RNA–Protein interactions for RNA: ENST00000488801.5

PTCD3-217, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-217ENST00000488801 WWC2-AS2Q96NR7 200 aa13.65□□□□□ -0.22
PTCD3-217ENST00000488801 SLC25A2Q9BXI2 301 aa13.65□□□□□ -0.22
PTCD3-217ENST00000488801 ZNF331Q9NQX6 463 aaPredicted RBP13.65□□□□□ -0.22
PTCD3-217ENST00000488801 RFNGQ9Y644 331 aa13.65□□□□□ -0.22
PTCD3-217ENST00000488801 CSMD3Q7Z407 3707 aa13.65□□□□□ -0.22
PTCD3-217ENST00000488801 A0A0J9YX75 114 aa13.64□□□□□ -0.23
PTCD3-217ENST00000488801 SMLR1H3BR10 107 aa13.64□□□□□ -0.23
PTCD3-217ENST00000488801 SLC17A3O00476 420 aa13.64□□□□□ -0.23
PTCD3-217ENST00000488801 FAM78BQ5VT40 261 aa13.64□□□□□ -0.23
PTCD3-217ENST00000488801 MORN3Q6PF18 240 aaPredicted RBP13.64□□□□□ -0.23
PTCD3-217ENST00000488801 OR2G3Q8NGZ4 309 aa13.64□□□□□ -0.23
PTCD3-217ENST00000488801 LINC00052Q96N35 136 aa13.64□□□□□ -0.23
PTCD3-217ENST00000488801 SLC50A1Q9BRV3 221 aa13.64□□□□□ -0.23
PTCD3-217ENST00000488801 PSMG3Q9BT73 122 aaPredicted RBP13.64□□□□□ -0.23
PTCD3-217ENST00000488801 RPRMQ9NS64 109 aa13.64□□□□□ -0.23
PTCD3-217ENST00000488801 ZNF253O75346 499 aa13.63□□□□□ -0.23
PTCD3-217ENST00000488801 ZNF345Q14585 488 aa13.63□□□□□ -0.23
PTCD3-217ENST00000488801 FFAR4Q5NUL3 377 aa13.63□□□□□ -0.23
PTCD3-217ENST00000488801 IGFL4Q6B9Z1 124 aa13.63□□□□□ -0.23
PTCD3-217ENST00000488801 MIR17HGQ75NE6 70 aa13.63□□□□□ -0.23
PTCD3-217ENST00000488801 RNF182Q8N6D2 247 aa13.63□□□□□ -0.23
PTCD3-217ENST00000488801 OR11H4Q8NGC9 324 aa13.63□□□□□ -0.23
PTCD3-217ENST00000488801 ST6GAL2Q96JF0 529 aa13.63□□□□□ -0.23
PTCD3-217ENST00000488801 ZNF586Q9NXT0 402 aa13.63□□□□□ -0.23
PTCD3-217ENST00000488801 FUT9Q9Y231 359 aa13.63□□□□□ -0.23
PTCD3-217ENST00000488801 F6UB75 175 aa13.62□□□□□ -0.23
PTCD3-217ENST00000488801 CA1P00915 261 aaPredicted RBP13.62□□□□□ -0.23
PTCD3-217ENST00000488801 GUK1Q16774 197 aa13.62□□□□□ -0.23
PTCD3-217ENST00000488801 TMEM41BQ5BJD5 291 aa13.62□□□□□ -0.23
PTCD3-217ENST00000488801 HMSDA8MTL9 139 aa13.61□□□□□ -0.23
PTCD3-217ENST00000488801 ARPC5O15511 151 aa13.61□□□□□ -0.23
PTCD3-217ENST00000488801 SPRY2O43597 315 aa13.61□□□□□ -0.23
PTCD3-217ENST00000488801 PYYP10082 97 aa13.61□□□□□ -0.23
PTCD3-217ENST00000488801 ATP6V0CP27449 155 aa13.61□□□□□ -0.23
PTCD3-217ENST00000488801 HLA-DMBP28068 263 aa13.61□□□□□ -0.23
PTCD3-217ENST00000488801 PDE6HQ13956 83 aa13.61□□□□□ -0.23
PTCD3-217ENST00000488801 PSG3Q16557 428 aa13.61□□□□□ -0.23
PTCD3-217ENST00000488801 RPL7L1Q6DKI1 246 aaKnown RBP13.61□□□□□ -0.23
PTCD3-217ENST00000488801 CSNK1G2-AS1Q8NCQ2 148 aa13.61□□□□□ -0.23
PTCD3-217ENST00000488801 ZNF503Q96F45 646 aa13.61□□□□□ -0.23
PTCD3-217ENST00000488801 TRBV19A0A075B6N1 114 aa13.6□□□□□ -0.23
PTCD3-217ENST00000488801 NDUFB4O95168 129 aa13.6□□□□□ -0.23
PTCD3-217ENST00000488801 HIST1H1EP10412 219 aaKnown RBP13.6□□□□□ -0.23
PTCD3-217ENST00000488801 M6PRP20645 277 aa13.6□□□□□ -0.23
PTCD3-217ENST00000488801 AMTNQ6UX39 209 aa13.6□□□□□ -0.23
PTCD3-217ENST00000488801 HSD17B11Q8NBQ5 300 aa13.6□□□□□ -0.23
PTCD3-217ENST00000488801 CYTL1Q9NRR1 136 aa13.6□□□□□ -0.23
PTCD3-217ENST00000488801 H3BTX0 84 aa13.59□□□□□ -0.23
PTCD3-217ENST00000488801 SNRPCP09234 159 aaKnown RBP13.59□□□□□ -0.23
PTCD3-217ENST00000488801 RHOBP62745 196 aa13.59□□□□□ -0.23
PTCD3-217ENST00000488801 FXYD5Q96DB9 178 aa13.59□□□□□ -0.23
PTCD3-217ENST00000488801 MFFQ9GZY8 342 aa13.59□□□□□ -0.23
PTCD3-217ENST00000488801 CLEC5AQ9NY25 188 aa13.59□□□□□ -0.23
PTCD3-217ENST00000488801 TAAR5O14804 337 aa13.58□□□□□ -0.24
PTCD3-217ENST00000488801 RAB2AP61019 212 aa13.58□□□□□ -0.24
PTCD3-217ENST00000488801 SERF2P84101 59 aa13.58□□□□□ -0.24
PTCD3-217ENST00000488801 ACOT6Q3I5F7 207 aaPredicted RBP13.58□□□□□ -0.24
PTCD3-217ENST00000488801 EBLN2Q6P2I7 272 aa13.58□□□□□ -0.24
PTCD3-217ENST00000488801 TCTE3Q8IZS6 198 aa13.58□□□□□ -0.24
PTCD3-217ENST00000488801 KCNRGQ8N5I3 272 aa13.58□□□□□ -0.24
PTCD3-217ENST00000488801 SH3BGRL3Q9H299 93 aa13.58□□□□□ -0.24
PTCD3-217ENST00000488801 ZNF705EA8MWA4 302 aaPredicted RBP13.57□□□□□ -0.24
PTCD3-217ENST00000488801 ZNF738Q8NE65 137 aa13.57□□□□□ -0.24
PTCD3-217ENST00000488801 OR8A1Q8NGG7 326 aa13.57□□□□□ -0.24
PTCD3-217ENST00000488801 MRPL53Q96EL3 112 aaKnown RBP13.57□□□□□ -0.24
PTCD3-217ENST00000488801 OR51M1Q9H341 326 aa13.57□□□□□ -0.24
PTCD3-217ENST00000488801 STARD9Q9P2P6 4700 aa13.57□□□□□ -0.24
PTCD3-217ENST00000488801 BORCS7-ASMTA0A0B4J1R7 106 aa13.56□□□□□ -0.24
PTCD3-217ENST00000488801 CNN1P51911 297 aaKnown RBP13.56□□□□□ -0.24
PTCD3-217ENST00000488801 NUTF2P61970 127 aaKnown RBP13.56□□□□□ -0.24
PTCD3-217ENST00000488801 KHDC3LQ587J8 217 aa13.56□□□□□ -0.24
PTCD3-217ENST00000488801 LRRC20Q8TCA0 184 aa13.56□□□□□ -0.24
PTCD3-217ENST00000488801 RPUSD4Q96CM3 377 aaKnown RBP13.56□□□□□ -0.24
PTCD3-217ENST00000488801 PAXXQ9BUH6 204 aa13.56□□□□□ -0.24
PTCD3-217ENST00000488801 C1QTNF4Q9BXJ3 329 aa13.56□□□□□ -0.24
PTCD3-217ENST00000488801 JTBO76095 146 aa13.55□□□□□ -0.24
PTCD3-217ENST00000488801 PSG9Q00887 426 aa13.55□□□□□ -0.24
PTCD3-217ENST00000488801 RPP25LQ8N5L8 163 aaKnown RBP13.55□□□□□ -0.24
PTCD3-217ENST00000488801 GNPNAT1Q96EK6 184 aaPredicted RBP13.55□□□□□ -0.24
PTCD3-217ENST00000488801 SLC35B3Q9H1N7 401 aa13.55□□□□□ -0.24
PTCD3-217ENST00000488801 ZNF705FA8MVS1 300 aaPredicted RBP13.54□□□□□ -0.24
PTCD3-217ENST00000488801 PRAC2D3DTV9 90 aa13.54□□□□□ -0.24
PTCD3-217ENST00000488801 DUSP14O95147 198 aaKnown RBP13.54□□□□□ -0.24
PTCD3-217ENST00000488801 NBEAP1P0C6P0 100 aa13.54□□□□□ -0.24
PTCD3-217ENST00000488801 TAS2R45P59539 299 aa13.54□□□□□ -0.24
PTCD3-217ENST00000488801 OR4B1Q8NGF8 309 aa13.54□□□□□ -0.24
PTCD3-217ENST00000488801 OR10G4Q8NGN3 311 aa13.54□□□□□ -0.24
PTCD3-217ENST00000488801 OR10G9Q8NGN4 311 aa13.54□□□□□ -0.24
PTCD3-217ENST00000488801 OR10G7Q8NGN6 311 aa13.54□□□□□ -0.24
PTCD3-217ENST00000488801 RNF141Q8WVD5 230 aa13.54□□□□□ -0.24
PTCD3-217ENST00000488801 PHYHIPLQ96FC7 376 aa13.54□□□□□ -0.24
PTCD3-217ENST00000488801 C11orf68Q9H3H3 251 aaKnown RBP13.54□□□□□ -0.24
PTCD3-217ENST00000488801 X6R8D5 127 aa13.54□□□□□ -0.24
PTCD3-217ENST00000488801 OR7C2O60412 319 aa13.53□□□□□ -0.24
PTCD3-217ENST00000488801 IGKV3-20P01619 116 aa13.53□□□□□ -0.24
PTCD3-217ENST00000488801 OR10J4P0C629 311 aa13.53□□□□□ -0.24
PTCD3-217ENST00000488801 ZNF705DP0CH99 300 aaPredicted RBP13.53□□□□□ -0.24
PTCD3-217ENST00000488801 ZNF705BP0CI00 300 aaPredicted RBP13.53□□□□□ -0.24
PTCD3-217ENST00000488801 ZNF705AQ6ZN79 300 aaPredicted RBP13.53□□□□□ -0.24
PTCD3-217ENST00000488801 PQLC2Q6ZP29 291 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms