RNA–Protein interactions for RNA: ENST00000481484.1

VPS13D-208, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 360 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-208ENST00000481484 SLC25A32Q9H2D1 315 aa2.97□□□□□ -1.93
VPS13D-208ENST00000481484 MGAT4CQ9UBM8 478 aa2.97□□□□□ -1.93
VPS13D-208ENST00000481484 DKK2Q9UBU2 259 aa2.97□□□□□ -1.93
VPS13D-208ENST00000481484 CELA1Q9UNI1 258 aa2.97□□□□□ -1.93
VPS13D-208ENST00000481484 HIGD1AQ9Y241 93 aa2.97□□□□□ -1.93
VPS13D-208ENST00000481484 V9GYH0 126 aa2.97□□□□□ -1.93
VPS13D-208ENST00000481484 DMBT1Q9UGM3 2413 aaPredicted RBP2.96□□□□□ -1.94
VPS13D-208ENST00000481484 IGKV1OR2-108A0A075B7D4 117 aa2.96□□□□□ -1.94
VPS13D-208ENST00000481484 ZNF98A6NK75 572 aa2.96□□□□□ -1.94
VPS13D-208ENST00000481484 H3BRN7 92 aa2.96□□□□□ -1.94
VPS13D-208ENST00000481484 HYPMO75409 117 aa2.96□□□□□ -1.94
VPS13D-208ENST00000481484 NDUFB6O95139 128 aa2.96□□□□□ -1.94
VPS13D-208ENST00000481484 LINC00869P0C866 280 aa2.96□□□□□ -1.94
VPS13D-208ENST00000481484 IAPPP10997 89 aa2.96□□□□□ -1.94
VPS13D-208ENST00000481484 BTF3P20290 206 aaKnown RBP2.96□□□□□ -1.94
VPS13D-208ENST00000481484 TNFSF8P32971 234 aa2.96□□□□□ -1.94
VPS13D-208ENST00000481484 DAD1P61803 113 aa2.96□□□□□ -1.94
VPS13D-208ENST00000481484 POLR2GP62487 172 aaKnown RBP eCLIP2.96□□□□□ -1.94
VPS13D-208ENST00000481484 ZNF90Q03938 601 aa2.96□□□□□ -1.94
VPS13D-208ENST00000481484 PPP1R1AQ13522 171 aa2.96□□□□□ -1.94
VPS13D-208ENST00000481484 C4orf46Q504U0 113 aa2.96□□□□□ -1.94
VPS13D-208ENST00000481484 TTC32Q5I0X7 151 aa2.96□□□□□ -1.94
VPS13D-208ENST00000481484 FAM222AQ5U5X8 452 aa2.96□□□□□ -1.94
VPS13D-208ENST00000481484 FAM78BQ5VT40 261 aa2.96□□□□□ -1.94
VPS13D-208ENST00000481484 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.96□□□□□ -1.94
VPS13D-208ENST00000481484 ZNF493Q6ZR52 646 aa2.96□□□□□ -1.94
VPS13D-208ENST00000481484 CYP2G1PQ6ZSU1 146 aa2.96□□□□□ -1.94
VPS13D-208ENST00000481484 OR4B1Q8NGF8 309 aa2.96□□□□□ -1.94
VPS13D-208ENST00000481484 OR10J6PQ8NGY7 276 aa2.96□□□□□ -1.94
VPS13D-208ENST00000481484 C16orf74Q96GX8 76 aa2.96□□□□□ -1.94
VPS13D-208ENST00000481484 LINC00052Q96N35 136 aa2.96□□□□□ -1.94
VPS13D-208ENST00000481484 ODF3Q96PU9 254 aa2.96□□□□□ -1.94
VPS13D-208ENST00000481484 SHANK2-AS3Q9BTD1 123 aa2.96□□□□□ -1.94
VPS13D-208ENST00000481484 WDR12Q9GZL7 423 aaKnown RBP2.96□□□□□ -1.94
VPS13D-208ENST00000481484 MAGT1Q9H0U3 335 aa2.96□□□□□ -1.94
VPS13D-208ENST00000481484 SLC25A22Q9H936 323 aa2.96□□□□□ -1.94
VPS13D-208ENST00000481484 PAIP2BQ9ULR5 123 aaKnown RBP2.96□□□□□ -1.94
VPS13D-208ENST00000481484 PXMP4Q9Y6I8 212 aa2.96□□□□□ -1.94
VPS13D-208ENST00000481484 PKD1P98161 4303 aa2.96□□□□□ -1.94
VPS13D-208ENST00000481484 SMCO3A2RU48 225 aa2.95□□□□□ -1.94
VPS13D-208ENST00000481484 CCDC160A6NGH7 325 aa2.95□□□□□ -1.94
VPS13D-208ENST00000481484 H7BYZ3 331 aa2.95□□□□□ -1.94
VPS13D-208ENST00000481484 SSSCA1O60232 199 aa2.95□□□□□ -1.94
VPS13D-208ENST00000481484 ZNF253O75346 499 aa2.95□□□□□ -1.94
VPS13D-208ENST00000481484 IL5P05113 134 aa2.95□□□□□ -1.94
VPS13D-208ENST00000481484 HOXB5P09067 269 aa2.95□□□□□ -1.94
VPS13D-208ENST00000481484 CNN1P51911 297 aaKnown RBP2.95□□□□□ -1.94
VPS13D-208ENST00000481484 TAS2R60P59551 318 aa2.95□□□□□ -1.94
VPS13D-208ENST00000481484 OR2F1Q13607 317 aa2.95□□□□□ -1.94
VPS13D-208ENST00000481484 RAB31Q13636 194 aa2.95□□□□□ -1.94
VPS13D-208ENST00000481484 ZNF846Q147U1 533 aa2.95□□□□□ -1.94
VPS13D-208ENST00000481484 GUK1Q16774 197 aa2.95□□□□□ -1.94
VPS13D-208ENST00000481484 C21orf62-AS1Q17RA5 79 aa2.95□□□□□ -1.94
VPS13D-208ENST00000481484 SPANXN5Q5MJ07 72 aa2.95□□□□□ -1.94
VPS13D-208ENST00000481484 AMTNQ6UX39 209 aa2.95□□□□□ -1.94
VPS13D-208ENST00000481484 TMEM14EPQ6UXP3 125 aa2.95□□□□□ -1.94
VPS13D-208ENST00000481484 GSG1LQ6UXU4 331 aa2.95□□□□□ -1.94
VPS13D-208ENST00000481484 CCDC190Q86UF4 302 aa2.95□□□□□ -1.94
VPS13D-208ENST00000481484 ZNF738Q8NE65 137 aa2.95□□□□□ -1.94
VPS13D-208ENST00000481484 OR11H7Q8NGC8 314 aa2.95□□□□□ -1.94
VPS13D-208ENST00000481484 OR10P1Q8NGE3 313 aa2.95□□□□□ -1.94
VPS13D-208ENST00000481484 TMEM263Q8WUH6 116 aaKnown RBP2.95□□□□□ -1.94
VPS13D-208ENST00000481484 SMIM8Q96KF7 97 aa2.95□□□□□ -1.94
VPS13D-208ENST00000481484 PFDN5Q99471 154 aa2.95□□□□□ -1.94
VPS13D-208ENST00000481484 SLC25A39Q9BZJ4 359 aaPredicted RBP2.95□□□□□ -1.94
VPS13D-208ENST00000481484 SRRQ9GZT4 340 aa2.95□□□□□ -1.94
VPS13D-208ENST00000481484 KCNIP2Q9NS61 270 aa2.95□□□□□ -1.94
VPS13D-208ENST00000481484 PPP1R14DQ9NXH3 145 aa2.95□□□□□ -1.94
VPS13D-208ENST00000481484 YTHDF2Q9Y5A9 579 aaKnown RBP2.95□□□□□ -1.94
VPS13D-208ENST00000481484 IGHV3OR16-12A0A075B7B8 117 aa2.94□□□□□ -1.94
VPS13D-208ENST00000481484 C9orf170A2RU37 121 aa2.94□□□□□ -1.94
VPS13D-208ENST00000481484 PRSS29PA6NIE9 313 aa2.94□□□□□ -1.94
VPS13D-208ENST00000481484 H3BP45 60 aa2.94□□□□□ -1.94
VPS13D-208ENST00000481484 L7N2F9 121 aa2.94□□□□□ -1.94
VPS13D-208ENST00000481484 COX7A2P2O60397 106 aa2.94□□□□□ -1.94
VPS13D-208ENST00000481484 MPDU1O75352 247 aa2.94□□□□□ -1.94
VPS13D-208ENST00000481484 ATP5G1P05496 136 aa2.94□□□□□ -1.94
VPS13D-208ENST00000481484 OR4E1P0C645 316 aa2.94□□□□□ -1.94
VPS13D-208ENST00000481484 ORM2P19652 201 aa2.94□□□□□ -1.94
VPS13D-208ENST00000481484 CXCL3P19876 107 aa2.94□□□□□ -1.94
VPS13D-208ENST00000481484 PVALBP20472 110 aaPredicted RBP2.94□□□□□ -1.94
VPS13D-208ENST00000481484 CDKN1BP46527 198 aa2.94□□□□□ -1.94
VPS13D-208ENST00000481484 ATP5G3P48201 142 aa2.94□□□□□ -1.94
VPS13D-208ENST00000481484 EMP1P54849 157 aa2.94□□□□□ -1.94
VPS13D-208ENST00000481484 VAMP2P63027 116 aa2.94□□□□□ -1.94
VPS13D-208ENST00000481484 HBG1P69891 147 aa2.94□□□□□ -1.94
VPS13D-208ENST00000481484 HBG2P69892 147 aa2.94□□□□□ -1.94
VPS13D-208ENST00000481484 HIST1H1AQ02539 215 aaPredicted RBP2.94□□□□□ -1.94
VPS13D-208ENST00000481484 PDE6HQ13956 83 aa2.94□□□□□ -1.94
VPS13D-208ENST00000481484 SPINK13Q1W4C9 94 aa2.94□□□□□ -1.94
VPS13D-208ENST00000481484 IAH1Q2TAA2 248 aaPredicted RBP2.94□□□□□ -1.94
VPS13D-208ENST00000481484 GDF5OSQ5U4N7 250 aa2.94□□□□□ -1.94
VPS13D-208ENST00000481484 TMEM88Q6PEY1 159 aa2.94□□□□□ -1.94
VPS13D-208ENST00000481484 Q6ZR54 194 aa2.94□□□□□ -1.94
VPS13D-208ENST00000481484 STX12Q86Y82 276 aa2.94□□□□□ -1.94
VPS13D-208ENST00000481484 BPIFA4PQ86YQ2 179 aa2.94□□□□□ -1.94
VPS13D-208ENST00000481484 ZBTB8BQ8NAP8 495 aaPredicted RBP2.94□□□□□ -1.94
VPS13D-208ENST00000481484 ZNF680Q8NEM1 530 aa2.94□□□□□ -1.94
VPS13D-208ENST00000481484 OR8A1Q8NGG7 326 aa2.94□□□□□ -1.94
VPS13D-208ENST00000481484 OR1L4Q8NGR5 311 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 141.1 ms