RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 TRAV17A0A0B4J275 112 aa12.12□□□□□ -0.47
SDF4-207ENST00000494748 I3L2K1 104 aa12.12□□□□□ -0.47
SDF4-207ENST00000494748 RPL27AP46776 148 aaKnown RBP12.12□□□□□ -0.47
SDF4-207ENST00000494748 PLA2G2CQ5R387 149 aa12.12□□□□□ -0.47
SDF4-207ENST00000494748 PSG8Q9UQ74 426 aa12.12□□□□□ -0.47
SDF4-207ENST00000494748 A0A0G2JLM5 398 aa12.12□□□□□ -0.47
SDF4-207ENST00000494748 IGKV1-17P01599 117 aa12.12□□□□□ -0.47
SDF4-207ENST00000494748 LGALS7P47929 136 aa12.12□□□□□ -0.47
SDF4-207ENST00000494748 FXYD7P58549 80 aa12.12□□□□□ -0.47
SDF4-207ENST00000494748 HSD52Q0P140 79 aa12.12□□□□□ -0.47
SDF4-207ENST00000494748 C8orf49Q96NF6 230 aa12.12□□□□□ -0.47
SDF4-207ENST00000494748 PSMG3-AS1Q96PY0 264 aa12.12□□□□□ -0.47
SDF4-207ENST00000494748 CSMD1Q96PZ7 3565 aa12.11□□□□□ -0.47
SDF4-207ENST00000494748 TMEM213A2RRL7 107 aa12.11□□□□□ -0.47
SDF4-207ENST00000494748 SIVA1O15304 175 aa12.11□□□□□ -0.47
SDF4-207ENST00000494748 APC2O95996 2303 aa12.11□□□□□ -0.47
SDF4-207ENST00000494748 CD40P25942 277 aa12.11□□□□□ -0.47
SDF4-207ENST00000494748 LOXP28300 417 aaPredicted RBP12.11□□□□□ -0.47
SDF4-207ENST00000494748 CACNG7P62955 275 aa12.11□□□□□ -0.47
SDF4-207ENST00000494748 PSG3Q16557 428 aa12.11□□□□□ -0.47
SDF4-207ENST00000494748 MC5RP33032 325 aa12.11□□□□□ -0.47
SDF4-207ENST00000494748 GTF2H5Q6ZYL4 71 aa12.11□□□□□ -0.47
SDF4-207ENST00000494748 ZNF575Q86XF7 245 aa12.11□□□□□ -0.47
SDF4-207ENST00000494748 PCP2Q8IVA1 136 aa12.11□□□□□ -0.47
SDF4-207ENST00000494748 TMEM133Q9H2Q1 129 aa12.11□□□□□ -0.47
SDF4-207ENST00000494748 SIGLEC9Q9Y336 463 aa12.11□□□□□ -0.47
SDF4-207ENST00000494748 LOC389332A0A1B0GUA5 103 aa12.11□□□□□ -0.47
SDF4-207ENST00000494748 TCTAP57738 103 aa12.11□□□□□ -0.47
SDF4-207ENST00000494748 RBPJQ06330 500 aa12.11□□□□□ -0.47
SDF4-207ENST00000494748 NGBQ9NPG2 151 aa12.11□□□□□ -0.47
SDF4-207ENST00000494748 THYN1Q9P016 225 aa12.11□□□□□ -0.47
SDF4-207ENST00000494748 A6NDN8 102 aa12.1□□□□□ -0.47
SDF4-207ENST00000494748 FAM104BQ5XKR9 115 aa12.1□□□□□ -0.47
SDF4-207ENST00000494748 AMN1Q8IY45 258 aa12.1□□□□□ -0.47
SDF4-207ENST00000494748 NUP37Q8NFH4 326 aa12.1□□□□□ -0.47
SDF4-207ENST00000494748 OR9G4Q8NGQ1 327 aa12.1□□□□□ -0.47
SDF4-207ENST00000494748 H3BRN7 92 aa12.1□□□□□ -0.47
SDF4-207ENST00000494748 PRSS57Q6UWY2 283 aa12.1□□□□□ -0.47
SDF4-207ENST00000494748 PRSS33Q8NF86 280 aa12.1□□□□□ -0.47
SDF4-207ENST00000494748 SHANK2-AS3Q9BTD1 123 aa12.1□□□□□ -0.47
SDF4-207ENST00000494748 TMEM178BH3BS89 294 aa12.1□□□□□ -0.47
SDF4-207ENST00000494748 CEACAM3P40198 252 aa12.1□□□□□ -0.47
SDF4-207ENST00000494748 FAM27E3Q08E93 113 aa12.1□□□□□ -0.47
SDF4-207ENST00000494748 Q6AWC8 147 aa12.1□□□□□ -0.47
SDF4-207ENST00000494748 TACC2O95359 2948 aa12.09□□□□□ -0.47
SDF4-207ENST00000494748 CUL9Q8IWT3 2517 aa12.09□□□□□ -0.47
SDF4-207ENST00000494748 A0A1W2PPM0 123 aa12.09□□□□□ -0.47
SDF4-207ENST00000494748 WI2-2373I1.2A0A1W2PRP0 233 aa12.09□□□□□ -0.47
SDF4-207ENST00000494748 A1L4Q6 167 aa12.09□□□□□ -0.47
SDF4-207ENST00000494748 DLX1P56177 255 aa12.09□□□□□ -0.47
SDF4-207ENST00000494748 TMEM155Q4W5P6 130 aa12.09□□□□□ -0.47
SDF4-207ENST00000494748 ENSAO43768 121 aaKnown RBP12.09□□□□□ -0.47
SDF4-207ENST00000494748 NHLH1Q02575 133 aa12.09□□□□□ -0.47
SDF4-207ENST00000494748 LYZL1Q6UWQ5 148 aa12.09□□□□□ -0.47
SDF4-207ENST00000494748 WFDC8Q8IUA0 241 aa12.09□□□□□ -0.47
SDF4-207ENST00000494748 OR2K2Q8NGT1 345 aa12.09□□□□□ -0.47
SDF4-207ENST00000494748 NPFFR1Q9GZQ6 430 aa12.09□□□□□ -0.47
SDF4-207ENST00000494748 C17orf100A8MU93 164 aa12.08□□□□□ -0.47
SDF4-207ENST00000494748 IGHV1-8P0DP01 117 aa12.08□□□□□ -0.47
SDF4-207ENST00000494748 TMEM11P17152 192 aa12.08□□□□□ -0.47
SDF4-207ENST00000494748 MRPL51Q4U2R6 128 aaKnown RBP12.08□□□□□ -0.47
SDF4-207ENST00000494748 PRELID3AQ96N28 172 aa12.08□□□□□ -0.47
SDF4-207ENST00000494748 ADIPOQQ15848 244 aa12.08□□□□□ -0.48
SDF4-207ENST00000494748 ZNF414Q96IQ9 312 aa12.08□□□□□ -0.48
SDF4-207ENST00000494748 C18orf15Q96N68 181 aa12.08□□□□□ -0.48
SDF4-207ENST00000494748 M0R3E3 92 aa12.08□□□□□ -0.48
SDF4-207ENST00000494748 BCL6BQ8N143 479 aaPredicted RBP12.08□□□□□ -0.48
SDF4-207ENST00000494748 ADGRG4Q8IZF6 3080 aa12.07□□□□□ -0.48
SDF4-207ENST00000494748 K7EM74 188 aa12.07□□□□□ -0.48
SDF4-207ENST00000494748 OR4X2Q8NGF9 303 aa12.07□□□□□ -0.48
SDF4-207ENST00000494748 TPPP3Q9BW30 176 aa12.07□□□□□ -0.48
SDF4-207ENST00000494748 ABCA4P78363 2273 aa12.07□□□□□ -0.48
SDF4-207ENST00000494748 GUCD1Q96NT3 240 aa12.07□□□□□ -0.48
SDF4-207ENST00000494748 DKK2Q9UBU2 259 aa12.07□□□□□ -0.48
SDF4-207ENST00000494748 DMXL1Q9Y485 3027 aa12.07□□□□□ -0.48
SDF4-207ENST00000494748 PPIAL4EA0A075B759 164 aa12.07□□□□□ -0.48
SDF4-207ENST00000494748 NDUFS7O75251 213 aa12.07□□□□□ -0.48
SDF4-207ENST00000494748 HBDP02042 147 aa12.07□□□□□ -0.48
SDF4-207ENST00000494748 PPIAL4FP0DN26 164 aa12.07□□□□□ -0.48
SDF4-207ENST00000494748 LYPD1Q8N2G4 141 aa12.07□□□□□ -0.48
SDF4-207ENST00000494748 RAB37Q96AX2 223 aa12.07□□□□□ -0.48
SDF4-207ENST00000494748 K7EIM0 57 aa12.06□□□□□ -0.48
SDF4-207ENST00000494748 NPYP01303 97 aa12.06□□□□□ -0.48
SDF4-207ENST00000494748 THBDP07204 575 aa12.06□□□□□ -0.48
SDF4-207ENST00000494748 ORMDL3Q8N138 153 aa12.06□□□□□ -0.48
SDF4-207ENST00000494748 TMEM190Q8WZ59 177 aa12.06□□□□□ -0.48
SDF4-207ENST00000494748 PPP1R27Q86WC6 154 aa12.06□□□□□ -0.48
SDF4-207ENST00000494748 RASL11BQ9BPW5 248 aa12.06□□□□□ -0.48
SDF4-207ENST00000494748 LINC01546A6NGU7 62 aa12.06□□□□□ -0.48
SDF4-207ENST00000494748 ZNF491Q8N8L2 437 aa12.06□□□□□ -0.48
SDF4-207ENST00000494748 PIFOQ8TCI5 191 aa12.06□□□□□ -0.48
SDF4-207ENST00000494748 IFI27L1Q96BM0 104 aa12.06□□□□□ -0.48
SDF4-207ENST00000494748 SCNM1Q9BWG6 230 aa12.06□□□□□ -0.48
SDF4-207ENST00000494748 JKAMPQ9P055 326 aa12.06□□□□□ -0.48
SDF4-207ENST00000494748 IGKV2D-26A0A0A0MRZ7 120 aa12.05□□□□□ -0.48
SDF4-207ENST00000494748 SERTM2A0A1B0GWG4 89 aa12.05□□□□□ -0.48
SDF4-207ENST00000494748 SMKR1H3BMG3 65 aa12.05□□□□□ -0.48
SDF4-207ENST00000494748 IGLV1-47P01700 117 aa12.05□□□□□ -0.48
SDF4-207ENST00000494748 PRB3Q04118 309 aaPredicted RBP12.05□□□□□ -0.48
SDF4-207ENST00000494748 COX8CQ7Z4L0 72 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms