RNA–Protein interactions for RNA: ENST00000489816.5

BRD9-208, Transcript of bromodomain containing 9, human

TSL 1 (best)

Gene BRD9, Length 3,170 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BRD9-208	ENST00000489816	CREBBP	Q92793	2442 aa		12.35	□□□□□ -0.43
BRD9-208	ENST00000489816	NDUFB8	O95169	186 aa		12.35	□□□□□ -0.43
BRD9-208	ENST00000489816	RAB4A	P20338	218 aa		12.35	□□□□□ -0.43
BRD9-208	ENST00000489816		Q6ZVH6	145 aa		12.35	□□□□□ -0.43
BRD9-208	ENST00000489816		Q8TAT8	98 aa		12.35	□□□□□ -0.43
BRD9-208	ENST00000489816	FANCD2OS	Q96PS1	177 aa		12.35	□□□□□ -0.43
BRD9-208	ENST00000489816	TMUB1	Q9BVT8	246 aa		12.35	□□□□□ -0.43
BRD9-208	ENST00000489816	ACACB	O00763	2458 aa		12.35	□□□□□ -0.43
BRD9-208	ENST00000489816	TRBV19	A0A075B6N1	114 aa		12.35	□□□□□ -0.43
BRD9-208	ENST00000489816	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	12.35	□□□□□ -0.43
BRD9-208	ENST00000489816	IGKV2D-40	P01614	121 aa	Predicted RBP	12.35	□□□□□ -0.43
BRD9-208	ENST00000489816	ECSCR	Q19T08	205 aa		12.35	□□□□□ -0.43
BRD9-208	ENST00000489816		Q6ZN92	141 aa		12.35	□□□□□ -0.43
BRD9-208	ENST00000489816	MSRB2	Q9Y3D2	182 aa		12.35	□□□□□ -0.43
BRD9-208	ENST00000489816	C19orf71	A6NCJ1	209 aa		12.34	□□□□□ -0.43
BRD9-208	ENST00000489816	FXYD7	P58549	80 aa		12.34	□□□□□ -0.43
BRD9-208	ENST00000489816	OTOR	Q9NRC9	128 aa		12.34	□□□□□ -0.43
BRD9-208	ENST00000489816	LINC00527	Q9UJ94	153 aa		12.34	□□□□□ -0.43
BRD9-208	ENST00000489816	FAM181B	A6NEQ2	426 aa		12.34	□□□□□ -0.43
BRD9-208	ENST00000489816	TCTA	P57738	103 aa		12.34	□□□□□ -0.43
BRD9-208	ENST00000489816	KLRB1	Q12918	225 aa		12.34	□□□□□ -0.43
BRD9-208	ENST00000489816	COX19	Q49B96	90 aa		12.34	□□□□□ -0.43
BRD9-208	ENST00000489816	LY6G5B	Q8NDX9	201 aa		12.34	□□□□□ -0.43
BRD9-208	ENST00000489816	SHANK2-AS3	Q9BTD1	123 aa		12.34	□□□□□ -0.43
BRD9-208	ENST00000489816	PRSS22	Q9GZN4	317 aa		12.34	□□□□□ -0.43
BRD9-208	ENST00000489816	CRIP1	P50238	77 aa		12.34	□□□□□ -0.43
BRD9-208	ENST00000489816	PVRIG	Q6DKI7	326 aa		12.34	□□□□□ -0.43
BRD9-208	ENST00000489816	ARPC1A	Q92747	370 aa		12.34	□□□□□ -0.43
BRD9-208	ENST00000489816	C20orf144	Q9BQM9	153 aa		12.34	□□□□□ -0.43
BRD9-208	ENST00000489816	SELENOK	Q9Y6D0	94 aa		12.34	□□□□□ -0.43
BRD9-208	ENST00000489816	SERTM2	A0A1B0GWG4	89 aa		12.33	□□□□□ -0.44
BRD9-208	ENST00000489816		A0A1B0GXF2	115 aa		12.33	□□□□□ -0.44
BRD9-208	ENST00000489816	CEACAM3	P40198	252 aa		12.33	□□□□□ -0.44
BRD9-208	ENST00000489816	SIGLEC15	Q6ZMC9	328 aa		12.33	□□□□□ -0.44
BRD9-208	ENST00000489816	RBPMS2	Q6ZRY4	209 aa	Known RBP	12.33	□□□□□ -0.44
BRD9-208	ENST00000489816	CHRDL1	Q9BU40	450 aa		12.33	□□□□□ -0.44
BRD9-208	ENST00000489816	PSG8	Q9UQ74	426 aa		12.33	□□□□□ -0.44
BRD9-208	ENST00000489816	PLP1	P60201	277 aa		12.33	□□□□□ -0.44
BRD9-208	ENST00000489816	LINC01548	A6NM66	108 aa		12.32	□□□□□ -0.44
BRD9-208	ENST00000489816	ZNF207	O43670	478 aa	Known RBP	12.32	□□□□□ -0.44
BRD9-208	ENST00000489816	PRTN3	P24158	256 aa		12.32	□□□□□ -0.44
BRD9-208	ENST00000489816	USP9X	Q93008	2570 aa	Predicted RBP	12.32	□□□□□ -0.44
BRD9-208	ENST00000489816	LOC389332	A0A1B0GUA5	103 aa		12.32	□□□□□ -0.44
BRD9-208	ENST00000489816	TMEM11	P17152	192 aa		12.32	□□□□□ -0.44
BRD9-208	ENST00000489816	OR11H6	Q8NGC7	330 aa		12.32	□□□□□ -0.44
BRD9-208	ENST00000489816	UQCRFS1	P47985	274 aa		12.32	□□□□□ -0.44
BRD9-208	ENST00000489816	WIPF2	Q8TF74	440 aa	Predicted RBP	12.32	□□□□□ -0.44
BRD9-208	ENST00000489816	C21orf62	Q9NYP8	219 aa		12.32	□□□□□ -0.44
BRD9-208	ENST00000489816		H3BRN7	92 aa		12.31	□□□□□ -0.44
BRD9-208	ENST00000489816	OR4B1	Q8NGF8	309 aa		12.31	□□□□□ -0.44
BRD9-208	ENST00000489816	ZNF414	Q96IQ9	312 aa		12.31	□□□□□ -0.44
BRD9-208	ENST00000489816	ZAN	Q9Y493	2812 aa		12.31	□□□□□ -0.44
BRD9-208	ENST00000489816		G3V318	75 aa		12.31	□□□□□ -0.44
BRD9-208	ENST00000489816	IGLC2	P0DOY2	106 aa		12.31	□□□□□ -0.44
BRD9-208	ENST00000489816	GPR183	P32249	361 aa		12.31	□□□□□ -0.44
BRD9-208	ENST00000489816	HINT1	P49773	126 aa	Predicted RBP	12.31	□□□□□ -0.44
BRD9-208	ENST00000489816	TMEM75	Q8N9X5	138 aa		12.31	□□□□□ -0.44
BRD9-208	ENST00000489816		F8W735	103 aa	Predicted RBP	12.3	□□□□□ -0.44
BRD9-208	ENST00000489816	MFAP4	P55083	255 aa		12.3	□□□□□ -0.44
BRD9-208	ENST00000489816	LBH	Q53QV2	105 aa	Predicted RBP	12.3	□□□□□ -0.44
BRD9-208	ENST00000489816	C1RL	Q9NZP8	487 aa		12.3	□□□□□ -0.44
BRD9-208	ENST00000489816	hDV102S1	A0JD36	115 aa		12.3	□□□□□ -0.44
BRD9-208	ENST00000489816	TMEM213	A2RRL7	107 aa		12.3	□□□□□ -0.44
BRD9-208	ENST00000489816	NPIPB5	A8MRT5	1133 aa		12.3	□□□□□ -0.44
BRD9-208	ENST00000489816	IGLC3	P0DOY3	106 aa		12.3	□□□□□ -0.44
BRD9-208	ENST00000489816	FBXL19-AS1	Q494R0	122 aa		12.3	□□□□□ -0.44
BRD9-208	ENST00000489816	TMEM219	Q86XT9	240 aa		12.3	□□□□□ -0.44
BRD9-208	ENST00000489816	CTRL	P40313	264 aa		12.29	□□□□□ -0.44
BRD9-208	ENST00000489816	HNRNPA3	P51991	378 aa	Known RBP	12.29	□□□□□ -0.44
BRD9-208	ENST00000489816	ZNF562	Q6V9R5	426 aa		12.29	□□□□□ -0.44
BRD9-208	ENST00000489816	ERAS	Q7Z444	233 aa		12.29	□□□□□ -0.44
BRD9-208	ENST00000489816	IGHV1-24	A0A0C4DH33	117 aa		12.29	□□□□□ -0.44
BRD9-208	ENST00000489816	C2orf70	A6NJV1	201 aa		12.29	□□□□□ -0.44
BRD9-208	ENST00000489816	FAM106CP	P0CH98	169 aa		12.29	□□□□□ -0.44
BRD9-208	ENST00000489816	IGLL1	P15814	213 aa		12.29	□□□□□ -0.44
BRD9-208	ENST00000489816	BTF3	P20290	206 aa	Known RBP	12.29	□□□□□ -0.44
BRD9-208	ENST00000489816	FAM106A	Q4KMX7	169 aa		12.29	□□□□□ -0.44
BRD9-208	ENST00000489816	BPESC1	Q9GZL8	116 aa		12.29	□□□□□ -0.44
BRD9-208	ENST00000489816	IGLV11-55	A0A075B6I3	123 aa		12.28	□□□□□ -0.44
BRD9-208	ENST00000489816	PPIF	P30405	207 aa	Known RBP	12.28	□□□□□ -0.44
BRD9-208	ENST00000489816	C11orf71	Q6IPW1	123 aa		12.28	□□□□□ -0.44
BRD9-208	ENST00000489816	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	12.28	□□□□□ -0.44
BRD9-208	ENST00000489816	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	12.28	□□□□□ -0.44
BRD9-208	ENST00000489816	RPLP1	P05386	114 aa	Known RBP	12.28	□□□□□ -0.44
BRD9-208	ENST00000489816	HOXB4	P17483	251 aa	Predicted RBP	12.28	□□□□□ -0.44
BRD9-208	ENST00000489816	PSG3	Q16557	428 aa		12.28	□□□□□ -0.44
BRD9-208	ENST00000489816	STPG4	Q8N801	248 aa		12.28	□□□□□ -0.44
BRD9-208	ENST00000489816	AAMDC	Q9H7C9	122 aa		12.28	□□□□□ -0.44
BRD9-208	ENST00000489816	TMEM14C	Q9P0S9	112 aa		12.28	□□□□□ -0.44
BRD9-208	ENST00000489816	SORL1	Q92673	2214 aa		12.28	□□□□□ -0.44
BRD9-208	ENST00000489816		A0A1B0GUT8	65 aa		12.28	□□□□□ -0.44
BRD9-208	ENST00000489816	NDUFA3	O95167	84 aa		12.28	□□□□□ -0.44
BRD9-208	ENST00000489816	LINC00614	P0C842	121 aa		12.28	□□□□□ -0.44
BRD9-208	ENST00000489816	RASL11A	Q6T310	242 aa		12.28	□□□□□ -0.44
BRD9-208	ENST00000489816	UNQ5815/PRO19632	Q6UWF5	114 aa		12.28	□□□□□ -0.44
BRD9-208	ENST00000489816	RNF182	Q8N6D2	247 aa		12.28	□□□□□ -0.44
BRD9-208	ENST00000489816	VGLL1	Q99990	258 aa		12.28	□□□□□ -0.44
BRD9-208	ENST00000489816	IGHV7-81	A0A0B4J1V7	117 aa		12.27	□□□□□ -0.44
BRD9-208	ENST00000489816	ODF3B	A8MYP8	253 aa		12.27	□□□□□ -0.44
BRD9-208	ENST00000489816	LEPROTL1	O95214	131 aa		12.27	□□□□□ -0.44

Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms