RNA–Protein interactions for RNA: ENST00000492270.1

UPF3A-209, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2 BASIC

Gene UPF3A, Length 494 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-209ENST00000492270 CXCL3P19876 107 aa17.79■□□□□ 0.44
UPF3A-209ENST00000492270 FGF7P21781 194 aa17.79■□□□□ 0.44
UPF3A-209ENST00000492270 OPCMLQ14982 345 aa17.79■□□□□ 0.44
UPF3A-209ENST00000492270 AMTNQ6UX39 209 aa17.79■□□□□ 0.44
UPF3A-209ENST00000492270 ZNF738Q8NE65 137 aa17.79■□□□□ 0.44
UPF3A-209ENST00000492270 LINC00476Q8WZB0 136 aa17.79■□□□□ 0.44
UPF3A-209ENST00000492270 CELA1Q9UNI1 258 aa17.79■□□□□ 0.44
UPF3A-209ENST00000492270 ZNF705FA8MVS1 300 aaPredicted RBP17.78■□□□□ 0.44
UPF3A-209ENST00000492270 E5RGE8 158 aa17.78■□□□□ 0.44
UPF3A-209ENST00000492270 CNN1P51911 297 aaKnown RBP17.78■□□□□ 0.44
UPF3A-209ENST00000492270 ATP6V1FQ16864 119 aa17.78■□□□□ 0.44
UPF3A-209ENST00000492270 Q6ZRG5 221 aa17.78■□□□□ 0.44
UPF3A-209ENST00000492270 H3BTX0 84 aa17.77■□□□□ 0.44
UPF3A-209ENST00000492270 RLN2P04090 185 aa17.77■□□□□ 0.44
UPF3A-209ENST00000492270 B2MP61769 119 aa17.77■□□□□ 0.44
UPF3A-209ENST00000492270 OR5C1Q8NGR4 320 aa17.77■□□□□ 0.44
UPF3A-209ENST00000492270 LRRC20Q8TCA0 184 aa17.77■□□□□ 0.44
UPF3A-209ENST00000492270 HRH4Q9H3N8 390 aa17.77■□□□□ 0.44
UPF3A-209ENST00000492270 DNAJC4Q9NNZ3 241 aa17.77■□□□□ 0.44
UPF3A-209ENST00000492270 SLC39A9Q9NUM3 307 aa17.77■□□□□ 0.44
UPF3A-209ENST00000492270 RNF24Q9Y225 148 aa17.77■□□□□ 0.44
UPF3A-209ENST00000492270 TRAV5A0A0B4J249 113 aa17.76■□□□□ 0.43
UPF3A-209ENST00000492270 RPL29P47914 159 aaKnown RBP17.76■□□□□ 0.43
UPF3A-209ENST00000492270 CYCSP99999 105 aaKnown RBP17.76■□□□□ 0.43
UPF3A-209ENST00000492270 PSG3Q16557 428 aa17.76■□□□□ 0.43
UPF3A-209ENST00000492270 BPIFA4PQ86YQ2 179 aa17.76■□□□□ 0.43
UPF3A-209ENST00000492270 OR11H7Q8NGC8 314 aa17.76■□□□□ 0.43
UPF3A-209ENST00000492270 PPP1R1CQ8WVI7 109 aa17.76■□□□□ 0.43
UPF3A-209ENST00000492270 PXMP4Q9Y6I8 212 aa17.76■□□□□ 0.43
UPF3A-209ENST00000492270 SLC17A3O00476 420 aa17.75■□□□□ 0.43
UPF3A-209ENST00000492270 Q6ZTC4 211 aa17.75■□□□□ 0.43
UPF3A-209ENST00000492270 C1orf158Q8N1D5 194 aa17.75■□□□□ 0.43
UPF3A-209ENST00000492270 OR1L4Q8NGR5 311 aa17.75■□□□□ 0.43
UPF3A-209ENST00000492270 THAP6Q8TBB0 222 aa17.75■□□□□ 0.43
UPF3A-209ENST00000492270 NEU1Q99519 415 aa17.75■□□□□ 0.43
UPF3A-209ENST00000492270 SLC25A31Q9H0C2 315 aa17.75■□□□□ 0.43
UPF3A-209ENST00000492270 M0R2Z0 102 aa17.74■□□□□ 0.43
UPF3A-209ENST00000492270 DUSP14O95147 198 aaKnown RBP17.74■□□□□ 0.43
UPF3A-209ENST00000492270 LY6G6CO95867 125 aa17.74■□□□□ 0.43
UPF3A-209ENST00000492270 SPINK13Q1W4C9 94 aa17.74■□□□□ 0.43
UPF3A-209ENST00000492270 LCN15Q6UWW0 184 aa17.74■□□□□ 0.43
UPF3A-209ENST00000492270 ZNF767PQ75MW2 155 aa17.74■□□□□ 0.43
UPF3A-209ENST00000492270 CHAC2Q8WUX2 184 aa17.74■□□□□ 0.43
UPF3A-209ENST00000492270 NPCDR1Q9BY65 106 aa17.74■□□□□ 0.43
UPF3A-209ENST00000492270 ZNF331Q9NQX6 463 aaPredicted RBP17.74■□□□□ 0.43
UPF3A-209ENST00000492270 H3BQ15 152 aa17.73■□□□□ 0.43
UPF3A-209ENST00000492270 IGLC2P0DOY2 106 aa17.73■□□□□ 0.43
UPF3A-209ENST00000492270 CXCL2P19875 107 aa17.73■□□□□ 0.43
UPF3A-209ENST00000492270 HIST1H1AQ02539 215 aaPredicted RBP17.73■□□□□ 0.43
UPF3A-209ENST00000492270 CLINT1Q14677 625 aa17.73■□□□□ 0.43
UPF3A-209ENST00000492270 PFDN5Q99471 154 aa17.73■□□□□ 0.43
UPF3A-209ENST00000492270 RNF126Q9BV68 326 aa17.73■□□□□ 0.43
UPF3A-209ENST00000492270 MPC2O95563 127 aa17.72■□□□□ 0.43
UPF3A-209ENST00000492270 GCSAMLQ5JQS6 135 aa17.72■□□□□ 0.43
UPF3A-209ENST00000492270 OR8A1Q8NGG7 326 aa17.72■□□□□ 0.43
UPF3A-209ENST00000492270 RPUSD4Q96CM3 377 aaKnown RBP17.72■□□□□ 0.43
UPF3A-209ENST00000492270 SLC50A1Q9BRV3 221 aa17.72■□□□□ 0.43
UPF3A-209ENST00000492270 GOLT1BQ9Y3E0 138 aa17.72■□□□□ 0.43
UPF3A-209ENST00000492270 MPDU1O75352 247 aa17.71■□□□□ 0.43
UPF3A-209ENST00000492270 EMP1P54849 157 aa17.71■□□□□ 0.43
UPF3A-209ENST00000492270 C2CD4CQ8TF44 421 aa17.71■□□□□ 0.43
UPF3A-209ENST00000492270 IGF2BP2-AS1Q96M15 143 aa17.71■□□□□ 0.43
UPF3A-209ENST00000492270 ALG5Q9Y673 324 aa17.71■□□□□ 0.43
UPF3A-209ENST00000492270 SMIM9A6NGZ8 99 aa17.7■□□□□ 0.42
UPF3A-209ENST00000492270 CRXO43186 299 aaPredicted RBP17.7■□□□□ 0.42
UPF3A-209ENST00000492270 C12orf74Q32Q52 190 aa17.7■□□□□ 0.42
UPF3A-209ENST00000492270 BAP18Q8IXM2 172 aa17.7■□□□□ 0.42
UPF3A-209ENST00000492270 RFNGQ9Y644 331 aa17.7■□□□□ 0.42
UPF3A-209ENST00000492270 C11orf94C9JXX5 98 aa17.69■□□□□ 0.42
UPF3A-209ENST00000492270 SAT2Q96F10 170 aaPredicted RBP17.69■□□□□ 0.42
UPF3A-209ENST00000492270 TRAV12-2A0A075B6T6 113 aa17.68■□□□□ 0.42
UPF3A-209ENST00000492270 PRAC2D3DTV9 90 aa17.68■□□□□ 0.42
UPF3A-209ENST00000492270 BOLA2-SMG1P6H3BVE0 249 aa17.68■□□□□ 0.42
UPF3A-209ENST00000492270 RHOBP62745 196 aa17.68■□□□□ 0.42
UPF3A-209ENST00000492270 WDR61Q9GZS3 305 aaKnown RBP17.68■□□□□ 0.42
UPF3A-209ENST00000492270 ZNF586Q9NXT0 402 aa17.68■□□□□ 0.42
UPF3A-209ENST00000492270 MBD2Q9UBB5 411 aa17.68■□□□□ 0.42
UPF3A-209ENST00000492270 TRAV10A0A0B4J240 114 aa17.67■□□□□ 0.42
UPF3A-209ENST00000492270 PTTG1O95997 202 aa17.67■□□□□ 0.42
UPF3A-209ENST00000492270 INSP01308 110 aa17.67■□□□□ 0.42
UPF3A-209ENST00000492270 HBE1P02100 147 aa17.67■□□□□ 0.42
UPF3A-209ENST00000492270 AMBPP02760 352 aa17.67■□□□□ 0.42
UPF3A-209ENST00000492270 TMEM208Q9BTX3 173 aa17.67■□□□□ 0.42
UPF3A-209ENST00000492270 HSPB11Q9Y547 144 aa17.67■□□□□ 0.42
UPF3A-209ENST00000492270 LOC102723971A0A1B0GUV8 181 aa17.66■□□□□ 0.42
UPF3A-209ENST00000492270 IGLL5B9A064 214 aa17.66■□□□□ 0.42
UPF3A-209ENST00000492270 PRM2P04554 102 aa17.66■□□□□ 0.42
UPF3A-209ENST00000492270 PET100P0DJ07 73 aa17.66■□□□□ 0.42
UPF3A-209ENST00000492270 TMEM189A5PLL7 270 aa17.65■□□□□ 0.42
UPF3A-209ENST00000492270 PYYP10082 97 aa17.65■□□□□ 0.42
UPF3A-209ENST00000492270 ATP5SQ99766 215 aa17.65■□□□□ 0.42
UPF3A-209ENST00000492270 SMIM3Q9BZL3 60 aa17.65■□□□□ 0.42
UPF3A-209ENST00000492270 SPART-AS1P0CW21 52 aa17.64■□□□□ 0.41
UPF3A-209ENST00000492270 RPL12P30050 165 aaKnown RBP17.64■□□□□ 0.41
UPF3A-209ENST00000492270 GUK1Q16774 197 aa17.64■□□□□ 0.41
UPF3A-209ENST00000492270 RRN3P1Q2M238 152 aa17.64■□□□□ 0.41
UPF3A-209ENST00000492270 SLC25A2Q9BXI2 301 aa17.64■□□□□ 0.41
UPF3A-209ENST00000492270 PARD6GQ9BYG4 376 aaPredicted RBP17.64■□□□□ 0.41
UPF3A-209ENST00000492270 PPP1R14DQ9NXH3 145 aa17.64■□□□□ 0.41
UPF3A-209ENST00000492270 TMEM14CQ9P0S9 112 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms