RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 UBE2E2Q96LR5 201 aa10.87□□□□□ -0.67
PDZRN3-210ENST00000492909 ELOVL1Q9BW60 279 aa10.87□□□□□ -0.67
PDZRN3-210ENST00000492909 TECRQ9NZ01 308 aaKnown RBP10.87□□□□□ -0.67
PDZRN3-210ENST00000492909 TRBV12-3P01733 135 aa10.86□□□□□ -0.67
PDZRN3-210ENST00000492909 TYMSP04818 313 aa10.86□□□□□ -0.67
PDZRN3-210ENST00000492909 ARL14EPLP0DKL9 152 aa10.86□□□□□ -0.67
PDZRN3-210ENST00000492909 FAM3BP58499 235 aaPredicted RBP10.86□□□□□ -0.67
PDZRN3-210ENST00000492909 PDZD11Q5EBL8 140 aa10.86□□□□□ -0.67
PDZRN3-210ENST00000492909 LINC01551Q86U37 167 aa10.86□□□□□ -0.67
PDZRN3-210ENST00000492909 MRPL27Q9P0M9 148 aaKnown RBP10.86□□□□□ -0.67
PDZRN3-210ENST00000492909 FBN1P35555 2871 aaKnown RBP10.86□□□□□ -0.67
PDZRN3-210ENST00000492909 C8orf88P0DMB2 117 aa10.85□□□□□ -0.67
PDZRN3-210ENST00000492909 USF2Q15853 346 aaPredicted RBP10.85□□□□□ -0.67
PDZRN3-210ENST00000492909 KCNIP4Q6PIL6 250 aa10.85□□□□□ -0.67
PDZRN3-210ENST00000492909 S100A7AQ86SG5 101 aa10.85□□□□□ -0.67
PDZRN3-210ENST00000492909 TMEM183AQ8IXX5 376 aa10.85□□□□□ -0.67
PDZRN3-210ENST00000492909 IMMP2LQ96T52 175 aa10.85□□□□□ -0.67
PDZRN3-210ENST00000492909 PEF1Q9UBV8 284 aaKnown RBP10.85□□□□□ -0.67
PDZRN3-210ENST00000492909 A0A1W2PPQ1 181 aa10.85□□□□□ -0.67
PDZRN3-210ENST00000492909 BMPR1BO00238 502 aa10.85□□□□□ -0.67
PDZRN3-210ENST00000492909 NDUFB4O95168 129 aa10.85□□□□□ -0.67
PDZRN3-210ENST00000492909 FABP4P15090 132 aa10.85□□□□□ -0.67
PDZRN3-210ENST00000492909 COA6Q5JTJ3 125 aaKnown RBP10.85□□□□□ -0.67
PDZRN3-210ENST00000492909 ACTL10Q5JWF8 245 aa10.85□□□□□ -0.67
PDZRN3-210ENST00000492909 MORN5Q5VZ52 161 aa10.85□□□□□ -0.67
PDZRN3-210ENST00000492909 TOMM20LQ6UXN7 152 aa10.85□□□□□ -0.67
PDZRN3-210ENST00000492909 PQLC2Q6ZP29 291 aa10.85□□□□□ -0.67
PDZRN3-210ENST00000492909 WIPF2Q8TF74 440 aaPredicted RBP10.85□□□□□ -0.67
PDZRN3-210ENST00000492909 ZNF414Q96IQ9 312 aa10.85□□□□□ -0.67
PDZRN3-210ENST00000492909 SLC25A39Q9BZJ4 359 aaPredicted RBP10.85□□□□□ -0.67
PDZRN3-210ENST00000492909 ZFAND3Q9H8U3 227 aa10.85□□□□□ -0.67
PDZRN3-210ENST00000492909 OR7C2O60412 319 aa10.84□□□□□ -0.67
PDZRN3-210ENST00000492909 LGALS1P09382 135 aaKnown RBP10.84□□□□□ -0.67
PDZRN3-210ENST00000492909 GCHFRP30047 84 aa10.84□□□□□ -0.67
PDZRN3-210ENST00000492909 BTF3L4Q96K17 158 aa10.84□□□□□ -0.67
PDZRN3-210ENST00000492909 HIST1H2BLQ99880 126 aa10.84□□□□□ -0.67
PDZRN3-210ENST00000492909 TRAV5A0A0B4J249 113 aa10.83□□□□□ -0.68
PDZRN3-210ENST00000492909 TCTEX1D4Q5JR98 221 aa10.83□□□□□ -0.68
PDZRN3-210ENST00000492909 CDPF1Q6NVV7 123 aa10.83□□□□□ -0.68
PDZRN3-210ENST00000492909 FAM167A-AS1Q96KT0 104 aa10.83□□□□□ -0.68
PDZRN3-210ENST00000492909 SLC25A2Q9BXI2 301 aa10.83□□□□□ -0.68
PDZRN3-210ENST00000492909 RABAC1Q9UI14 185 aa10.83□□□□□ -0.68
PDZRN3-210ENST00000492909 RNF114Q9Y508 228 aa10.83□□□□□ -0.68
PDZRN3-210ENST00000492909 IGHV3OR16-8A0A075B7F1 116 aa10.82□□□□□ -0.68
PDZRN3-210ENST00000492909 H3BRN7 92 aa10.82□□□□□ -0.68
PDZRN3-210ENST00000492909 NDUFA4O00483 81 aa10.82□□□□□ -0.68
PDZRN3-210ENST00000492909 S100A7P31151 101 aa10.82□□□□□ -0.68
PDZRN3-210ENST00000492909 KHDC1LQ5JSQ8 128 aa10.82□□□□□ -0.68
PDZRN3-210ENST00000492909 STXBP6Q8NFX7 210 aa10.82□□□□□ -0.68
PDZRN3-210ENST00000492909 PACRGQ96M98 296 aaPredicted RBP10.82□□□□□ -0.68
PDZRN3-210ENST00000492909 SHANK2-AS3Q9BTD1 123 aa10.82□□□□□ -0.68
PDZRN3-210ENST00000492909 DERL1Q9BUN8 251 aa10.82□□□□□ -0.68
PDZRN3-210ENST00000492909 YTHDF2Q9Y5A9 579 aaKnown RBP10.82□□□□□ -0.68
PDZRN3-210ENST00000492909 SCO2A0A1W2PP80 73 aa10.82□□□□□ -0.68
PDZRN3-210ENST00000492909 CLPSL1A2RUU4 121 aa10.82□□□□□ -0.68
PDZRN3-210ENST00000492909 HAX1O00165 279 aa10.82□□□□□ -0.68
PDZRN3-210ENST00000492909 KRTAP24-1Q3LI83 254 aa10.82□□□□□ -0.68
PDZRN3-210ENST00000492909 ZNF503Q96F45 646 aa10.82□□□□□ -0.68
PDZRN3-210ENST00000492909 ATRQ13535 2644 aa10.81□□□□□ -0.68
PDZRN3-210ENST00000492909 XKRY2A2RUG3 117 aa10.81□□□□□ -0.68
PDZRN3-210ENST00000492909 FOXL1Q12952 345 aa10.81□□□□□ -0.68
PDZRN3-210ENST00000492909 LEMD1Q68G75 181 aa10.81□□□□□ -0.68
PDZRN3-210ENST00000492909 C4orf3Q8WVX3 66 aa10.81□□□□□ -0.68
PDZRN3-210ENST00000492909 WFDC12Q8WWY7 111 aa10.81□□□□□ -0.68
PDZRN3-210ENST00000492909 C11orf52Q96A22 123 aa10.81□□□□□ -0.68
PDZRN3-210ENST00000492909 SFRP2Q96HF1 295 aa10.81□□□□□ -0.68
PDZRN3-210ENST00000492909 PAXXQ9BUH6 204 aa10.81□□□□□ -0.68
PDZRN3-210ENST00000492909 TMEM167BQ9NRX6 74 aa10.81□□□□□ -0.68
PDZRN3-210ENST00000492909 RNF24Q9Y225 148 aa10.81□□□□□ -0.68
PDZRN3-210ENST00000492909 ARL2-SNX15V9GYD0 113 aa10.81□□□□□ -0.68
PDZRN3-210ENST00000492909 OR10J4P0C629 311 aa10.8□□□□□ -0.68
PDZRN3-210ENST00000492909 PROK1P58294 105 aa10.8□□□□□ -0.68
PDZRN3-210ENST00000492909 UBE2L3P68036 154 aaKnown RBP10.8□□□□□ -0.68
PDZRN3-210ENST00000492909 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.8□□□□□ -0.68
PDZRN3-210ENST00000492909 METTL26Q96S19 204 aa10.8□□□□□ -0.68
PDZRN3-210ENST00000492909 AURKAIP1Q9NWT8 199 aaPredicted RBP10.8□□□□□ -0.68
PDZRN3-210ENST00000492909 TRBV20OR9-2A0A075B6H5 130 aa10.8□□□□□ -0.68
PDZRN3-210ENST00000492909 PGPEP1LA6NFU8 196 aa10.8□□□□□ -0.68
PDZRN3-210ENST00000492909 AMBPP02760 352 aa10.8□□□□□ -0.68
PDZRN3-210ENST00000492909 PYYP10082 97 aa10.8□□□□□ -0.68
PDZRN3-210ENST00000492909 RPEL1Q2QD12 228 aa10.8□□□□□ -0.68
PDZRN3-210ENST00000492909 FAM106AQ4KMX7 169 aa10.8□□□□□ -0.68
PDZRN3-210ENST00000492909 UNQ9165/PRO28630Q6UXU0 137 aa10.8□□□□□ -0.68
PDZRN3-210ENST00000492909 GPHB5Q86YW7 130 aa10.8□□□□□ -0.68
PDZRN3-210ENST00000492909 TMEM190Q8WZ59 177 aa10.8□□□□□ -0.68
PDZRN3-210ENST00000492909 LY96Q9Y6Y9 160 aa10.8□□□□□ -0.68
PDZRN3-210ENST00000492909 A0A1B0GUS0 222 aa10.79□□□□□ -0.68
PDZRN3-210ENST00000492909 ZNF320A2RRD8 509 aa10.79□□□□□ -0.68
PDZRN3-210ENST00000492909 CD28P10747 220 aa10.79□□□□□ -0.68
PDZRN3-210ENST00000492909 GP9P14770 177 aa10.79□□□□□ -0.68
PDZRN3-210ENST00000492909 BPIFA4PQ86YQ2 179 aa10.79□□□□□ -0.68
PDZRN3-210ENST00000492909 C11orf44Q8N8P7 122 aa10.79□□□□□ -0.68
PDZRN3-210ENST00000492909 KLHL30-AS1Q8NEE0 82 aa10.79□□□□□ -0.68
PDZRN3-210ENST00000492909 OR10G8Q8NGN5 311 aa10.79□□□□□ -0.68
PDZRN3-210ENST00000492909 OCC1Q8TAD7 63 aa10.79□□□□□ -0.68
PDZRN3-210ENST00000492909 MDFIQ99750 246 aa10.79□□□□□ -0.68
PDZRN3-210ENST00000492909 TMEM14CQ9P0S9 112 aa10.79□□□□□ -0.68
PDZRN3-210ENST00000492909 IGHV4OR15-8A0A075B7B6 117 aa10.78□□□□□ -0.68
PDZRN3-210ENST00000492909 A0A087WW49 117 aa10.78□□□□□ -0.68
PDZRN3-210ENST00000492909 C9JCJ5 164 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms