RNA–Protein interactions for RNA: ENST00000488591.1

CXCL12-207, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 2

Gene CXCL12, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-207ENST00000488591 SLC50A1Q9BRV3 221 aa11.02□□□□□ -0.65
CXCL12-207ENST00000488591 TRAV8-2A0A0B4J237 113 aa11.01□□□□□ -0.65
CXCL12-207ENST00000488591 A0A0J9YX75 114 aa11.01□□□□□ -0.65
CXCL12-207ENST00000488591 DUSP14O95147 198 aaKnown RBP11.01□□□□□ -0.65
CXCL12-207ENST00000488591 IGKV3-20P01619 116 aa11.01□□□□□ -0.65
CXCL12-207ENST00000488591 DEFB1P60022 68 aa11.01□□□□□ -0.65
CXCL12-207ENST00000488591 ZNF266Q14584 549 aa11.01□□□□□ -0.65
CXCL12-207ENST00000488591 GDF5OSQ5U4N7 250 aa11.01□□□□□ -0.65
CXCL12-207ENST00000488591 RNF182Q8N6D2 247 aa11.01□□□□□ -0.65
CXCL12-207ENST00000488591 ZNF738Q8NE65 137 aa11.01□□□□□ -0.65
CXCL12-207ENST00000488591 OR11H2Q8NH07 326 aa11.01□□□□□ -0.65
CXCL12-207ENST00000488591 HRH4Q9H3N8 390 aa11.01□□□□□ -0.65
CXCL12-207ENST00000488591 CLEC5AQ9NY25 188 aa11.01□□□□□ -0.65
CXCL12-207ENST00000488591 FXYD6-FXYD2A0A087WZ82 144 aa11□□□□□ -0.65
CXCL12-207ENST00000488591 F6UB75 175 aa11□□□□□ -0.65
CXCL12-207ENST00000488591 IGLC2P0DOY2 106 aa11□□□□□ -0.65
CXCL12-207ENST00000488591 C4BPBP20851 252 aa11□□□□□ -0.65
CXCL12-207ENST00000488591 PSG9Q00887 426 aa11□□□□□ -0.65
CXCL12-207ENST00000488591 PSG3Q16557 428 aa11□□□□□ -0.65
CXCL12-207ENST00000488591 Q5BKY6 102 aa11□□□□□ -0.65
CXCL12-207ENST00000488591 GCSAMLQ5JQS6 135 aa11□□□□□ -0.65
CXCL12-207ENST00000488591 FFAR4Q5NUL3 377 aa11□□□□□ -0.65
CXCL12-207ENST00000488591 MRPL32Q9BYC8 188 aaKnown RBP11□□□□□ -0.65
CXCL12-207ENST00000488591 WFDC1Q9HC57 220 aa11□□□□□ -0.65
CXCL12-207ENST00000488591 ZNF331Q9NQX6 463 aaPredicted RBP11□□□□□ -0.65
CXCL12-207ENST00000488591 TMEM14CQ9P0S9 112 aa11□□□□□ -0.65
CXCL12-207ENST00000488591 HUWE1Q7Z6Z7 4374 aaKnown RBP11□□□□□ -0.65
CXCL12-207ENST00000488591 A0A0J9YWU9 116 aa10.99□□□□□ -0.65
CXCL12-207ENST00000488591 SNRPCP09234 159 aaKnown RBP10.99□□□□□ -0.65
CXCL12-207ENST00000488591 GIG44P09565 113 aaPredicted RBP10.99□□□□□ -0.65
CXCL12-207ENST00000488591 XCL2Q9UBD3 114 aa10.99□□□□□ -0.65
CXCL12-207ENST00000488591 H3BQ15 152 aa10.98□□□□□ -0.65
CXCL12-207ENST00000488591 H3BTX0 84 aa10.98□□□□□ -0.65
CXCL12-207ENST00000488591 HIST1H1EP10412 219 aaKnown RBP10.98□□□□□ -0.65
CXCL12-207ENST00000488591 PPP1R14DQ9NXH3 145 aa10.98□□□□□ -0.65
CXCL12-207ENST00000488591 FUT9Q9Y231 359 aa10.98□□□□□ -0.65
CXCL12-207ENST00000488591 TIMM9Q9Y5J7 89 aa10.98□□□□□ -0.65
CXCL12-207ENST00000488591 ZNF253O75346 499 aa10.97□□□□□ -0.65
CXCL12-207ENST00000488591 HLA-DMBP28068 263 aa10.97□□□□□ -0.65
CXCL12-207ENST00000488591 CNN1P51911 297 aaKnown RBP10.97□□□□□ -0.65
CXCL12-207ENST00000488591 FXYD7P58549 80 aa10.97□□□□□ -0.65
CXCL12-207ENST00000488591 RHOBP62745 196 aa10.97□□□□□ -0.65
CXCL12-207ENST00000488591 ACOT6Q3I5F7 207 aaPredicted RBP10.97□□□□□ -0.65
CXCL12-207ENST00000488591 MIR17HGQ75NE6 70 aa10.97□□□□□ -0.65
CXCL12-207ENST00000488591 CSNK1G2-AS1Q8NCQ2 148 aa10.97□□□□□ -0.65
CXCL12-207ENST00000488591 RPUSD4Q96CM3 377 aaKnown RBP10.97□□□□□ -0.65
CXCL12-207ENST00000488591 MFFQ9GZY8 342 aa10.97□□□□□ -0.65
CXCL12-207ENST00000488591 OR51M1Q9H341 326 aa10.97□□□□□ -0.65
CXCL12-207ENST00000488591 ZNF586Q9NXT0 402 aa10.97□□□□□ -0.65
CXCL12-207ENST00000488591 TNFSF18Q9UNG2 199 aa10.97□□□□□ -0.65
CXCL12-207ENST00000488591 TRBV19A0A075B6N1 114 aa10.96□□□□□ -0.65
CXCL12-207ENST00000488591 BORCS7-ASMTA0A0B4J1R7 106 aa10.96□□□□□ -0.65
CXCL12-207ENST00000488591 SLC17A3O00476 420 aa10.96□□□□□ -0.65
CXCL12-207ENST00000488591 PYYP10082 97 aa10.96□□□□□ -0.65
CXCL12-207ENST00000488591 TAS2R45P59539 299 aa10.96□□□□□ -0.65
CXCL12-207ENST00000488591 HIST1H1AQ02539 215 aaPredicted RBP10.96□□□□□ -0.65
CXCL12-207ENST00000488591 OR8A1Q8NGG7 326 aa10.96□□□□□ -0.65
CXCL12-207ENST00000488591 SAT2Q96F10 170 aaPredicted RBP10.96□□□□□ -0.65
CXCL12-207ENST00000488591 SLC25A2Q9BXI2 301 aa10.96□□□□□ -0.65
CXCL12-207ENST00000488591 A0A1W2PPV4 95 aa10.95□□□□□ -0.66
CXCL12-207ENST00000488591 A8MTW9 85 aa10.95□□□□□ -0.66
CXCL12-207ENST00000488591 ZNF705EA8MWA4 302 aaPredicted RBP10.95□□□□□ -0.66
CXCL12-207ENST00000488591 AMBPP02760 352 aa10.95□□□□□ -0.66
CXCL12-207ENST00000488591 ZNF705DP0CH99 300 aaPredicted RBP10.95□□□□□ -0.66
CXCL12-207ENST00000488591 ZNF705BP0CI00 300 aaPredicted RBP10.95□□□□□ -0.66
CXCL12-207ENST00000488591 MIFP14174 115 aa10.95□□□□□ -0.66
CXCL12-207ENST00000488591 M6PRP20645 277 aa10.95□□□□□ -0.66
CXCL12-207ENST00000488591 PDE6HQ13956 83 aa10.95□□□□□ -0.66
CXCL12-207ENST00000488591 CASC10Q5T4H9 136 aa10.95□□□□□ -0.66
CXCL12-207ENST00000488591 ZFAND6Q6FIF0 208 aa10.95□□□□□ -0.66
CXCL12-207ENST00000488591 HSD17B11Q8NBQ5 300 aa10.95□□□□□ -0.66
CXCL12-207ENST00000488591 OR10J6PQ8NGY7 276 aa10.95□□□□□ -0.66
CXCL12-207ENST00000488591 BLNKQ8WV28 456 aa10.95□□□□□ -0.66
CXCL12-207ENST00000488591 FAM167A-AS1Q96KT0 104 aa10.95□□□□□ -0.66
CXCL12-207ENST00000488591 PAXXQ9BUH6 204 aa10.95□□□□□ -0.66
CXCL12-207ENST00000488591 SLC35B3Q9H1N7 401 aa10.95□□□□□ -0.66
CXCL12-207ENST00000488591 C11orf68Q9H3H3 251 aaKnown RBP10.95□□□□□ -0.66
CXCL12-207ENST00000488591 AAMDCQ9H7C9 122 aa10.95□□□□□ -0.66
CXCL12-207ENST00000488591 PRELID1Q9Y255 219 aa10.95□□□□□ -0.66
CXCL12-207ENST00000488591 RNF222A6NCQ9 220 aa10.94□□□□□ -0.66
CXCL12-207ENST00000488591 ZNF705FA8MVS1 300 aaPredicted RBP10.94□□□□□ -0.66
CXCL12-207ENST00000488591 OR7C2O60412 319 aa10.94□□□□□ -0.66
CXCL12-207ENST00000488591 NBEAP1P0C6P0 100 aa10.94□□□□□ -0.66
CXCL12-207ENST00000488591 KHDC3LQ587J8 217 aa10.94□□□□□ -0.66
CXCL12-207ENST00000488591 PSMG3Q9BT73 122 aaPredicted RBP10.94□□□□□ -0.66
CXCL12-207ENST00000488591 GOLT1BQ9Y3E0 138 aa10.94□□□□□ -0.66
CXCL12-207ENST00000488591 TAAR5O14804 337 aa10.93□□□□□ -0.66
CXCL12-207ENST00000488591 ARPC5O15511 151 aa10.93□□□□□ -0.66
CXCL12-207ENST00000488591 SERF2P84101 59 aa10.93□□□□□ -0.66
CXCL12-207ENST00000488591 AMTNQ6UX39 209 aa10.93□□□□□ -0.66
CXCL12-207ENST00000488591 OR10G4Q8NGN3 311 aa10.93□□□□□ -0.66
CXCL12-207ENST00000488591 OR10G9Q8NGN4 311 aa10.93□□□□□ -0.66
CXCL12-207ENST00000488591 OR10G7Q8NGN6 311 aa10.93□□□□□ -0.66
CXCL12-207ENST00000488591 RNF141Q8WVD5 230 aa10.93□□□□□ -0.66
CXCL12-207ENST00000488591 GNPNAT1Q96EK6 184 aaPredicted RBP10.93□□□□□ -0.66
CXCL12-207ENST00000488591 MRPL53Q96EL3 112 aaKnown RBP10.93□□□□□ -0.66
CXCL12-207ENST00000488591 RFNGQ9Y644 331 aa10.93□□□□□ -0.66
CXCL12-207ENST00000488591 IGHV3OR16-12A0A075B7B8 117 aa10.92□□□□□ -0.66
CXCL12-207ENST00000488591 SMIM9A6NGZ8 99 aa10.92□□□□□ -0.66
CXCL12-207ENST00000488591 G3V3Q6 166 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms