RNA–Protein interactions for RNA: ENST00000482519.1

VAMP4-204, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 3

Gene VAMP4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-204ENST00000482519 A0A087X0K7 114 aa11.96□□□□□ -0.49
VAMP4-204ENST00000482519 H3BTX0 84 aa11.96□□□□□ -0.49
VAMP4-204ENST00000482519 LY6G6CO95867 125 aa11.96□□□□□ -0.49
VAMP4-204ENST00000482519 CNN1P51911 297 aaKnown RBP11.96□□□□□ -0.49
VAMP4-204ENST00000482519 EMP1P54849 157 aa11.96□□□□□ -0.49
VAMP4-204ENST00000482519 B2MP61769 119 aa11.96□□□□□ -0.49
VAMP4-204ENST00000482519 OPCMLQ14982 345 aa11.96□□□□□ -0.49
VAMP4-204ENST00000482519 BPIFA4PQ86YQ2 179 aa11.96□□□□□ -0.49
VAMP4-204ENST00000482519 OR5C1Q8NGR4 320 aa11.96□□□□□ -0.49
VAMP4-204ENST00000482519 OR1L4Q8NGR5 311 aa11.96□□□□□ -0.49
VAMP4-204ENST00000482519 THAP6Q8TBB0 222 aa11.96□□□□□ -0.49
VAMP4-204ENST00000482519 SLC39A9Q9NUM3 307 aa11.96□□□□□ -0.49
VAMP4-204ENST00000482519 HYDINQ4G0P3 5121 aa11.96□□□□□ -0.5
VAMP4-204ENST00000482519 PLECQ15149 4684 aaKnown RBP11.95□□□□□ -0.5
VAMP4-204ENST00000482519 TRAV5A0A0B4J249 113 aa11.95□□□□□ -0.5
VAMP4-204ENST00000482519 H0YIZ8 118 aa11.95□□□□□ -0.5
VAMP4-204ENST00000482519 DUSP14O95147 198 aaKnown RBP11.95□□□□□ -0.5
VAMP4-204ENST00000482519 CXCL3P19876 107 aa11.95□□□□□ -0.5
VAMP4-204ENST00000482519 PRR20EP86478 221 aa11.95□□□□□ -0.5
VAMP4-204ENST00000482519 PRR20CP86479 221 aa11.95□□□□□ -0.5
VAMP4-204ENST00000482519 PRR20DP86480 221 aa11.95□□□□□ -0.5
VAMP4-204ENST00000482519 PRR20BP86481 221 aa11.95□□□□□ -0.5
VAMP4-204ENST00000482519 PRR20AP86496 221 aa11.95□□□□□ -0.5
VAMP4-204ENST00000482519 CLINT1Q14677 625 aa11.95□□□□□ -0.5
VAMP4-204ENST00000482519 PSG3Q16557 428 aa11.95□□□□□ -0.5
VAMP4-204ENST00000482519 PPP1R1CQ8WVI7 109 aa11.95□□□□□ -0.5
VAMP4-204ENST00000482519 PFDN5Q99471 154 aa11.95□□□□□ -0.5
VAMP4-204ENST00000482519 GOLT1BQ9Y3E0 138 aa11.95□□□□□ -0.5
VAMP4-204ENST00000482519 PXMP4Q9Y6I8 212 aa11.95□□□□□ -0.5
VAMP4-204ENST00000482519 MRPS12O15235 138 aaKnown RBP11.94□□□□□ -0.5
VAMP4-204ENST00000482519 RPL29P47914 159 aaKnown RBP11.94□□□□□ -0.5
VAMP4-204ENST00000482519 RHOBP62745 196 aa11.94□□□□□ -0.5
VAMP4-204ENST00000482519 HIST1H1AQ02539 215 aaPredicted RBP11.94□□□□□ -0.5
VAMP4-204ENST00000482519 SPINK13Q1W4C9 94 aa11.94□□□□□ -0.5
VAMP4-204ENST00000482519 ZNF705AQ6ZN79 300 aaPredicted RBP11.94□□□□□ -0.5
VAMP4-204ENST00000482519 ZNF767PQ75MW2 155 aa11.94□□□□□ -0.5
VAMP4-204ENST00000482519 TMEM208Q9BTX3 173 aa11.94□□□□□ -0.5
VAMP4-204ENST00000482519 HRH4Q9H3N8 390 aa11.94□□□□□ -0.5
VAMP4-204ENST00000482519 PPP1R14DQ9NXH3 145 aa11.94□□□□□ -0.5
VAMP4-204ENST00000482519 ALMS1Q8TCU4 4167 aa11.93□□□□□ -0.5
VAMP4-204ENST00000482519 ZNF705FA8MVS1 300 aaPredicted RBP11.93□□□□□ -0.5
VAMP4-204ENST00000482519 M0R2Z0 102 aa11.93□□□□□ -0.5
VAMP4-204ENST00000482519 LCN15Q6UWW0 184 aa11.93□□□□□ -0.5
VAMP4-204ENST00000482519 AMTNQ6UX39 209 aa11.93□□□□□ -0.5
VAMP4-204ENST00000482519 OR11H7Q8NGC8 314 aa11.93□□□□□ -0.5
VAMP4-204ENST00000482519 C2CD4CQ8TF44 421 aa11.93□□□□□ -0.5
VAMP4-204ENST00000482519 LINC00476Q8WZB0 136 aa11.93□□□□□ -0.5
VAMP4-204ENST00000482519 RPUSD4Q96CM3 377 aaKnown RBP11.93□□□□□ -0.5
VAMP4-204ENST00000482519 NPCDR1Q9BY65 106 aa11.93□□□□□ -0.5
VAMP4-204ENST00000482519 CELA1Q9UNI1 258 aa11.93□□□□□ -0.5
VAMP4-204ENST00000482519 DNAH1Q9P2D7 4330 aa11.92□□□□□ -0.5
VAMP4-204ENST00000482519 SMIM9A6NGZ8 99 aa11.92□□□□□ -0.5
VAMP4-204ENST00000482519 H3BQ15 152 aa11.92□□□□□ -0.5
VAMP4-204ENST00000482519 MPDU1O75352 247 aa11.92□□□□□ -0.5
VAMP4-204ENST00000482519 Q6ZTC4 211 aa11.92□□□□□ -0.5
VAMP4-204ENST00000482519 C1orf158Q8N1D5 194 aa11.92□□□□□ -0.5
VAMP4-204ENST00000482519 OR8A1Q8NGG7 326 aa11.92□□□□□ -0.5
VAMP4-204ENST00000482519 NEU1Q99519 415 aa11.92□□□□□ -0.5
VAMP4-204ENST00000482519 IGLL5B9A064 214 aa11.91□□□□□ -0.5
VAMP4-204ENST00000482519 C11orf94C9JXX5 98 aa11.91□□□□□ -0.5
VAMP4-204ENST00000482519 SLC17A3O00476 420 aa11.91□□□□□ -0.5
VAMP4-204ENST00000482519 MPC2O95563 127 aa11.91□□□□□ -0.5
VAMP4-204ENST00000482519 PET100P0DJ07 73 aa11.91□□□□□ -0.5
VAMP4-204ENST00000482519 CXCL2P19875 107 aa11.91□□□□□ -0.5
VAMP4-204ENST00000482519 GCSAMLQ5JQS6 135 aa11.91□□□□□ -0.5
VAMP4-204ENST00000482519 CHAC2Q8WUX2 184 aa11.91□□□□□ -0.5
VAMP4-204ENST00000482519 IGF2BP2-AS1Q96M15 143 aa11.91□□□□□ -0.5
VAMP4-204ENST00000482519 SLC50A1Q9BRV3 221 aa11.91□□□□□ -0.5
VAMP4-204ENST00000482519 RNF126Q9BV68 326 aa11.91□□□□□ -0.5
VAMP4-204ENST00000482519 ZNF331Q9NQX6 463 aaPredicted RBP11.91□□□□□ -0.5
VAMP4-204ENST00000482519 RFNGQ9Y644 331 aa11.91□□□□□ -0.5
VAMP4-204ENST00000482519 ALG5Q9Y673 324 aa11.91□□□□□ -0.5
VAMP4-204ENST00000482519 TRAV12-2A0A075B6T6 113 aa11.9□□□□□ -0.5
VAMP4-204ENST00000482519 A8MTW9 85 aa11.9□□□□□ -0.5
VAMP4-204ENST00000482519 INSP01308 110 aa11.9□□□□□ -0.5
VAMP4-204ENST00000482519 HBE1P02100 147 aa11.9□□□□□ -0.5
VAMP4-204ENST00000482519 IGLC2P0DOY2 106 aa11.9□□□□□ -0.5
VAMP4-204ENST00000482519 C12orf74Q32Q52 190 aa11.9□□□□□ -0.5
VAMP4-204ENST00000482519 BAP18Q8IXM2 172 aa11.9□□□□□ -0.5
VAMP4-204ENST00000482519 TRAV10A0A0B4J240 114 aa11.89□□□□□ -0.51
VAMP4-204ENST00000482519 LOC102723971A0A1B0GUV8 181 aa11.89□□□□□ -0.51
VAMP4-204ENST00000482519 TMEM189A5PLL7 270 aa11.89□□□□□ -0.51
VAMP4-204ENST00000482519 BOLA2-SMG1P6H3BVE0 249 aa11.89□□□□□ -0.51
VAMP4-204ENST00000482519 AMBPP02760 352 aa11.89□□□□□ -0.51
VAMP4-204ENST00000482519 SPART-AS1P0CW21 52 aa11.89□□□□□ -0.51
VAMP4-204ENST00000482519 GUK1Q16774 197 aa11.89□□□□□ -0.51
VAMP4-204ENST00000482519 RRN3P1Q2M238 152 aa11.89□□□□□ -0.51
VAMP4-204ENST00000482519 SMIM3Q9BZL3 60 aa11.89□□□□□ -0.51
VAMP4-204ENST00000482519 MBD2Q9UBB5 411 aa11.89□□□□□ -0.51
VAMP4-204ENST00000482519 PRAC2D3DTV9 90 aa11.88□□□□□ -0.51
VAMP4-204ENST00000482519 PTTG1O95997 202 aa11.88□□□□□ -0.51
VAMP4-204ENST00000482519 RPL12P30050 165 aaKnown RBP11.88□□□□□ -0.51
VAMP4-204ENST00000482519 OR10J6PQ8NGY7 276 aa11.88□□□□□ -0.51
VAMP4-204ENST00000482519 ATP5SQ99766 215 aa11.88□□□□□ -0.51
VAMP4-204ENST00000482519 WDR61Q9GZS3 305 aaKnown RBP11.88□□□□□ -0.51
VAMP4-204ENST00000482519 ZNF586Q9NXT0 402 aa11.88□□□□□ -0.51
VAMP4-204ENST00000482519 ZNF705GA8MUZ8 300 aaPredicted RBP11.87□□□□□ -0.51
VAMP4-204ENST00000482519 CRXO43186 299 aaPredicted RBP11.87□□□□□ -0.51
VAMP4-204ENST00000482519 PRM2P04554 102 aa11.87□□□□□ -0.51
VAMP4-204ENST00000482519 PYYP10082 97 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms