RNA–Protein interactions for RNA: ENST00000496043.5

PTPRF-214, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 415 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-214ENST00000496043 LSM5Q9Y4Y9 91 aaKnown RBP9.1□□□□□ -0.95
PTPRF-214ENST00000496043 CXCL3P19876 107 aa9.09□□□□□ -0.95
PTPRF-214ENST00000496043 PVALBP20472 110 aaPredicted RBP9.09□□□□□ -0.95
PTPRF-214ENST00000496043 RHOBP62745 196 aa9.09□□□□□ -0.95
PTPRF-214ENST00000496043 SPINK13Q1W4C9 94 aa9.09□□□□□ -0.95
PTPRF-214ENST00000496043 LINC00305Q7Z4B0 112 aa9.09□□□□□ -0.95
PTPRF-214ENST00000496043 NUDT15Q9NV35 164 aa9.09□□□□□ -0.95
PTPRF-214ENST00000496043 YTHDF2Q9Y5A9 579 aaKnown RBP9.09□□□□□ -0.95
PTPRF-214ENST00000496043 FAM240BA0A1B0GVZ2 78 aa9.08□□□□□ -0.96
PTPRF-214ENST00000496043 FAM24AA6NFZ4 105 aa9.08□□□□□ -0.96
PTPRF-214ENST00000496043 M0R2Z0 102 aa9.08□□□□□ -0.96
PTPRF-214ENST00000496043 CRXO43186 299 aaPredicted RBP9.08□□□□□ -0.96
PTPRF-214ENST00000496043 COX7A2P2O60397 106 aa9.08□□□□□ -0.96
PTPRF-214ENST00000496043 INSP01308 110 aa9.08□□□□□ -0.96
PTPRF-214ENST00000496043 CAV2P51636 162 aa9.08□□□□□ -0.96
PTPRF-214ENST00000496043 HIST1H1AQ02539 215 aaPredicted RBP9.08□□□□□ -0.96
PTPRF-214ENST00000496043 MZT2BQ6NZ67 158 aa9.08□□□□□ -0.96
PTPRF-214ENST00000496043 Q6ZRG5 221 aa9.08□□□□□ -0.96
PTPRF-214ENST00000496043 LINC00299Q6ZSB3 139 aa9.08□□□□□ -0.96
PTPRF-214ENST00000496043 BPIFA4PQ86YQ2 179 aa9.08□□□□□ -0.96
PTPRF-214ENST00000496043 POM121L12Q8N7R1 296 aa9.08□□□□□ -0.96
PTPRF-214ENST00000496043 OR8A1Q8NGG7 326 aa9.08□□□□□ -0.96
PTPRF-214ENST00000496043 DNAJC4Q9NNZ3 241 aa9.08□□□□□ -0.96
PTPRF-214ENST00000496043 PTTG2Q9NZH5 202 aa9.08□□□□□ -0.96
PTPRF-214ENST00000496043 VPS13DQ5THJ4 4388 aa9.08□□□□□ -0.96
PTPRF-214ENST00000496043 ZNF705GA8MUZ8 300 aaPredicted RBP9.07□□□□□ -0.96
PTPRF-214ENST00000496043 MRPS12O15235 138 aaKnown RBP9.07□□□□□ -0.96
PTPRF-214ENST00000496043 CST7O76096 145 aa9.07□□□□□ -0.96
PTPRF-214ENST00000496043 HTN3P15516 51 aa9.07□□□□□ -0.96
PTPRF-214ENST00000496043 CXCL2P19875 107 aa9.07□□□□□ -0.96
PTPRF-214ENST00000496043 CAMLGP49069 296 aa9.07□□□□□ -0.96
PTPRF-214ENST00000496043 DAD1P61803 113 aa9.07□□□□□ -0.96
PTPRF-214ENST00000496043 C10orf113Q5VZT2 155 aa9.07□□□□□ -0.96
PTPRF-214ENST00000496043 S100ZQ8WXG8 99 aa9.07□□□□□ -0.96
PTPRF-214ENST00000496043 RPUSD4Q96CM3 377 aaKnown RBP9.07□□□□□ -0.96
PTPRF-214ENST00000496043 LINC01587Q99440 93 aa9.07□□□□□ -0.96
PTPRF-214ENST00000496043 MGST2Q99735 147 aa9.07□□□□□ -0.96
PTPRF-214ENST00000496043 TRAV12-2A0A075B6T6 113 aa9.06□□□□□ -0.96
PTPRF-214ENST00000496043 BOLA2-SMG1P6H3BVE0 249 aa9.06□□□□□ -0.96
PTPRF-214ENST00000496043 S100A11P31949 105 aa9.06□□□□□ -0.96
PTPRF-214ENST00000496043 LCN15Q6UWW0 184 aa9.06□□□□□ -0.96
PTPRF-214ENST00000496043 NRARPQ7Z6K4 114 aa9.06□□□□□ -0.96
PTPRF-214ENST00000496043 TMEM37Q8WXS4 190 aa9.06□□□□□ -0.96
PTPRF-214ENST00000496043 SLC50A1Q9BRV3 221 aa9.06□□□□□ -0.96
PTPRF-214ENST00000496043 C11orf1Q9H5F2 150 aa9.06□□□□□ -0.96
PTPRF-214ENST00000496043 ZNF331Q9NQX6 463 aaPredicted RBP9.06□□□□□ -0.96
PTPRF-214ENST00000496043 UQCC1Q9NVA1 299 aa9.06□□□□□ -0.96
PTPRF-214ENST00000496043 LYRM9A8MSI8 78 aa9.05□□□□□ -0.96
PTPRF-214ENST00000496043 PRM2P04554 102 aa9.05□□□□□ -0.96
PTPRF-214ENST00000496043 SNRPCP09234 159 aaKnown RBP9.05□□□□□ -0.96
PTPRF-214ENST00000496043 TSPOP30536 169 aa9.05□□□□□ -0.96
PTPRF-214ENST00000496043 SULT1A1P50225 295 aa9.05□□□□□ -0.96
PTPRF-214ENST00000496043 S100A10P60903 97 aa9.05□□□□□ -0.96
PTPRF-214ENST00000496043 IL15RAQ13261 267 aa9.05□□□□□ -0.96
PTPRF-214ENST00000496043 ATP6V1FQ16864 119 aa9.05□□□□□ -0.96
PTPRF-214ENST00000496043 BAP18Q8IXM2 172 aa9.05□□□□□ -0.96
PTPRF-214ENST00000496043 TMEM256Q8N2U0 113 aa9.05□□□□□ -0.96
PTPRF-214ENST00000496043 OR1L4Q8NGR5 311 aa9.05□□□□□ -0.96
PTPRF-214ENST00000496043 WDR83OSQ9Y284 106 aa9.05□□□□□ -0.96
PTPRF-214ENST00000496043 DNAH10Q8IVF4 4471 aa9.05□□□□□ -0.96
PTPRF-214ENST00000496043 AZU1P20160 251 aa9.04□□□□□ -0.96
PTPRF-214ENST00000496043 RPL29P47914 159 aaKnown RBP9.04□□□□□ -0.96
PTPRF-214ENST00000496043 TAS2R60P59551 318 aa9.04□□□□□ -0.96
PTPRF-214ENST00000496043 HBG1P69891 147 aa9.04□□□□□ -0.96
PTPRF-214ENST00000496043 HBG2P69892 147 aa9.04□□□□□ -0.96
PTPRF-214ENST00000496043 RAB32Q13637 225 aa9.04□□□□□ -0.96
PTPRF-214ENST00000496043 OPCMLQ14982 345 aa9.04□□□□□ -0.96
PTPRF-214ENST00000496043 MIC13Q5XKP0 118 aa9.04□□□□□ -0.96
PTPRF-214ENST00000496043 TMEM252Q8N6L7 170 aa9.04□□□□□ -0.96
PTPRF-214ENST00000496043 OR10J6PQ8NGY7 276 aa9.04□□□□□ -0.96
PTPRF-214ENST00000496043 PFDN5Q99471 154 aa9.04□□□□□ -0.96
PTPRF-214ENST00000496043 LYRM2Q9NU23 88 aaPredicted RBP9.04□□□□□ -0.96
PTPRF-214ENST00000496043 PXMP4Q9Y6I8 212 aa9.04□□□□□ -0.96
PTPRF-214ENST00000496043 RLN2P04090 185 aa9.03□□□□□ -0.96
PTPRF-214ENST00000496043 DEFB130BP0DP73 79 aa9.03□□□□□ -0.96
PTPRF-214ENST00000496043 DEFB130AP0DP74 79 aa9.03□□□□□ -0.96
PTPRF-214ENST00000496043 HTN1P15515 57 aa9.03□□□□□ -0.96
PTPRF-214ENST00000496043 CDKN1BP46527 198 aa9.03□□□□□ -0.96
PTPRF-214ENST00000496043 ASAH1Q13510 395 aa9.03□□□□□ -0.96
PTPRF-214ENST00000496043 GUK1Q16774 197 aa9.03□□□□□ -0.96
PTPRF-214ENST00000496043 VWC2Q2TAL6 325 aa9.03□□□□□ -0.96
PTPRF-214ENST00000496043 MORN5Q5VZ52 161 aa9.03□□□□□ -0.96
PTPRF-214ENST00000496043 LINC00336Q6ZUF6 198 aa9.03□□□□□ -0.96
PTPRF-214ENST00000496043 STX12Q86Y82 276 aa9.03□□□□□ -0.96
PTPRF-214ENST00000496043 UBE2DNLQ8IWF7 75 aa9.03□□□□□ -0.96
PTPRF-214ENST00000496043 CHAC2Q8WUX2 184 aa9.03□□□□□ -0.96
PTPRF-214ENST00000496043 SAT2Q96F10 170 aaPredicted RBP9.03□□□□□ -0.96
PTPRF-214ENST00000496043 GPN1Q9HCN4 374 aaPredicted RBP9.03□□□□□ -0.96
PTPRF-214ENST00000496043 SLC39A9Q9NUM3 307 aa9.03□□□□□ -0.96
PTPRF-214ENST00000496043 TRAV5A0A0B4J249 113 aa9.02□□□□□ -0.97
PTPRF-214ENST00000496043 IGSF23A1L1A6 192 aa9.02□□□□□ -0.97
PTPRF-214ENST00000496043 H3BQ15 152 aa9.02□□□□□ -0.97
PTPRF-214ENST00000496043 H3BTX0 84 aa9.02□□□□□ -0.97
PTPRF-214ENST00000496043 IGLC2P0DOY2 106 aa9.02□□□□□ -0.97
PTPRF-214ENST00000496043 PRB4P10163 310 aaPredicted RBP9.02□□□□□ -0.97
PTPRF-214ENST00000496043 BAXQ07812 192 aa9.02□□□□□ -0.97
PTPRF-214ENST00000496043 RNF212Q495C1 297 aa9.02□□□□□ -0.97
PTPRF-214ENST00000496043 TMEM88Q6PEY1 159 aa9.02□□□□□ -0.97
PTPRF-214ENST00000496043 CBY3A6NI87 242 aa9.01□□□□□ -0.97
PTPRF-214ENST00000496043 PRAC2D3DTV9 90 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms