-209ENST00000506632 IGFL4Q6B9Z1 124 aa6.49□□□□□ -1.37
PDLIM5-209ENST00000506632 RNF182Q8N6D2 247 aa6.49□□□□□ -1.37
PDLIM5-209ENST00000506632 OR11H7Q8NGC8 314 aa6.49□□□□□ -1.37
PDLIM5-209ENST00000506632 S100ZQ8WXG8 99 aa6.49□□□□□ -1.37
PDLIM5-209ENST00000506632 IGF2BP2-AS1Q96M15 143 aa6.49□□□□□ -1.37
PDLIM5-209ENST00000506632 MGST2Q99735 147 aa6.49□□□□□ -1.37
PDLIM5-209ENST00000506632 RNF126Q9BV68 326 aa6.49□□□□□ -1.37
PDLIM5-209ENST00000506632 ARL6Q9H0F7 186 aa6.49□□□□□ -1.37
PDLIM5-209ENST00000506632 LSM5Q9Y4Y9 91 aaKnown RBP6.49□□□□□ -1.37
PDLIM5-209ENST00000506632 RFNGQ9Y644 331 aa6.49□□□□□ -1.37
PDLIM5-209ENST00000506632 DNAH6Q9C0G6 4158 aa6.48□□□□□ -1.37
PDLIM5-209ENST00000506632 IGHV4-4A0A075B6R2 117 aa6.48□□□□□ -1.37
PDLIM5-209ENST00000506632 IGHV3OR16-12A0A075B7B8 117 aa6.48□□□□□ -1.37
PDLIM5-209ENST00000506632 FAM24AA6NFZ4 105 aa6.48□□□□□ -1.37
PDLIM5-209ENST00000506632 FAM25EA8MYX2 175 aa6.48□□□□□ -1.37
PDLIM5-209ENST00000506632 L7N2F9 121 aa6.48□□□□□ -1.37
PDLIM5-209ENST00000506632 GOSR2O14653 212 aa6.48□□□□□ -1.37
PDLIM5-209ENST00000506632 CRXO43186 299 aaPredicted RBP6.48□□□□□ -1.37
PDLIM5-209ENST00000506632 DUSP14O95147 198 aaKnown RBP6.48□□□□□ -1.37
PDLIM5-209ENST00000506632 SPART-AS1P0CW21 52 aa6.48□□□□□ -1.37
PDLIM5-209ENST00000506632 CXCL2P19875 107 aa6.48□□□□□ -1.37
PDLIM5-209ENST00000506632 VAMP2P63027 116 aa6.48□□□□□ -1.37
PDLIM5-209ENST00000506632 RAB32Q13637 225 aa6.48□□□□□ -1.37
PDLIM5-209ENST00000506632 VWC2Q2TAL6 325 aa6.48□□□□□ -1.37
PDLIM5-209ENST00000506632 MORN5Q5VZ52 161 aa6.48□□□□□ -1.37
PDLIM5-209ENST00000506632 MZT2BQ6NZ67 158 aa6.48□□□□□ -1.37
PDLIM5-209ENST00000506632 ZNF767PQ75MW2 155 aa6.48□□□□□ -1.37
PDLIM5-209ENST00000506632 S100A7AQ86SG5 101 aa6.48□□□□□ -1.37
PDLIM5-209ENST00000506632 TMEM37Q8WXS4 190 aa6.48□□□□□ -1.37
PDLIM5-209ENST00000506632 LYRM2Q9NU23 88 aaPredicted RBP6.48□□□□□ -1.37
PDLIM5-209ENST00000506632 DKK2Q9UBU2 259 aa6.48□□□□□ -1.37
PDLIM5-209ENST00000506632 RNF24Q9Y225 148 aa6.48□□□□□ -1.37
PDLIM5-209ENST00000506632 WDR83OSQ9Y284 106 aa6.48□□□□□ -1.37
PDLIM5-209ENST00000506632 GOLT1BQ9Y3E0 138 aa6.48□□□□□ -1.37
PDLIM5-209ENST00000506632 DNAH10Q8IVF4 4471 aa6.47□□□□□ -1.37
PDLIM5-209ENST00000506632 DEFB131BA0A096LNP1 70 aa6.47□□□□□ -1.37
PDLIM5-209ENST00000506632 TEX48A0A1B0GUV7 120 aa6.47□□□□□ -1.37
PDLIM5-209ENST00000506632 IGSF23A1L1A6 192 aa6.47□□□□□ -1.37
PDLIM5-209ENST00000506632 M0R2Z0 102 aa6.47□□□□□ -1.37
PDLIM5-209ENST00000506632 UPK1BO75841 260 aa6.47□□□□□ -1.37
PDLIM5-209ENST00000506632 CST7O76096 145 aa6.47□□□□□ -1.37
PDLIM5-209ENST00000506632 HBE1P02100 147 aa6.47□□□□□ -1.37
PDLIM5-209ENST00000506632 CAMLGP49069 296 aa6.47□□□□□ -1.37
PDLIM5-209ENST00000506632 SULT1A1P50225 295 aa6.47□□□□□ -1.37
PDLIM5-209ENST00000506632 CAV2P51636 162 aa6.47□□□□□ -1.37
PDLIM5-209ENST00000506632 IFITM3Q01628 133 aa6.47□□□□□ -1.37
PDLIM5-209ENST00000506632 FGL1Q08830 312 aa6.47□□□□□ -1.37
PDLIM5-209ENST00000506632 OXA1LQ15070 435 aa6.47□□□□□ -1.37
PDLIM5-209ENST00000506632 PSG3Q16557 428 aa6.47□□□□□ -1.37
PDLIM5-209ENST00000506632 SPINK13Q1W4C9 94 aa6.47□□□□□ -1.37
PDLIM5-209ENST00000506632 LINC00305Q7Z4B0 112 aa6.47□□□□□ -1.37
PDLIM5-209ENST00000506632 TMEM252Q8N6L7 170 aa6.47□□□□□ -1.37
PDLIM5-209ENST00000506632 ZNF738Q8NE65 137 aa6.47□□□□□ -1.37
PDLIM5-209ENST00000506632 OR8A1Q8NGG7 326 aa6.47□□□□□ -1.37
PDLIM5-209ENST00000506632 ZNF331Q9NQX6 463 aaPredicted RBP6.47□□□□□ -1.37
PDLIM5-209ENST00000506632 UQCC1Q9NVA1 299 aa6.47□□□□□ -1.37
PDLIM5-209ENST00000506632 LOC102723971A0A1B0GUV8 181 aa6.46□□□□□ -1.38
PDLIM5-209ENST00000506632 COX7A2P2O60397 106 aa6.46□□□□□ -1.38
PDLIM5-209ENST00000506632 PVALBP20472 110 aaPredicted RBP6.46□□□□□ -1.38
PDLIM5-209ENST00000506632 RPL29P47914 159 aaKnown RBP6.46□□□□□ -1.38
PDLIM5-209ENST00000506632 BCAP31P51572 246 aa6.46□□□□□ -1.38
PDLIM5-209ENST00000506632 S100A10P60903 97 aa6.46□□□□□ -1.38
PDLIM5-209ENST00000506632 RAB31Q13636 194 aa6.46□□□□□ -1.38
PDLIM5-209ENST00000506632 OPCMLQ14982 345 aa6.46□□□□□ -1.38
PDLIM5-209ENST00000506632 RRN3P1Q2M238 152 aa6.46□□□□□ -1.38
PDLIM5-209ENST00000506632 FAM222AQ5U5X8 452 aa6.46□□□□□ -1.38
PDLIM5-209ENST00000506632 MIC13Q5XKP0 118 aa6.46□□□□□ -1.38
PDLIM5-209ENST00000506632 LCN15Q6UWW0 184 aa6.46□□□□□ -1.38
PDLIM5-209ENST00000506632 NRARPQ7Z6K4 114 aa6.46□□□□□ -1.38
PDLIM5-209ENST00000506632 BPIFA4PQ86YQ2 179 aa6.46□□□□□ -1.38
PDLIM5-209ENST00000506632 SLC50A1Q9BRV3 221 aa6.46□□□□□ -1.38
PDLIM5-209ENST00000506632 PTTG2Q9NZH5 202 aa6.46□□□□□ -1.38
PDLIM5-209ENST00000506632 YTHDF2Q9Y5A9 579 aaKnown RBP6.46□□□□□ -1.38
PDLIM5-209ENST00000506632 FRAS1Q86XX4 4008 aa6.46□□□□□ -1.38
PDLIM5-209ENST00000506632 BOLA2-SMG1P6H3BVE0 249 aa6.45□□□□□ -1.38
PDLIM5-209ENST00000506632 SLC17A3O00476 420 aa6.45□□□□□ -1.38
PDLIM5-209ENST00000506632 INSP01308 110 aa6.45□□□□□ -1.38
PDLIM5-209ENST00000506632 IGLC2P0DOY2 106 aa6.45□□□□□ -1.38
PDLIM5-209ENST00000506632 TSPOP30536 169 aa6.45□□□□□ -1.38
PDLIM5-209ENST00000506632 S100A11P31949 105 aa6.45□□□□□ -1.38
PDLIM5-209ENST00000506632 EMP1P54849 157 aa6.45□□□□□ -1.38
PDLIM5-209ENST00000506632 HIST1H1AQ02539 215 aaPredicted RBP6.45□□□□□ -1.38
PDLIM5-209ENST00000506632 C10orf113Q5VZT2 155 aa6.45□□□□□ -1.38
PDLIM5-209ENST00000506632 BAP18Q8IXM2 172 aa6.45□□□□□ -1.38
PDLIM5-209ENST00000506632 ENKURQ8TC29 256 aa6.45□□□□□ -1.38
PDLIM5-209ENST00000506632 RPUSD4Q96CM3 377 aaKnown RBP6.45□□□□□ -1.38
PDLIM5-209ENST00000506632 SAT2Q96F10 170 aaPredicted RBP6.45□□□□□ -1.38
PDLIM5-209ENST00000506632 FAM210BQ96KR6 192 aa6.45□□□□□ -1.38
PDLIM5-209ENST00000506632 NIPSNAP3BQ9BS92 247 aa6.45□□□□□ -1.38
PDLIM5-209ENST00000506632 DNAJC4Q9NNZ3 241 aa6.45□□□□□ -1.38
PDLIM5-209ENST00000506632 UBE2L5PA0A1B0GUS4 154 aa6.44□□□□□ -1.38
PDLIM5-209ENST00000506632 PLAC8L1A1L4L8 177 aa6.44□□□□□ -1.38
PDLIM5-209ENST00000506632 ZNF705GA8MUZ8 300 aaPredicted RBP6.44□□□□□ -1.38
PDLIM5-209ENST00000506632 H3BQ15 152 aa6.44□□□□□ -1.38
PDLIM5-209ENST00000506632 PRAF2O60831 178 aa6.44□□□□□ -1.38
PDLIM5-209ENST00000506632 PRM2P04554 102 aa6.44□□□□□ -1.38
PDLIM5-209ENST00000506632 B2MP61769 119 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms