RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 LRRC20Q8TCA0 184 aa5.09□□□□□ -1.6
BRCA1-215ENST00000478531 SCGB1C1Q8TD33 95 aa5.09□□□□□ -1.6
BRCA1-215ENST00000478531 WFDC1Q9HC57 220 aa5.09□□□□□ -1.6
BRCA1-215ENST00000478531 KCNIP2Q9NS61 270 aa5.09□□□□□ -1.6
BRCA1-215ENST00000478531 ISLRO14498 428 aa5.08□□□□□ -1.6
BRCA1-215ENST00000478531 SOCS3O14543 225 aa5.08□□□□□ -1.6
BRCA1-215ENST00000478531 CA1P00915 261 aaPredicted RBP5.08□□□□□ -1.6
BRCA1-215ENST00000478531 PRB4P10163 310 aaPredicted RBP5.08□□□□□ -1.6
BRCA1-215ENST00000478531 BPIFA4PQ86YQ2 179 aa5.08□□□□□ -1.6
BRCA1-215ENST00000478531 C20orf173Q96LM9 149 aa5.08□□□□□ -1.6
BRCA1-215ENST00000478531 C17orf77Q96MU5 243 aa5.08□□□□□ -1.6
BRCA1-215ENST00000478531 AQP10Q96PS8 301 aa5.08□□□□□ -1.6
BRCA1-215ENST00000478531 RNF24Q9Y225 148 aa5.08□□□□□ -1.6
BRCA1-215ENST00000478531 F6UB75 175 aa5.07□□□□□ -1.6
BRCA1-215ENST00000478531 IGKV3-20P01619 116 aa5.07□□□□□ -1.6
BRCA1-215ENST00000478531 COTL1Q14019 142 aa5.07□□□□□ -1.6
BRCA1-215ENST00000478531 FFAR4Q5NUL3 377 aa5.07□□□□□ -1.6
BRCA1-215ENST00000478531 GDF5OSQ5U4N7 250 aa5.07□□□□□ -1.6
BRCA1-215ENST00000478531 FAM78BQ5VT40 261 aa5.07□□□□□ -1.6
BRCA1-215ENST00000478531 SAMD13Q5VXD3 122 aa5.07□□□□□ -1.6
BRCA1-215ENST00000478531 SPATA31B1PQ5VZV4 182 aa5.07□□□□□ -1.6
BRCA1-215ENST00000478531 HSD17B11Q8NBQ5 300 aa5.07□□□□□ -1.6
BRCA1-215ENST00000478531 GATAD1Q8WUU5 269 aa5.07□□□□□ -1.6
BRCA1-215ENST00000478531 CSTL1Q9H114 145 aa5.07□□□□□ -1.6
BRCA1-215ENST00000478531 RFNGQ9Y644 331 aa5.07□□□□□ -1.6
BRCA1-215ENST00000478531 STARD9Q9P2P6 4700 aa5.07□□□□□ -1.6
BRCA1-215ENST00000478531 KIR2DL5BA0A0G2JN68 375 aa5.07□□□□□ -1.6
BRCA1-215ENST00000478531 KIR2DL5BA0A0G2JPC4 375 aa5.07□□□□□ -1.6
BRCA1-215ENST00000478531 RNF222A6NCQ9 220 aa5.07□□□□□ -1.6
BRCA1-215ENST00000478531 G3V3Q6 166 aa5.07□□□□□ -1.6
BRCA1-215ENST00000478531 SLC17A3O00476 420 aa5.07□□□□□ -1.6
BRCA1-215ENST00000478531 ARPC5O15511 151 aa5.07□□□□□ -1.6
BRCA1-215ENST00000478531 HLA-DMBP28068 263 aa5.07□□□□□ -1.6
BRCA1-215ENST00000478531 TAGLN2P37802 199 aaKnown RBP5.07□□□□□ -1.6
BRCA1-215ENST00000478531 SSTP61278 116 aa5.07□□□□□ -1.6
BRCA1-215ENST00000478531 ZNF266Q14584 549 aa5.07□□□□□ -1.6
BRCA1-215ENST00000478531 TRPT1Q86TN4 253 aaKnown RBP5.07□□□□□ -1.6
BRCA1-215ENST00000478531 KIR2DL5AQ8N109 375 aa5.07□□□□□ -1.6
BRCA1-215ENST00000478531 LINC00528Q8N1L1 170 aa5.07□□□□□ -1.6
BRCA1-215ENST00000478531 ZNF738Q8NE65 137 aa5.07□□□□□ -1.6
BRCA1-215ENST00000478531 OR4B1Q8NGF8 309 aa5.07□□□□□ -1.6
BRCA1-215ENST00000478531 KIR2DL5BQ8NHK3 375 aa5.07□□□□□ -1.6
BRCA1-215ENST00000478531 SEPSECSQ9HD40 501 aaKnown RBP5.07□□□□□ -1.6
BRCA1-215ENST00000478531 RPRMQ9NS64 109 aa5.07□□□□□ -1.6
BRCA1-215ENST00000478531 TNFSF18Q9UNG2 199 aa5.07□□□□□ -1.6
BRCA1-215ENST00000478531 A0A087X0K7 114 aa5.06□□□□□ -1.6
BRCA1-215ENST00000478531 TRAV8-2A0A0B4J237 113 aa5.06□□□□□ -1.6
BRCA1-215ENST00000478531 MRPS12O15235 138 aaKnown RBP5.06□□□□□ -1.6
BRCA1-215ENST00000478531 SPRY2O43597 315 aa5.06□□□□□ -1.6
BRCA1-215ENST00000478531 PYYP10082 97 aa5.06□□□□□ -1.6
BRCA1-215ENST00000478531 HLA-DRB4P13762 266 aa5.06□□□□□ -1.6
BRCA1-215ENST00000478531 C4BPBP20851 252 aa5.06□□□□□ -1.6
BRCA1-215ENST00000478531 EBLN2Q6P2I7 272 aa5.06□□□□□ -1.6
BRCA1-215ENST00000478531 LCN15Q6UWW0 184 aa5.06□□□□□ -1.6
BRCA1-215ENST00000478531 FOXI2Q6ZQN5 318 aa5.06□□□□□ -1.6
BRCA1-215ENST00000478531 MIR17HGQ75NE6 70 aa5.06□□□□□ -1.6
BRCA1-215ENST00000478531 BLNKQ8WV28 456 aa5.06□□□□□ -1.6
BRCA1-215ENST00000478531 OVOL2Q9BRP0 275 aa5.06□□□□□ -1.6
BRCA1-215ENST00000478531 PARD6GQ9BYG4 376 aaPredicted RBP5.06□□□□□ -1.6
BRCA1-215ENST00000478531 SAV1Q9H4B6 383 aaPredicted RBP5.06□□□□□ -1.6
BRCA1-215ENST00000478531 CLEC5AQ9NY25 188 aa5.06□□□□□ -1.6
BRCA1-215ENST00000478531 HLA-DRB4X5D2U9 266 aa5.06□□□□□ -1.6
BRCA1-215ENST00000478531 H3BMM0 161 aa5.05□□□□□ -1.6
BRCA1-215ENST00000478531 H3BQ15 152 aa5.05□□□□□ -1.6
BRCA1-215ENST00000478531 OR7C2O60412 319 aa5.05□□□□□ -1.6
BRCA1-215ENST00000478531 CIDEAO60543 219 aa5.05□□□□□ -1.6
BRCA1-215ENST00000478531 EIF3GO75821 320 aaKnown RBP eCLIP5.05□□□□□ -1.6
BRCA1-215ENST00000478531 ZNF705DP0CH99 300 aaPredicted RBP5.05□□□□□ -1.6
BRCA1-215ENST00000478531 ZNF705BP0CI00 300 aaPredicted RBP5.05□□□□□ -1.6
BRCA1-215ENST00000478531 IGLC2P0DOY2 106 aa5.05□□□□□ -1.6
BRCA1-215ENST00000478531 SPP1P10451 314 aa5.05□□□□□ -1.6
BRCA1-215ENST00000478531 FXYD7P58549 80 aa5.05□□□□□ -1.6
BRCA1-215ENST00000478531 RPL7L1Q6DKI1 246 aaKnown RBP5.05□□□□□ -1.6
BRCA1-215ENST00000478531 Q6ZWC4 215 aa5.05□□□□□ -1.6
BRCA1-215ENST00000478531 WWC2-AS2Q96NR7 200 aa5.05□□□□□ -1.6
BRCA1-215ENST00000478531 LYSTQ99698 3801 aa5.05□□□□□ -1.6
BRCA1-215ENST00000478531 SLC25A2Q9BXI2 301 aa5.05□□□□□ -1.6
BRCA1-215ENST00000478531 SH3BGRL3Q9H299 93 aa5.05□□□□□ -1.6
BRCA1-215ENST00000478531 FUT9Q9Y231 359 aa5.05□□□□□ -1.6
BRCA1-215ENST00000478531 BORCS7-ASMTA0A0B4J1R7 106 aa5.05□□□□□ -1.6
BRCA1-215ENST00000478531 A0A0J9YX75 114 aa5.05□□□□□ -1.6
BRCA1-215ENST00000478531 OR10J4P0C629 311 aa5.05□□□□□ -1.6
BRCA1-215ENST00000478531 CXCL2P19875 107 aa5.05□□□□□ -1.6
BRCA1-215ENST00000478531 RAB2AP61019 212 aa5.05□□□□□ -1.6
BRCA1-215ENST00000478531 RHOBP62745 196 aa5.05□□□□□ -1.6
BRCA1-215ENST00000478531 MORN3Q6PF18 240 aaPredicted RBP5.05□□□□□ -1.6
BRCA1-215ENST00000478531 RNF183Q96D59 192 aa5.05□□□□□ -1.6
BRCA1-215ENST00000478531 SLC50A1Q9BRV3 221 aa5.05□□□□□ -1.6
BRCA1-215ENST00000478531 MRPL32Q9BYC8 188 aaKnown RBP5.05□□□□□ -1.6
BRCA1-215ENST00000478531 MFFQ9GZY8 342 aa5.05□□□□□ -1.6
BRCA1-215ENST00000478531 HRH4Q9H3N8 390 aa5.05□□□□□ -1.6
BRCA1-215ENST00000478531 ZNF331Q9NQX6 463 aaPredicted RBP5.05□□□□□ -1.6
BRCA1-215ENST00000478531 XCL2Q9UBD3 114 aa5.05□□□□□ -1.6
BRCA1-215ENST00000478531 XKRY2A2RUG3 117 aa5.04□□□□□ -1.6
BRCA1-215ENST00000478531 ZNF705FA8MVS1 300 aaPredicted RBP5.04□□□□□ -1.6
BRCA1-215ENST00000478531 HSBP1L1C9JCN9 74 aa5.04□□□□□ -1.6
BRCA1-215ENST00000478531 GIG44P09565 113 aaPredicted RBP5.04□□□□□ -1.6
BRCA1-215ENST00000478531 ATP6V0CP27449 155 aa5.04□□□□□ -1.6
BRCA1-215ENST00000478531 NUTF2P61970 127 aaKnown RBP5.04□□□□□ -1.6
BRCA1-215ENST00000478531 HIST1H1AQ02539 215 aaPredicted RBP5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms