RNA–Protein interactions for RNA: ENST00000485871.1

SND1-212, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-212ENST00000485871 IL4P05112 153 aa8.66□□□□□ -1.02
SND1-212ENST00000485871 S100A7P31151 101 aa8.66□□□□□ -1.02
SND1-212ENST00000485871 LYZP61626 148 aa8.66□□□□□ -1.02
SND1-212ENST00000485871 UBE2L3P68036 154 aaKnown RBP8.66□□□□□ -1.02
SND1-212ENST00000485871 RELQ04864 619 aaPredicted RBP8.66□□□□□ -1.02
SND1-212ENST00000485871 UNQ9165/PRO28630Q6UXU0 137 aa8.66□□□□□ -1.02
SND1-212ENST00000485871 LINC01551Q86U37 167 aa8.66□□□□□ -1.02
SND1-212ENST00000485871 C11orf44Q8N8P7 122 aa8.66□□□□□ -1.02
SND1-212ENST00000485871 FAM210BQ96KR6 192 aa8.66□□□□□ -1.02
SND1-212ENST00000485871 PAXXQ9BUH6 204 aa8.66□□□□□ -1.02
SND1-212ENST00000485871 YTHDF2Q9Y5A9 579 aaKnown RBP8.66□□□□□ -1.02
SND1-212ENST00000485871 TRAV9-1A0A075B6T8 112 aa8.65□□□□□ -1.02
SND1-212ENST00000485871 H3BRN7 92 aa8.65□□□□□ -1.02
SND1-212ENST00000485871 NPPCP23582 126 aa8.65□□□□□ -1.02
SND1-212ENST00000485871 RPS10P46783 165 aaKnown RBP8.65□□□□□ -1.02
SND1-212ENST00000485871 GALR1P47211 349 aa8.65□□□□□ -1.02
SND1-212ENST00000485871 RPL19P84098 196 aaKnown RBP8.65□□□□□ -1.02
SND1-212ENST00000485871 FHL3Q13643 280 aa8.65□□□□□ -1.02
SND1-212ENST00000485871 DEFB136Q30KP8 78 aa8.65□□□□□ -1.02
SND1-212ENST00000485871 GPHB5Q86YW7 130 aa8.65□□□□□ -1.02
SND1-212ENST00000485871 KLHL30-AS1Q8NEE0 82 aa8.65□□□□□ -1.02
SND1-212ENST00000485871 OR1B1Q8NGR6 318 aa8.65□□□□□ -1.02
SND1-212ENST00000485871 ZNF503Q96F45 646 aa8.65□□□□□ -1.02
SND1-212ENST00000485871 FAM167A-AS1Q96KT0 104 aa8.65□□□□□ -1.02
SND1-212ENST00000485871 PYGO2Q9BRQ0 406 aa8.65□□□□□ -1.02
SND1-212ENST00000485871 SLC25A2Q9BXI2 301 aa8.65□□□□□ -1.02
SND1-212ENST00000485871 OR51M1Q9H341 326 aa8.65□□□□□ -1.02
SND1-212ENST00000485871 TSSC4Q9Y5U2 329 aaPredicted RBP8.65□□□□□ -1.02
SND1-212ENST00000485871 U3KQE9 123 aa8.65□□□□□ -1.02
SND1-212ENST00000485871 SCO2A0A1W2PP80 73 aa8.64□□□□□ -1.03
SND1-212ENST00000485871 S100A9P06702 114 aaKnown RBP8.64□□□□□ -1.03
SND1-212ENST00000485871 ORM2P19652 201 aa8.64□□□□□ -1.03
SND1-212ENST00000485871 TAS2R60P59551 318 aa8.64□□□□□ -1.03
SND1-212ENST00000485871 C8orf86Q6ZUL3 223 aa8.64□□□□□ -1.03
SND1-212ENST00000485871 REC114Q7Z4M0 266 aa8.64□□□□□ -1.03
SND1-212ENST00000485871 SLC25A39Q9BZJ4 359 aaPredicted RBP8.64□□□□□ -1.03
SND1-212ENST00000485871 HIGD1AQ9Y241 93 aa8.64□□□□□ -1.03
SND1-212ENST00000485871 IGHV3OR16-8A0A075B7F1 116 aa8.63□□□□□ -1.03
SND1-212ENST00000485871 HELTA6NFD8 242 aa8.63□□□□□ -1.03
SND1-212ENST00000485871 LGALS9O00182 355 aa8.63□□□□□ -1.03
SND1-212ENST00000485871 MRPS12O15235 138 aaKnown RBP8.63□□□□□ -1.03
SND1-212ENST00000485871 PFN1P07737 140 aaKnown RBP8.63□□□□□ -1.03
SND1-212ENST00000485871 CRYBB3P26998 211 aa8.63□□□□□ -1.03
SND1-212ENST00000485871 HOXD3P31249 432 aaPredicted RBP8.63□□□□□ -1.03
SND1-212ENST00000485871 GNG4P50150 75 aa8.63□□□□□ -1.03
SND1-212ENST00000485871 FAM3BP58499 235 aaPredicted RBP8.63□□□□□ -1.03
SND1-212ENST00000485871 KHDC1LQ5JSQ8 128 aa8.63□□□□□ -1.03
SND1-212ENST00000485871 LINC00305Q7Z4B0 112 aa8.63□□□□□ -1.03
SND1-212ENST00000485871 SMIM12Q96EX1 92 aa8.63□□□□□ -1.03
SND1-212ENST00000485871 SFRP2Q96HF1 295 aa8.63□□□□□ -1.03
SND1-212ENST00000485871 RAX2Q96IS3 184 aa8.63□□□□□ -1.03
SND1-212ENST00000485871 DUX3Q96PT4 197 aa8.63□□□□□ -1.03
SND1-212ENST00000485871 CITED1Q99966 193 aa8.63□□□□□ -1.03
SND1-212ENST00000485871 SHANK2-AS3Q9BTD1 123 aa8.63□□□□□ -1.03
SND1-212ENST00000485871 SAV1Q9H4B6 383 aaPredicted RBP8.63□□□□□ -1.03
SND1-212ENST00000485871 SRD5A3Q9H8P0 318 aa8.63□□□□□ -1.03
SND1-212ENST00000485871 TMEM14CQ9P0S9 112 aa8.63□□□□□ -1.03
SND1-212ENST00000485871 URGCP-MRPS24S4R325 110 aa8.63□□□□□ -1.03
SND1-212ENST00000485871 MEGF8Q7Z7M0 2845 aa8.62□□□□□ -1.03
SND1-212ENST00000485871 TGIF2-C20orf24A0A0A6YYL0 155 aa8.62□□□□□ -1.03
SND1-212ENST00000485871 TRAV5A0A0B4J249 113 aa8.62□□□□□ -1.03
SND1-212ENST00000485871 C5orf52A6NGY3 159 aa8.62□□□□□ -1.03
SND1-212ENST00000485871 A8MWP6 167 aa8.62□□□□□ -1.03
SND1-212ENST00000485871 LINC01619G3V211 115 aa8.62□□□□□ -1.03
SND1-212ENST00000485871 K7EMT4 169 aa8.62□□□□□ -1.03
SND1-212ENST00000485871 UBE2CO00762 179 aa8.62□□□□□ -1.03
SND1-212ENST00000485871 TYMSP04818 313 aa8.62□□□□□ -1.03
SND1-212ENST00000485871 S100A8P05109 93 aa8.62□□□□□ -1.03
SND1-212ENST00000485871 CXCL1P09341 107 aa8.62□□□□□ -1.03
SND1-212ENST00000485871 OR10J4P0C629 311 aa8.62□□□□□ -1.03
SND1-212ENST00000485871 RPL35P42766 123 aaKnown RBP8.62□□□□□ -1.03
SND1-212ENST00000485871 CNN1P51911 297 aaKnown RBP8.62□□□□□ -1.03
SND1-212ENST00000485871 SLURP1P55000 103 aa8.62□□□□□ -1.03
SND1-212ENST00000485871 KLF5Q13887 457 aaPredicted RBP8.62□□□□□ -1.03
SND1-212ENST00000485871 RPEL1Q2QD12 228 aa8.62□□□□□ -1.03
SND1-212ENST00000485871 NDUFA11Q86Y39 141 aa8.62□□□□□ -1.03
SND1-212ENST00000485871 C3orf56Q8N813 242 aa8.62□□□□□ -1.03
SND1-212ENST00000485871 OR11H1Q8NG94 326 aa8.62□□□□□ -1.03
SND1-212ENST00000485871 OR1N2Q8NGR9 330 aa8.62□□□□□ -1.03
SND1-212ENST00000485871 C2CD4CQ8TF44 421 aa8.62□□□□□ -1.03
SND1-212ENST00000485871 RABAC1Q9UI14 185 aa8.62□□□□□ -1.03
SND1-212ENST00000485871 A0A1W2PRX2 142 aa8.61□□□□□ -1.03
SND1-212ENST00000485871 TMEM213A2RRL7 107 aa8.61□□□□□ -1.03
SND1-212ENST00000485871 ZNF98A6NK75 572 aa8.61□□□□□ -1.03
SND1-212ENST00000485871 BUB3O43684 328 aa8.61□□□□□ -1.03
SND1-212ENST00000485871 APOHP02749 345 aaPredicted RBP8.61□□□□□ -1.03
SND1-212ENST00000485871 GP9P14770 177 aa8.61□□□□□ -1.03
SND1-212ENST00000485871 EDN2P20800 178 aa8.61□□□□□ -1.03
SND1-212ENST00000485871 ZFP82Q8N141 532 aa8.61□□□□□ -1.03
SND1-212ENST00000485871 OR10G8Q8NGN5 311 aa8.61□□□□□ -1.03
SND1-212ENST00000485871 FXYD5Q96DB9 178 aa8.61□□□□□ -1.03
SND1-212ENST00000485871 DERL1Q9BUN8 251 aa8.61□□□□□ -1.03
SND1-212ENST00000485871 MGAM2Q2M2H8 2515 aa8.6□□□□□ -1.03
SND1-212ENST00000485871 GGTLC3B5MD39 225 aa8.6□□□□□ -1.03
SND1-212ENST00000485871 CCL24O00175 119 aa8.6□□□□□ -1.03
SND1-212ENST00000485871 ZNF207O43670 478 aaKnown RBP8.6□□□□□ -1.03
SND1-212ENST00000485871 SYNJ2BPP57105 145 aa8.6□□□□□ -1.03
SND1-212ENST00000485871 SUMO1P63165 101 aaKnown RBP8.6□□□□□ -1.03
SND1-212ENST00000485871 COX19Q49B96 90 aa8.6□□□□□ -1.03
SND1-212ENST00000485871 FAM106AQ4KMX7 169 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms