RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 RPP25LQ8N5L8 163 aaKnown RBP17.35■□□□□ 0.37
HLA-C-209ENST00000495835 RNF182Q8N6D2 247 aa17.35■□□□□ 0.37
HLA-C-209ENST00000495835 ZNF738Q8NE65 137 aa17.35■□□□□ 0.37
HLA-C-209ENST00000495835 OR11H7Q8NGC8 314 aa17.35■□□□□ 0.37
HLA-C-209ENST00000495835 GPN1Q9HCN4 374 aaPredicted RBP17.35■□□□□ 0.37
HLA-C-209ENST00000495835 UQCC1Q9NVA1 299 aa17.35■□□□□ 0.37
HLA-C-209ENST00000495835 FAM24AA6NFZ4 105 aa17.34■□□□□ 0.37
HLA-C-209ENST00000495835 COX7A2P2O60397 106 aa17.34■□□□□ 0.37
HLA-C-209ENST00000495835 UPK1BO75841 260 aa17.34■□□□□ 0.37
HLA-C-209ENST00000495835 CST7O76096 145 aa17.34■□□□□ 0.37
HLA-C-209ENST00000495835 HBG1P69891 147 aa17.34■□□□□ 0.37
HLA-C-209ENST00000495835 HBG2P69892 147 aa17.34■□□□□ 0.37
HLA-C-209ENST00000495835 ATP6V1FQ16864 119 aa17.34■□□□□ 0.37
HLA-C-209ENST00000495835 IGFL4Q6B9Z1 124 aa17.34■□□□□ 0.37
HLA-C-209ENST00000495835 CHAC2Q8WUX2 184 aa17.34■□□□□ 0.37
HLA-C-209ENST00000495835 TMEM37Q8WXS4 190 aa17.34■□□□□ 0.37
HLA-C-209ENST00000495835 SLC50A1Q9BRV3 221 aa17.34■□□□□ 0.37
HLA-C-209ENST00000495835 DKK2Q9UBU2 259 aa17.34■□□□□ 0.37
HLA-C-209ENST00000495835 WDR83OSQ9Y284 106 aa17.34■□□□□ 0.37
HLA-C-209ENST00000495835 C10orf113Q5VZT2 155 aa17.33■□□□□ 0.36
HLA-C-209ENST00000495835 NRARPQ7Z6K4 114 aa17.33■□□□□ 0.36
HLA-C-209ENST00000495835 STX12Q86Y82 276 aa17.33■□□□□ 0.36
HLA-C-209ENST00000495835 ENKURQ8TC29 256 aa17.33■□□□□ 0.36
HLA-C-209ENST00000495835 FAM210BQ96KR6 192 aa17.33■□□□□ 0.36
HLA-C-209ENST00000495835 DNAJC4Q9NNZ3 241 aa17.33■□□□□ 0.36
HLA-C-209ENST00000495835 LOC102723971A0A1B0GUV8 181 aa17.32■□□□□ 0.36
HLA-C-209ENST00000495835 INSP01308 110 aa17.32■□□□□ 0.36
HLA-C-209ENST00000495835 S100A10P60903 97 aa17.32■□□□□ 0.36
HLA-C-209ENST00000495835 PRR20EP86478 221 aa17.32■□□□□ 0.36
HLA-C-209ENST00000495835 PRR20CP86479 221 aa17.32■□□□□ 0.36
HLA-C-209ENST00000495835 PRR20DP86480 221 aa17.32■□□□□ 0.36
HLA-C-209ENST00000495835 PRR20BP86481 221 aa17.32■□□□□ 0.36
HLA-C-209ENST00000495835 PRR20AP86496 221 aa17.32■□□□□ 0.36
HLA-C-209ENST00000495835 RAB32Q13637 225 aa17.32■□□□□ 0.36
HLA-C-209ENST00000495835 TMEM252Q8N6L7 170 aa17.32■□□□□ 0.36
HLA-C-209ENST00000495835 OR8A1Q8NGG7 326 aa17.32■□□□□ 0.36
HLA-C-209ENST00000495835 OR1L4Q8NGR5 311 aa17.32■□□□□ 0.36
HLA-C-209ENST00000495835 PFDN5Q99471 154 aa17.32■□□□□ 0.36
HLA-C-209ENST00000495835 TMEM208Q9BTX3 173 aa17.32■□□□□ 0.36
HLA-C-209ENST00000495835 ZNF331Q9NQX6 463 aaPredicted RBP17.32■□□□□ 0.36
HLA-C-209ENST00000495835 PTTG2Q9NZH5 202 aa17.32■□□□□ 0.36
HLA-C-209ENST00000495835 CRXO43186 299 aaPredicted RBP17.31■□□□□ 0.36
HLA-C-209ENST00000495835 RPL29P47914 159 aaKnown RBP17.31■□□□□ 0.36
HLA-C-209ENST00000495835 EMP1P54849 157 aa17.31■□□□□ 0.36
HLA-C-209ENST00000495835 NIPSNAP3BQ9BS92 247 aa17.31■□□□□ 0.36
HLA-C-209ENST00000495835 NDUFAF3Q9BU61 184 aa17.31■□□□□ 0.36
HLA-C-209ENST00000495835 DNAH6Q9C0G6 4158 aa17.31■□□□□ 0.36
HLA-C-209ENST00000495835 FRAS1Q86XX4 4008 aa17.3■□□□□ 0.36
HLA-C-209ENST00000495835 BOLA2-SMG1P6H3BVE0 249 aa17.3■□□□□ 0.36
HLA-C-209ENST00000495835 PRAF2O60831 178 aa17.3■□□□□ 0.36
HLA-C-209ENST00000495835 SPINK13Q1W4C9 94 aa17.3■□□□□ 0.36
HLA-C-209ENST00000495835 FAM222AQ5U5X8 452 aa17.3■□□□□ 0.36
HLA-C-209ENST00000495835 ZNF767PQ75MW2 155 aa17.3■□□□□ 0.36
HLA-C-209ENST00000495835 MPDU1O75352 247 aa17.29■□□□□ 0.36
HLA-C-209ENST00000495835 TSPOP30536 169 aa17.29■□□□□ 0.36
HLA-C-209ENST00000495835 GUK1Q16774 197 aa17.29■□□□□ 0.36
HLA-C-209ENST00000495835 TMEM256Q8N2U0 113 aa17.29■□□□□ 0.36
HLA-C-209ENST00000495835 RPUSD4Q96CM3 377 aaKnown RBP17.29■□□□□ 0.36
HLA-C-209ENST00000495835 PXMP4Q9Y6I8 212 aa17.29■□□□□ 0.36
HLA-C-209ENST00000495835 DNAH10Q8IVF4 4471 aa17.28■□□□□ 0.36
HLA-C-209ENST00000495835 IGSF23A1L1A6 192 aa17.28■□□□□ 0.36
HLA-C-209ENST00000495835 M0R2Z0 102 aa17.28■□□□□ 0.36
HLA-C-209ENST00000495835 RLN2P04090 185 aa17.28■□□□□ 0.36
HLA-C-209ENST00000495835 CYCSP99999 105 aaKnown RBP17.28■□□□□ 0.36
HLA-C-209ENST00000495835 HIST1H1AQ02539 215 aaPredicted RBP17.28■□□□□ 0.36
HLA-C-209ENST00000495835 OPCMLQ14982 345 aa17.28■□□□□ 0.36
HLA-C-209ENST00000495835 NMES1Q9C002 83 aa17.28■□□□□ 0.36
HLA-C-209ENST00000495835 PPP1R14DQ9NXH3 145 aa17.28■□□□□ 0.36
HLA-C-209ENST00000495835 YTHDF2Q9Y5A9 579 aaKnown RBP17.28■□□□□ 0.36
HLA-C-209ENST00000495835 P0DMU3 169 aa17.27■□□□□ 0.36
HLA-C-209ENST00000495835 FAM231AP0DMU4 169 aa17.27■□□□□ 0.36
HLA-C-209ENST00000495835 FAM231CP0DMU5 169 aa17.27■□□□□ 0.36
HLA-C-209ENST00000495835 IGLC2P0DOY2 106 aa17.27■□□□□ 0.36
HLA-C-209ENST00000495835 RHOBP62745 196 aa17.27■□□□□ 0.36
HLA-C-209ENST00000495835 MIC13Q5XKP0 118 aa17.27■□□□□ 0.36
HLA-C-209ENST00000495835 BAXQ07812 192 aa17.26■□□□□ 0.35
HLA-C-209ENST00000495835 SAT2Q96F10 170 aaPredicted RBP17.26■□□□□ 0.35
HLA-C-209ENST00000495835 SLC39A9Q9NUM3 307 aa17.26■□□□□ 0.35
HLA-C-209ENST00000495835 LYRM9A8MSI8 78 aa17.25■□□□□ 0.35
HLA-C-209ENST00000495835 ZNF253O75346 499 aa17.25■□□□□ 0.35
HLA-C-209ENST00000495835 MORN5Q5VZ52 161 aa17.25■□□□□ 0.35
HLA-C-209ENST00000495835 SLC25A31Q9H0C2 315 aa17.25■□□□□ 0.35
HLA-C-209ENST00000495835 UBE2L5PA0A1B0GUS4 154 aa17.24■□□□□ 0.35
HLA-C-209ENST00000495835 E5RGE8 158 aa17.24■□□□□ 0.35
HLA-C-209ENST00000495835 INMT-MINDY4F8WBC2 141 aa17.24■□□□□ 0.35
HLA-C-209ENST00000495835 CDKN1BP46527 198 aa17.24■□□□□ 0.35
HLA-C-209ENST00000495835 IFITM3Q01628 133 aa17.24■□□□□ 0.35
HLA-C-209ENST00000495835 BAP18Q8IXM2 172 aa17.24■□□□□ 0.35
HLA-C-209ENST00000495835 C20orf144Q9BQM9 153 aa17.24■□□□□ 0.35
HLA-C-209ENST00000495835 MARVELD1Q9BSK0 173 aa17.24■□□□□ 0.35
HLA-C-209ENST00000495835 DAD1P61803 113 aa17.23■□□□□ 0.35
HLA-C-209ENST00000495835 H3BQ15 152 aa17.22■□□□□ 0.35
HLA-C-209ENST00000495835 FGF7P21781 194 aa17.22■□□□□ 0.35
HLA-C-209ENST00000495835 TAS2R60P59551 318 aa17.22■□□□□ 0.35
HLA-C-209ENST00000495835 DEFA1P59665 94 aa17.22■□□□□ 0.35
HLA-C-209ENST00000495835 DEFA3P59666 94 aa17.22■□□□□ 0.35
HLA-C-209ENST00000495835 OR10J6PQ8NGY7 276 aa17.22■□□□□ 0.35
HLA-C-209ENST00000495835 TMEM14CQ9P0S9 112 aa17.22■□□□□ 0.35
HLA-C-209ENST00000495835 TRAV12-2A0A075B6T6 113 aa17.21■□□□□ 0.35
HLA-C-209ENST00000495835 ZNF705GA8MUZ8 300 aaPredicted RBP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms