RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 RNF24Q9Y225 148 aa16.41■□□□□ 0.22
COL9A3-213ENST00000489045 YTHDF2Q9Y5A9 579 aaKnown RBP16.41■□□□□ 0.22
COL9A3-213ENST00000489045 CRXO43186 299 aaPredicted RBP16.4■□□□□ 0.22
COL9A3-213ENST00000489045 INSP01308 110 aa16.4■□□□□ 0.22
COL9A3-213ENST00000489045 PSG3Q16557 428 aa16.4■□□□□ 0.22
COL9A3-213ENST00000489045 LINC00305Q7Z4B0 112 aa16.4■□□□□ 0.22
COL9A3-213ENST00000489045 PLA2G2EQ9NZK7 142 aa16.4■□□□□ 0.22
COL9A3-213ENST00000489045 FAM240BA0A1B0GVZ2 78 aa16.39■□□□□ 0.21
COL9A3-213ENST00000489045 FAM24AA6NFZ4 105 aa16.39■□□□□ 0.21
COL9A3-213ENST00000489045 COX7A2P2O60397 106 aa16.39■□□□□ 0.21
COL9A3-213ENST00000489045 CST7O76096 145 aa16.39■□□□□ 0.21
COL9A3-213ENST00000489045 HIST1H1AQ02539 215 aaPredicted RBP16.39■□□□□ 0.21
COL9A3-213ENST00000489045 BAP18Q8IXM2 172 aa16.39■□□□□ 0.21
COL9A3-213ENST00000489045 OR8A1Q8NGG7 326 aa16.39■□□□□ 0.21
COL9A3-213ENST00000489045 BOLA2-SMG1P6H3BVE0 249 aa16.38■□□□□ 0.21
COL9A3-213ENST00000489045 PRB4P10163 310 aaPredicted RBP16.38■□□□□ 0.21
COL9A3-213ENST00000489045 S100A10P60903 97 aa16.38■□□□□ 0.21
COL9A3-213ENST00000489045 LINC00299Q6ZSB3 139 aa16.38■□□□□ 0.21
COL9A3-213ENST00000489045 TMEM37Q8WXS4 190 aa16.38■□□□□ 0.21
COL9A3-213ENST00000489045 SNRPCP09234 159 aaKnown RBP16.37■□□□□ 0.21
COL9A3-213ENST00000489045 CXCL2P19875 107 aa16.37■□□□□ 0.21
COL9A3-213ENST00000489045 PVALBP20472 110 aaPredicted RBP16.37■□□□□ 0.21
COL9A3-213ENST00000489045 CAMLGP49069 296 aa16.37■□□□□ 0.21
COL9A3-213ENST00000489045 RHOBP62745 196 aa16.37■□□□□ 0.21
COL9A3-213ENST00000489045 MORN5Q5VZ52 161 aa16.37■□□□□ 0.21
COL9A3-213ENST00000489045 MZT2BQ6NZ67 158 aa16.37■□□□□ 0.21
COL9A3-213ENST00000489045 LCN15Q6UWW0 184 aa16.37■□□□□ 0.21
COL9A3-213ENST00000489045 NRARPQ7Z6K4 114 aa16.37■□□□□ 0.21
COL9A3-213ENST00000489045 TRAV12-2A0A075B6T6 113 aa16.36■□□□□ 0.21
COL9A3-213ENST00000489045 ZNF705GA8MUZ8 300 aaPredicted RBP16.36■□□□□ 0.21
COL9A3-213ENST00000489045 PRM2P04554 102 aa16.36■□□□□ 0.21
COL9A3-213ENST00000489045 RAB31Q13636 194 aa16.36■□□□□ 0.21
COL9A3-213ENST00000489045 OXA1LQ15070 435 aa16.36■□□□□ 0.21
COL9A3-213ENST00000489045 C10orf113Q5VZT2 155 aa16.36■□□□□ 0.21
COL9A3-213ENST00000489045 BPIFA4PQ86YQ2 179 aa16.36■□□□□ 0.21
COL9A3-213ENST00000489045 S100ZQ8WXG8 99 aa16.36■□□□□ 0.21
COL9A3-213ENST00000489045 RPUSD4Q96CM3 377 aaKnown RBP16.36■□□□□ 0.21
COL9A3-213ENST00000489045 ZNF331Q9NQX6 463 aaPredicted RBP16.36■□□□□ 0.21
COL9A3-213ENST00000489045 LYRM2Q9NU23 88 aaPredicted RBP16.36■□□□□ 0.21
COL9A3-213ENST00000489045 UQCC1Q9NVA1 299 aa16.36■□□□□ 0.21
COL9A3-213ENST00000489045 P0DMU3 169 aa16.35■□□□□ 0.21
COL9A3-213ENST00000489045 FAM231AP0DMU4 169 aa16.35■□□□□ 0.21
COL9A3-213ENST00000489045 FAM231CP0DMU5 169 aa16.35■□□□□ 0.21
COL9A3-213ENST00000489045 HTN3P15516 51 aa16.35■□□□□ 0.21
COL9A3-213ENST00000489045 IL15RAQ13261 267 aa16.35■□□□□ 0.21
COL9A3-213ENST00000489045 ASAH1Q13510 395 aa16.35■□□□□ 0.21
COL9A3-213ENST00000489045 RAB32Q13637 225 aa16.35■□□□□ 0.21
COL9A3-213ENST00000489045 OPCMLQ14982 345 aa16.35■□□□□ 0.21
COL9A3-213ENST00000489045 MIC13Q5XKP0 118 aa16.35■□□□□ 0.21
COL9A3-213ENST00000489045 SLC50A1Q9BRV3 221 aa16.35■□□□□ 0.21
COL9A3-213ENST00000489045 PPP1R14DQ9NXH3 145 aa16.35■□□□□ 0.21
COL9A3-213ENST00000489045 WDR83OSQ9Y284 106 aa16.35■□□□□ 0.21
COL9A3-213ENST00000489045 IGSF23A1L1A6 192 aa16.34■□□□□ 0.21
COL9A3-213ENST00000489045 SULT1A1P50225 295 aa16.34■□□□□ 0.21
COL9A3-213ENST00000489045 DAD1P61803 113 aa16.34■□□□□ 0.21
COL9A3-213ENST00000489045 FAM210BQ96KR6 192 aa16.34■□□□□ 0.21
COL9A3-213ENST00000489045 UBE2L5PA0A1B0GUS4 154 aa16.33■□□□□ 0.2
COL9A3-213ENST00000489045 H3BTX0 84 aa16.33■□□□□ 0.2
COL9A3-213ENST00000489045 SLC17A3O00476 420 aa16.33■□□□□ 0.2
COL9A3-213ENST00000489045 B2MP61769 119 aa16.33■□□□□ 0.2
COL9A3-213ENST00000489045 VWC2Q2TAL6 325 aa16.33■□□□□ 0.2
COL9A3-213ENST00000489045 Q6ZRG5 221 aa16.33■□□□□ 0.2
COL9A3-213ENST00000489045 POM121L12Q8N7R1 296 aa16.33■□□□□ 0.2
COL9A3-213ENST00000489045 DNAJC4Q9NNZ3 241 aa16.33■□□□□ 0.2
COL9A3-213ENST00000489045 S100A11P31949 105 aa16.32■□□□□ 0.2
COL9A3-213ENST00000489045 STX12Q86Y82 276 aa16.32■□□□□ 0.2
COL9A3-213ENST00000489045 TMEM252Q8N6L7 170 aa16.32■□□□□ 0.2
COL9A3-213ENST00000489045 IGLC2P0DOY2 106 aa16.31■□□□□ 0.2
COL9A3-213ENST00000489045 BAXQ07812 192 aa16.31■□□□□ 0.2
COL9A3-213ENST00000489045 OR1L4Q8NGR5 311 aa16.31■□□□□ 0.2
COL9A3-213ENST00000489045 ENKURQ8TC29 256 aa16.31■□□□□ 0.2
COL9A3-213ENST00000489045 HECTD4Q9Y4D8 3996 aa16.3■□□□□ 0.2
COL9A3-213ENST00000489045 TRAV5A0A0B4J249 113 aa16.3■□□□□ 0.2
COL9A3-213ENST00000489045 LYRM9A8MSI8 78 aa16.3■□□□□ 0.2
COL9A3-213ENST00000489045 AZU1P20160 251 aa16.3■□□□□ 0.2
COL9A3-213ENST00000489045 TSPOP30536 169 aa16.3■□□□□ 0.2
COL9A3-213ENST00000489045 HBG1P69891 147 aa16.3■□□□□ 0.2
COL9A3-213ENST00000489045 HBG2P69892 147 aa16.3■□□□□ 0.2
COL9A3-213ENST00000489045 TMEM256Q8N2U0 113 aa16.3■□□□□ 0.2
COL9A3-213ENST00000489045 LINC01587Q99440 93 aa16.3■□□□□ 0.2
COL9A3-213ENST00000489045 PFDN5Q99471 154 aa16.3■□□□□ 0.2
COL9A3-213ENST00000489045 PXMP4Q9Y6I8 212 aa16.3■□□□□ 0.2
COL9A3-213ENST00000489045 PLAC8L1A1L4L8 177 aa16.29■□□□□ 0.2
COL9A3-213ENST00000489045 H3BQ15 152 aa16.29■□□□□ 0.2
COL9A3-213ENST00000489045 UPK1BO75841 260 aa16.29■□□□□ 0.2
COL9A3-213ENST00000489045 CDKN1BP46527 198 aa16.29■□□□□ 0.2
COL9A3-213ENST00000489045 RPL29P47914 159 aaKnown RBP16.29■□□□□ 0.2
COL9A3-213ENST00000489045 SAT2Q96F10 170 aaPredicted RBP16.29■□□□□ 0.2
COL9A3-213ENST00000489045 GPN1Q9HCN4 374 aaPredicted RBP16.29■□□□□ 0.2
COL9A3-213ENST00000489045 SLC39A9Q9NUM3 307 aa16.29■□□□□ 0.2
COL9A3-213ENST00000489045 PRAC2D3DTV9 90 aa16.28■□□□□ 0.2
COL9A3-213ENST00000489045 FGF7P21781 194 aa16.28■□□□□ 0.2
COL9A3-213ENST00000489045 TMEM88Q6PEY1 159 aa16.28■□□□□ 0.2
COL9A3-213ENST00000489045 SIX6O95475 246 aa16.27■□□□□ 0.2
COL9A3-213ENST00000489045 TAS2R60P59551 318 aa16.27■□□□□ 0.2
COL9A3-213ENST00000489045 ATP6V1FQ16864 119 aa16.27■□□□□ 0.2
COL9A3-213ENST00000489045 UBE2DNLQ8IWF7 75 aa16.27■□□□□ 0.2
COL9A3-213ENST00000489045 OR10J6PQ8NGY7 276 aa16.27■□□□□ 0.2
COL9A3-213ENST00000489045 PARD6GQ9BYG4 376 aaPredicted RBP16.27■□□□□ 0.2
COL9A3-213ENST00000489045 DEFB130BP0DP73 79 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms