RNA–Protein interactions for RNA: ENST00000490677.1

HOXB3-211, Transcript of homeobox B3, humanhuman

TSL 1 (best) BASIC

Gene HOXB3, Length 1,109 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-211ENST00000490677 TMEM37Q8WXS4 190 aa19.72■□□□□ 0.75
HOXB3-211ENST00000490677 NUDT15Q9NV35 164 aa19.72■□□□□ 0.75
HOXB3-211ENST00000490677 KIAA1109Q2LD37 5005 aa19.71■□□□□ 0.75
HOXB3-211ENST00000490677 PRB4P10163 310 aaPredicted RBP19.71■□□□□ 0.75
HOXB3-211ENST00000490677 PSG3Q16557 428 aa19.71■□□□□ 0.75
HOXB3-211ENST00000490677 OR8A1Q8NGG7 326 aa19.71■□□□□ 0.75
HOXB3-211ENST00000490677 ZNF431Q8TF32 576 aaPredicted RBP19.71■□□□□ 0.75
HOXB3-211ENST00000490677 FAM210BQ96KR6 192 aa19.71■□□□□ 0.75
HOXB3-211ENST00000490677 PLAC8L1A1L4L8 177 aa19.7■□□□□ 0.74
HOXB3-211ENST00000490677 LINC00305Q7Z4B0 112 aa19.7■□□□□ 0.74
HOXB3-211ENST00000490677 ZNF705GA8MUZ8 300 aaPredicted RBP19.69■□□□□ 0.74
HOXB3-211ENST00000490677 BOLA2-SMG1P6H3BVE0 249 aa19.69■□□□□ 0.74
HOXB3-211ENST00000490677 GOSR2O14653 212 aa19.69■□□□□ 0.74
HOXB3-211ENST00000490677 INSP01308 110 aa19.69■□□□□ 0.74
HOXB3-211ENST00000490677 IL15RAQ13261 267 aa19.69■□□□□ 0.74
HOXB3-211ENST00000490677 LSM5Q9Y4Y9 91 aaKnown RBP19.69■□□□□ 0.74
HOXB3-211ENST00000490677 TRAV12-2A0A075B6T6 113 aa19.68■□□□□ 0.74
HOXB3-211ENST00000490677 TMEM208Q9BTX3 173 aa19.68■□□□□ 0.74
HOXB3-211ENST00000490677 CCDC32Q9BV29 185 aa19.68■□□□□ 0.74
HOXB3-211ENST00000490677 ZNF331Q9NQX6 463 aaPredicted RBP19.68■□□□□ 0.74
HOXB3-211ENST00000490677 CXCL2P19875 107 aa19.67■□□□□ 0.74
HOXB3-211ENST00000490677 AZU1P20160 251 aa19.67■□□□□ 0.74
HOXB3-211ENST00000490677 HIST1H1AQ02539 215 aaPredicted RBP19.67■□□□□ 0.74
HOXB3-211ENST00000490677 C12orf45Q8N5I9 185 aaPredicted RBP19.67■□□□□ 0.74
HOXB3-211ENST00000490677 DYNC1H1Q14204 4646 aaKnown RBP19.66■□□□□ 0.74
HOXB3-211ENST00000490677 SNRPCP09234 159 aaKnown RBP19.66■□□□□ 0.74
HOXB3-211ENST00000490677 TSPOP30536 169 aa19.66■□□□□ 0.74
HOXB3-211ENST00000490677 ZNF846Q147U1 533 aa19.66■□□□□ 0.74
HOXB3-211ENST00000490677 S100A7AQ86SG5 101 aa19.66■□□□□ 0.74
HOXB3-211ENST00000490677 C2orf50Q96LR7 162 aa19.66■□□□□ 0.74
HOXB3-211ENST00000490677 FAM24AA6NFZ4 105 aa19.65■□□□□ 0.74
HOXB3-211ENST00000490677 FAM25EA8MYX2 175 aa19.65■□□□□ 0.74
HOXB3-211ENST00000490677 L7N2F9 121 aa19.65■□□□□ 0.74
HOXB3-211ENST00000490677 SLC17A3O00476 420 aa19.65■□□□□ 0.74
HOXB3-211ENST00000490677 CST7O76096 145 aa19.65■□□□□ 0.74
HOXB3-211ENST00000490677 IGLC2P0DOY2 106 aa19.65■□□□□ 0.74
HOXB3-211ENST00000490677 VAMP2P63027 116 aa19.65■□□□□ 0.74
HOXB3-211ENST00000490677 OPCMLQ14982 345 aa19.65■□□□□ 0.74
HOXB3-211ENST00000490677 VWC2Q2TAL6 325 aa19.65■□□□□ 0.74
HOXB3-211ENST00000490677 LCN15Q6UWW0 184 aa19.65■□□□□ 0.74
HOXB3-211ENST00000490677 RPUSD4Q96CM3 377 aaKnown RBP19.65■□□□□ 0.74
HOXB3-211ENST00000490677 WDR83OSQ9Y284 106 aa19.65■□□□□ 0.74
HOXB3-211ENST00000490677 H2AFB2P0C5Z0 115 aa19.64■□□□□ 0.73
HOXB3-211ENST00000490677 HTN3P15516 51 aa19.64■□□□□ 0.73
HOXB3-211ENST00000490677 DAD1P61803 113 aa19.64■□□□□ 0.73
HOXB3-211ENST00000490677 RNF24Q9Y225 148 aa19.64■□□□□ 0.73
HOXB3-211ENST00000490677 A0A1B0GVY2 172 aa19.63■□□□□ 0.73
HOXB3-211ENST00000490677 C5orf51A6NDU8 294 aa19.63■□□□□ 0.73
HOXB3-211ENST00000490677 COX7A2P2O60397 106 aa19.63■□□□□ 0.73
HOXB3-211ENST00000490677 CAMLGP49069 296 aa19.63■□□□□ 0.73
HOXB3-211ENST00000490677 B2MP61769 119 aa19.63■□□□□ 0.73
HOXB3-211ENST00000490677 TMEM88Q6PEY1 159 aa19.63■□□□□ 0.73
HOXB3-211ENST00000490677 NRARPQ7Z6K4 114 aa19.63■□□□□ 0.73
HOXB3-211ENST00000490677 SAT2Q96F10 170 aaPredicted RBP19.63■□□□□ 0.73
HOXB3-211ENST00000490677 SLC50A1Q9BRV3 221 aa19.63■□□□□ 0.73
HOXB3-211ENST00000490677 IGSF23A1L1A6 192 aa19.62■□□□□ 0.73
HOXB3-211ENST00000490677 LYRM9A8MSI8 78 aa19.62■□□□□ 0.73
HOXB3-211ENST00000490677 PRAC2D3DTV9 90 aa19.62■□□□□ 0.73
HOXB3-211ENST00000490677 H3BQ15 152 aa19.62■□□□□ 0.73
HOXB3-211ENST00000490677 CAV2P51636 162 aa19.62■□□□□ 0.73
HOXB3-211ENST00000490677 C10orf113Q5VZT2 155 aa19.62■□□□□ 0.73
HOXB3-211ENST00000490677 MIC13Q5XKP0 118 aa19.62■□□□□ 0.73
HOXB3-211ENST00000490677 LINC00299Q6ZSB3 139 aa19.62■□□□□ 0.73
HOXB3-211ENST00000490677 BPIFA4PQ86YQ2 179 aa19.62■□□□□ 0.73
HOXB3-211ENST00000490677 LRRC20Q8TCA0 184 aa19.62■□□□□ 0.73
HOXB3-211ENST00000490677 H3BTX0 84 aa19.61■□□□□ 0.73
HOXB3-211ENST00000490677 RTL8CO15255 209 aa19.61■□□□□ 0.73
HOXB3-211ENST00000490677 BCAP31P51572 246 aa19.61■□□□□ 0.73
HOXB3-211ENST00000490677 RHOBP62745 196 aa19.61■□□□□ 0.73
HOXB3-211ENST00000490677 KIR3DS1Q14943 382 aa19.61■□□□□ 0.73
HOXB3-211ENST00000490677 LYRM2Q9NU23 88 aaPredicted RBP19.61■□□□□ 0.73
HOXB3-211ENST00000490677 DNAH11Q96DT5 4516 aa19.61■□□□□ 0.73
HOXB3-211ENST00000490677 RAB32Q13637 225 aa19.6■□□□□ 0.73
HOXB3-211ENST00000490677 FCN2Q15485 313 aa19.6■□□□□ 0.73
HOXB3-211ENST00000490677 Q6ZR54 194 aa19.6■□□□□ 0.73
HOXB3-211ENST00000490677 LINC00336Q6ZUF6 198 aa19.6■□□□□ 0.73
HOXB3-211ENST00000490677 TMEM256Q8N2U0 113 aa19.6■□□□□ 0.73
HOXB3-211ENST00000490677 DNAJC4Q9NNZ3 241 aa19.6■□□□□ 0.73
HOXB3-211ENST00000490677 UQCC1Q9NVA1 299 aa19.6■□□□□ 0.73
HOXB3-211ENST00000490677 TRAV5A0A0B4J249 113 aa19.59■□□□□ 0.73
HOXB3-211ENST00000490677 LGALS9BQ3B8N2 356 aa19.59■□□□□ 0.73
HOXB3-211ENST00000490677 TMEM252Q8N6L7 170 aa19.59■□□□□ 0.73
HOXB3-211ENST00000490677 FAM240BA0A1B0GVZ2 78 aa19.58■□□□□ 0.72
HOXB3-211ENST00000490677 M0R2N4 97 aa19.58■□□□□ 0.72
HOXB3-211ENST00000490677 CDKN1BP46527 198 aa19.58■□□□□ 0.72
HOXB3-211ENST00000490677 SULT1A1P50225 295 aa19.58■□□□□ 0.72
HOXB3-211ENST00000490677 TAS2R60P59551 318 aa19.58■□□□□ 0.72
HOXB3-211ENST00000490677 ASAH1Q13510 395 aa19.58■□□□□ 0.72
HOXB3-211ENST00000490677 CHAC2Q8WUX2 184 aa19.58■□□□□ 0.72
HOXB3-211ENST00000490677 LINC01587Q99440 93 aa19.58■□□□□ 0.72
HOXB3-211ENST00000490677 PARD6GQ9BYG4 376 aaPredicted RBP19.58■□□□□ 0.72
HOXB3-211ENST00000490677 RPL29P47914 159 aaKnown RBP19.57■□□□□ 0.72
HOXB3-211ENST00000490677 RNF212Q495C1 297 aa19.57■□□□□ 0.72
HOXB3-211ENST00000490677 S100A10P60903 97 aa19.56■□□□□ 0.72
HOXB3-211ENST00000490677 RAB31Q13636 194 aa19.56■□□□□ 0.72
HOXB3-211ENST00000490677 RNASE8Q8TDE3 154 aaKnown RBP19.56■□□□□ 0.72
HOXB3-211ENST00000490677 UBE2L5PA0A1B0GUS4 154 aa19.55■□□□□ 0.72
HOXB3-211ENST00000490677 DEFB130BP0DP73 79 aa19.55■□□□□ 0.72
HOXB3-211ENST00000490677 DEFB130AP0DP74 79 aa19.55■□□□□ 0.72
HOXB3-211ENST00000490677 PVALBP20472 110 aaPredicted RBP19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms