RNA–Protein interactions for RNA: ENST00000486704.1

HDAC8-218, Transcript of histone deacetylase 8, humanhuman

TSL 2

Gene HDAC8, Length 330 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-218ENST00000486704 OR5AC2Q9NZP5 309 aa11.54□□□□□ -0.56
HDAC8-218ENST00000486704 KLK5Q9Y337 293 aaPredicted RBP11.54□□□□□ -0.56
HDAC8-218ENST00000486704 PLECQ15149 4684 aaKnown RBP11.53□□□□□ -0.56
HDAC8-218ENST00000486704 H0YIZ8 118 aa11.53□□□□□ -0.56
HDAC8-218ENST00000486704 SSNA1O43805 119 aa11.53□□□□□ -0.56
HDAC8-218ENST00000486704 PTTG1O95997 202 aa11.53□□□□□ -0.56
HDAC8-218ENST00000486704 PET100P0DJ07 73 aa11.53□□□□□ -0.56
HDAC8-218ENST00000486704 CXCL3P19876 107 aa11.53□□□□□ -0.56
HDAC8-218ENST00000486704 FGL1Q08830 312 aa11.53□□□□□ -0.56
HDAC8-218ENST00000486704 MORN5Q5VZ52 161 aa11.53□□□□□ -0.56
HDAC8-218ENST00000486704 AMTNQ6UX39 209 aa11.53□□□□□ -0.56
HDAC8-218ENST00000486704 RNF182Q8N6D2 247 aa11.53□□□□□ -0.56
HDAC8-218ENST00000486704 OR1L4Q8NGR5 311 aa11.53□□□□□ -0.56
HDAC8-218ENST00000486704 PPP1R1CQ8WVI7 109 aa11.53□□□□□ -0.56
HDAC8-218ENST00000486704 SLC35B3Q9H1N7 401 aa11.53□□□□□ -0.56
HDAC8-218ENST00000486704 DNAJC4Q9NNZ3 241 aa11.53□□□□□ -0.56
HDAC8-218ENST00000486704 SLC39A9Q9NUM3 307 aa11.53□□□□□ -0.56
HDAC8-218ENST00000486704 DUSP14O95147 198 aaKnown RBP11.52□□□□□ -0.57
HDAC8-218ENST00000486704 FGF7P21781 194 aa11.52□□□□□ -0.57
HDAC8-218ENST00000486704 NANOS2P60321 138 aaKnown RBP11.52□□□□□ -0.57
HDAC8-218ENST00000486704 B2MP61769 119 aa11.52□□□□□ -0.57
HDAC8-218ENST00000486704 NHLH2Q02577 135 aa11.52□□□□□ -0.57
HDAC8-218ENST00000486704 IGFL4Q6B9Z1 124 aa11.52□□□□□ -0.57
HDAC8-218ENST00000486704 OR5C1Q8NGR4 320 aa11.52□□□□□ -0.57
HDAC8-218ENST00000486704 SLC50A1Q9BRV3 221 aa11.52□□□□□ -0.57
HDAC8-218ENST00000486704 NPCDR1Q9BY65 106 aa11.52□□□□□ -0.57
HDAC8-218ENST00000486704 DNAH1Q9P2D7 4330 aa11.52□□□□□ -0.57
HDAC8-218ENST00000486704 SMIM9A6NGZ8 99 aa11.51□□□□□ -0.57
HDAC8-218ENST00000486704 AMBPP02760 352 aa11.51□□□□□ -0.57
HDAC8-218ENST00000486704 IGLC2P0DOY2 106 aa11.51□□□□□ -0.57
HDAC8-218ENST00000486704 CNN1P51911 297 aaKnown RBP11.51□□□□□ -0.57
HDAC8-218ENST00000486704 FXYD7P58549 80 aa11.51□□□□□ -0.57
HDAC8-218ENST00000486704 ZNF738Q8NE65 137 aa11.51□□□□□ -0.57
HDAC8-218ENST00000486704 ZNF331Q9NQX6 463 aaPredicted RBP11.51□□□□□ -0.57
HDAC8-218ENST00000486704 PXMP4Q9Y6I8 212 aa11.51□□□□□ -0.57
HDAC8-218ENST00000486704 MPC2O95563 127 aa11.5□□□□□ -0.57
HDAC8-218ENST00000486704 PSG3Q16557 428 aa11.5□□□□□ -0.57
HDAC8-218ENST00000486704 OR11H7Q8NGC8 314 aa11.5□□□□□ -0.57
HDAC8-218ENST00000486704 LRRC20Q8TCA0 184 aa11.5□□□□□ -0.57
HDAC8-218ENST00000486704 LINC00476Q8WZB0 136 aa11.5□□□□□ -0.57
HDAC8-218ENST00000486704 TMEM189A5PLL7 270 aa11.49□□□□□ -0.57
HDAC8-218ENST00000486704 C11orf94C9JXX5 98 aa11.49□□□□□ -0.57
HDAC8-218ENST00000486704 HLA-DMBP28068 263 aa11.49□□□□□ -0.57
HDAC8-218ENST00000486704 GUK1Q16774 197 aa11.49□□□□□ -0.57
HDAC8-218ENST00000486704 OR8A1Q8NGG7 326 aa11.49□□□□□ -0.57
HDAC8-218ENST00000486704 IGF2BP2-AS1Q96M15 143 aa11.49□□□□□ -0.57
HDAC8-218ENST00000486704 RNF126Q9BV68 326 aa11.49□□□□□ -0.57
HDAC8-218ENST00000486704 KCNIP2Q9NS61 270 aa11.49□□□□□ -0.57
HDAC8-218ENST00000486704 GOLT1BQ9Y3E0 138 aa11.49□□□□□ -0.57
HDAC8-218ENST00000486704 ZNF253O75346 499 aa11.48□□□□□ -0.57
HDAC8-218ENST00000486704 CLINT1Q14677 625 aa11.48□□□□□ -0.57
HDAC8-218ENST00000486704 C1orf158Q8N1D5 194 aa11.48□□□□□ -0.57
HDAC8-218ENST00000486704 THAP6Q8TBB0 222 aa11.48□□□□□ -0.57
HDAC8-218ENST00000486704 SAT2Q96F10 170 aaPredicted RBP11.48□□□□□ -0.57
HDAC8-218ENST00000486704 WDR61Q9GZS3 305 aaKnown RBP11.48□□□□□ -0.57
HDAC8-218ENST00000486704 RFNGQ9Y644 331 aa11.48□□□□□ -0.57
HDAC8-218ENST00000486704 ALG5Q9Y673 324 aa11.48□□□□□ -0.57
HDAC8-218ENST00000486704 HYDINQ4G0P3 5121 aa11.48□□□□□ -0.57
HDAC8-218ENST00000486704 H3BQ15 152 aa11.47□□□□□ -0.57
HDAC8-218ENST00000486704 BOLA2-SMG1P6H3BVE0 249 aa11.47□□□□□ -0.57
HDAC8-218ENST00000486704 SLC17A3O00476 420 aa11.47□□□□□ -0.57
HDAC8-218ENST00000486704 RPUSD4Q96CM3 377 aaKnown RBP11.47□□□□□ -0.57
HDAC8-218ENST00000486704 ATP5SQ99766 215 aa11.47□□□□□ -0.57
HDAC8-218ENST00000486704 TMEM14CQ9P0S9 112 aa11.47□□□□□ -0.57
HDAC8-218ENST00000486704 CELA1Q9UNI1 258 aa11.47□□□□□ -0.57
HDAC8-218ENST00000486704 HSPB11Q9Y547 144 aa11.47□□□□□ -0.57
HDAC8-218ENST00000486704 TRAV5A0A0B4J249 113 aa11.46□□□□□ -0.57
HDAC8-218ENST00000486704 CRXO43186 299 aaPredicted RBP11.46□□□□□ -0.57
HDAC8-218ENST00000486704 INSP01308 110 aa11.46□□□□□ -0.57
HDAC8-218ENST00000486704 TCTAP57738 103 aa11.46□□□□□ -0.57
HDAC8-218ENST00000486704 HIST1H1AQ02539 215 aaPredicted RBP11.46□□□□□ -0.57
HDAC8-218ENST00000486704 SPINK13Q1W4C9 94 aa11.46□□□□□ -0.57
HDAC8-218ENST00000486704 C2CD4CQ8TF44 421 aa11.46□□□□□ -0.57
HDAC8-218ENST00000486704 MBD2Q9UBB5 411 aa11.46□□□□□ -0.57
HDAC8-218ENST00000486704 IGHV3OR16-12A0A075B7B8 117 aa11.45□□□□□ -0.58
HDAC8-218ENST00000486704 TRAV10A0A0B4J240 114 aa11.45□□□□□ -0.58
HDAC8-218ENST00000486704 TEX48A0A1B0GUV7 120 aa11.45□□□□□ -0.58
HDAC8-218ENST00000486704 M0R2Z0 102 aa11.45□□□□□ -0.58
HDAC8-218ENST00000486704 HBE1P02100 147 aa11.45□□□□□ -0.58
HDAC8-218ENST00000486704 RPL12P30050 165 aaKnown RBP11.45□□□□□ -0.58
HDAC8-218ENST00000486704 Q6ZTC4 211 aa11.45□□□□□ -0.58
HDAC8-218ENST00000486704 ZNF586Q9NXT0 402 aa11.45□□□□□ -0.58
HDAC8-218ENST00000486704 C17orf112F2Z3M2 114 aa11.44□□□□□ -0.58
HDAC8-218ENST00000486704 H3BTX0 84 aa11.44□□□□□ -0.58
HDAC8-218ENST00000486704 SNRPCP09234 159 aaKnown RBP11.44□□□□□ -0.58
HDAC8-218ENST00000486704 PDE6HQ13956 83 aa11.44□□□□□ -0.58
HDAC8-218ENST00000486704 GCSAMLQ5JQS6 135 aa11.44□□□□□ -0.58
HDAC8-218ENST00000486704 MRPL53Q96EL3 112 aaKnown RBP11.44□□□□□ -0.58
HDAC8-218ENST00000486704 MRPL32Q9BYC8 188 aaKnown RBP11.44□□□□□ -0.58
HDAC8-218ENST00000486704 PARD6GQ9BYG4 376 aaPredicted RBP11.44□□□□□ -0.58
HDAC8-218ENST00000486704 TRBV19A0A075B6N1 114 aa11.43□□□□□ -0.58
HDAC8-218ENST00000486704 HIST1H1EP10412 219 aaKnown RBP11.43□□□□□ -0.58
HDAC8-218ENST00000486704 RHOBP62745 196 aa11.43□□□□□ -0.58
HDAC8-218ENST00000486704 RRN3P1Q2M238 152 aa11.43□□□□□ -0.58
HDAC8-218ENST00000486704 C12orf74Q32Q52 190 aa11.43□□□□□ -0.58
HDAC8-218ENST00000486704 BAP18Q8IXM2 172 aa11.43□□□□□ -0.58
HDAC8-218ENST00000486704 TMEM208Q9BTX3 173 aa11.43□□□□□ -0.58
HDAC8-218ENST00000486704 LOC102723971A0A1B0GUV8 181 aa11.42□□□□□ -0.58
HDAC8-218ENST00000486704 LY6G6CO95867 125 aa11.42□□□□□ -0.58
HDAC8-218ENST00000486704 SPART-AS1P0CW21 52 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms