RNA–Protein interactions for RNA: ENST00000489019.6

CALD1-221, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 422 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-221ENST00000489019 FXYD3Q14802 87 aa2.21□□□□□ -2.06
CALD1-221ENST00000489019 SSX2Q16385 188 aa2.21□□□□□ -2.06
CALD1-221ENST00000489019 Q56UQ5 140 aa2.21□□□□□ -2.06
CALD1-221ENST00000489019 PRR14LQ5THK1 2151 aa2.21□□□□□ -2.06
CALD1-221ENST00000489019 C11orf71Q6IPW1 123 aa2.21□□□□□ -2.06
CALD1-221ENST00000489019 S100A7AQ86SG5 101 aa2.21□□□□□ -2.06
CALD1-221ENST00000489019 LINC01551Q86U37 167 aa2.21□□□□□ -2.06
CALD1-221ENST00000489019 C11orf42Q8N5U0 333 aa2.21□□□□□ -2.06
CALD1-221ENST00000489019 LY6G5BQ8NDX9 201 aa2.21□□□□□ -2.06
CALD1-221ENST00000489019 STXBP6Q8NFX7 210 aa2.21□□□□□ -2.06
CALD1-221ENST00000489019 OR1L6Q8NGR2 347 aa2.21□□□□□ -2.06
CALD1-221ENST00000489019 OR1P1Q8NH06 330 aa2.21□□□□□ -2.06
CALD1-221ENST00000489019 SGMS2Q8NHU3 365 aa2.21□□□□□ -2.06
CALD1-221ENST00000489019 CMTM2Q8TAZ6 248 aa2.21□□□□□ -2.06
CALD1-221ENST00000489019 SRSF12Q8WXF0 261 aaKnown RBP2.21□□□□□ -2.06
CALD1-221ENST00000489019 YPEL4Q96NS1 127 aa2.21□□□□□ -2.06
CALD1-221ENST00000489019 RBM14Q96PK6 669 aaKnown RBP2.21□□□□□ -2.06
CALD1-221ENST00000489019 IMMP2LQ96T52 175 aa2.21□□□□□ -2.06
CALD1-221ENST00000489019 TRGV9Q99603 122 aa2.21□□□□□ -2.06
CALD1-221ENST00000489019 FAM103A1Q9BTL3 118 aaKnown RBP2.21□□□□□ -2.06
CALD1-221ENST00000489019 DERL1Q9BUN8 251 aa2.21□□□□□ -2.06
CALD1-221ENST00000489019 SLC25A2Q9BXI2 301 aa2.21□□□□□ -2.06
CALD1-221ENST00000489019 FNDC4Q9H6D8 234 aaPredicted RBP2.21□□□□□ -2.06
CALD1-221ENST00000489019 NIT2Q9NQR4 276 aa2.21□□□□□ -2.06
CALD1-221ENST00000489019 TNFRSF19Q9NS68 423 aa2.21□□□□□ -2.06
CALD1-221ENST00000489019 ZNF355PQ9NSJ1 428 aa2.21□□□□□ -2.06
CALD1-221ENST00000489019 IL36BQ9NZH7 164 aa2.21□□□□□ -2.06
CALD1-221ENST00000489019 THYN1Q9P016 225 aa2.21□□□□□ -2.06
CALD1-221ENST00000489019 HIGD1AQ9Y241 93 aa2.21□□□□□ -2.06
CALD1-221ENST00000489019 F11RQ9Y624 299 aaKnown RBP2.21□□□□□ -2.06
CALD1-221ENST00000489019 LY96Q9Y6Y9 160 aa2.21□□□□□ -2.06
CALD1-221ENST00000489019 ARL2-SNX15V9GYD0 113 aa2.21□□□□□ -2.06
CALD1-221ENST00000489019 WDFY3Q8IZQ1 3526 aa2.21□□□□□ -2.06
CALD1-221ENST00000489019 VCANP13611 3396 aa2.21□□□□□ -2.06
CALD1-221ENST00000489019 COL6A3P12111 3177 aa2.2□□□□□ -2.06
CALD1-221ENST00000489019 IGKV1D-37A0A075B6S9 117 aa2.2□□□□□ -2.06
CALD1-221ENST00000489019 IGKV1OR2-108A0A075B7D4 117 aa2.2□□□□□ -2.06
CALD1-221ENST00000489019 TRAV30A0A087WSZ9 112 aa2.2□□□□□ -2.06
CALD1-221ENST00000489019 IGKV3D-20A0A0C4DH25 116 aa2.2□□□□□ -2.06
CALD1-221ENST00000489019 IGHV2-70DA0A0C4DH43 119 aa2.2□□□□□ -2.06
CALD1-221ENST00000489019 SERTM2A0A1B0GWG4 89 aa2.2□□□□□ -2.06
CALD1-221ENST00000489019 IGLC7A0M8Q6 106 aa2.2□□□□□ -2.06
CALD1-221ENST00000489019 PGPA6NDG6 321 aa2.2□□□□□ -2.06
CALD1-221ENST00000489019 C9JCJ5 164 aa2.2□□□□□ -2.06
CALD1-221ENST00000489019 LY6LH3BQJ8 138 aa2.2□□□□□ -2.06
CALD1-221ENST00000489019 SLC17A3O00476 420 aa2.2□□□□□ -2.06
CALD1-221ENST00000489019 FCN1O00602 326 aa2.2□□□□□ -2.06
CALD1-221ENST00000489019 PEX7O00628 323 aa2.2□□□□□ -2.06
CALD1-221ENST00000489019 GATCO43716 136 aaKnown RBP2.2□□□□□ -2.06
CALD1-221ENST00000489019 GNG7O60262 68 aa2.2□□□□□ -2.06
CALD1-221ENST00000489019 SPINK4O60575 86 aa2.2□□□□□ -2.06
CALD1-221ENST00000489019 HIST1H2BKO60814 126 aa2.2□□□□□ -2.06
CALD1-221ENST00000489019 GGCTO75223 188 aaKnown RBP2.2□□□□□ -2.06
CALD1-221ENST00000489019 CDK2AP2O75956 126 aa2.2□□□□□ -2.06
CALD1-221ENST00000489019 NDUFA7O95182 113 aa2.2□□□□□ -2.06
CALD1-221ENST00000489019 HIST1H2BJP06899 126 aa2.2□□□□□ -2.06
CALD1-221ENST00000489019 SNRPCP09234 159 aaKnown RBP2.2□□□□□ -2.06
CALD1-221ENST00000489019 SMIM6P0DI80 62 aa2.2□□□□□ -2.06
CALD1-221ENST00000489019 RD3LP0DJH9 198 aa2.2□□□□□ -2.06
CALD1-221ENST00000489019 HIST1H2BOP23527 126 aa2.2□□□□□ -2.06
CALD1-221ENST00000489019 PRTN3P24158 256 aa2.2□□□□□ -2.06
CALD1-221ENST00000489019 CD24P25063 80 aa2.2□□□□□ -2.06
CALD1-221ENST00000489019 S100A7P31151 101 aa2.2□□□□□ -2.06
CALD1-221ENST00000489019 BRS3P32247 399 aa2.2□□□□□ -2.06
CALD1-221ENST00000489019 HIST1H2BBP33778 126 aa2.2□□□□□ -2.06
CALD1-221ENST00000489019 ID1P41134 155 aa2.2□□□□□ -2.06
CALD1-221ENST00000489019 HIST1H2BDP58876 126 aa2.2□□□□□ -2.06
CALD1-221ENST00000489019 TAS2R60P59551 318 aa2.2□□□□□ -2.06
CALD1-221ENST00000489019 HIST1H2BCP62807 126 aa2.2□□□□□ -2.06
CALD1-221ENST00000489019 RANP62826 216 aaKnown RBP2.2□□□□□ -2.06
CALD1-221ENST00000489019 GNG5P63218 68 aa2.2□□□□□ -2.06
CALD1-221ENST00000489019 OR5I1Q13606 314 aa2.2□□□□□ -2.06
CALD1-221ENST00000489019 HIST2H2BEQ16778 126 aa2.2□□□□□ -2.06
CALD1-221ENST00000489019 COX19Q49B96 90 aa2.2□□□□□ -2.06
CALD1-221ENST00000489019 CENPWQ5EE01 88 aa2.2□□□□□ -2.06
CALD1-221ENST00000489019 ACTL10Q5JWF8 245 aa2.2□□□□□ -2.06
CALD1-221ENST00000489019 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.2□□□□□ -2.06
CALD1-221ENST00000489019 IBA57Q5T440 356 aaKnown RBP2.2□□□□□ -2.06
CALD1-221ENST00000489019 MINOS1Q5TGZ0 78 aa2.2□□□□□ -2.06
CALD1-221ENST00000489019 PATE2Q6UY27 113 aa2.2□□□□□ -2.06
CALD1-221ENST00000489019 C19orf35Q6ZS72 473 aa2.2□□□□□ -2.06
CALD1-221ENST00000489019 BAGE2Q86Y30 109 aa2.2□□□□□ -2.06
CALD1-221ENST00000489019 TMEM183AQ8IXX5 376 aa2.2□□□□□ -2.06
CALD1-221ENST00000489019 KIR3DL3Q8N743 410 aa2.2□□□□□ -2.06
CALD1-221ENST00000489019 NPBQ8NG41 125 aa2.2□□□□□ -2.06
CALD1-221ENST00000489019 OR4F17Q8NGA8 305 aa2.2□□□□□ -2.06
CALD1-221ENST00000489019 OR11H6Q8NGC7 330 aa2.2□□□□□ -2.06
CALD1-221ENST00000489019 OR10D4PQ8NGN7 298 aa2.2□□□□□ -2.06
CALD1-221ENST00000489019 ITLN2Q8WWU7 325 aaPredicted RBP2.2□□□□□ -2.06
CALD1-221ENST00000489019 ARPC1AQ92747 370 aa2.2□□□□□ -2.06
CALD1-221ENST00000489019 HIST1H2BHQ93079 126 aa2.2□□□□□ -2.06
CALD1-221ENST00000489019 C11orf52Q96A22 123 aa2.2□□□□□ -2.06
CALD1-221ENST00000489019 LINC00479Q96M42 142 aa2.2□□□□□ -2.06
CALD1-221ENST00000489019 CCL19Q99731 98 aa2.2□□□□□ -2.06
CALD1-221ENST00000489019 HIST1H2BNQ99877 126 aa2.2□□□□□ -2.06
CALD1-221ENST00000489019 HIST1H2BMQ99879 126 aa2.2□□□□□ -2.06
CALD1-221ENST00000489019 CHRDL1Q9BU40 450 aa2.2□□□□□ -2.06
CALD1-221ENST00000489019 LPAR2Q9HBW0 351 aa2.2□□□□□ -2.06
CALD1-221ENST00000489019 PITPNC1Q9UKF7 332 aa2.2□□□□□ -2.06
CALD1-221ENST00000489019 TBL2Q9Y4P3 447 aaKnown RBP2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms