RNA–Protein interactions for RNA: ENST00000478021.1

TRAF4-211, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-211ENST00000478021 ZNF738Q8NE65 137 aa16.47■□□□□ 0.23
TRAF4-211ENST00000478021 C11orf45Q8TAV5 145 aa16.47■□□□□ 0.23
TRAF4-211ENST00000478021 THAP6Q8TBB0 222 aa16.47■□□□□ 0.23
TRAF4-211ENST00000478021 LRRC20Q8TCA0 184 aa16.47■□□□□ 0.23
TRAF4-211ENST00000478021 DNAJC4Q9NNZ3 241 aa16.47■□□□□ 0.23
TRAF4-211ENST00000478021 RNF24Q9Y225 148 aa16.47■□□□□ 0.23
TRAF4-211ENST00000478021 PXMP4Q9Y6I8 212 aa16.47■□□□□ 0.23
TRAF4-211ENST00000478021 TRAV5A0A0B4J249 113 aa16.46■□□□□ 0.23
TRAF4-211ENST00000478021 H3BTX0 84 aa16.46■□□□□ 0.23
TRAF4-211ENST00000478021 MPC2O95563 127 aa16.46■□□□□ 0.23
TRAF4-211ENST00000478021 PTTG1O95997 202 aa16.46■□□□□ 0.23
TRAF4-211ENST00000478021 PSG9Q00887 426 aa16.46■□□□□ 0.23
TRAF4-211ENST00000478021 OR1L4Q8NGR5 311 aa16.46■□□□□ 0.23
TRAF4-211ENST00000478021 CLUHP3Q96NS8 147 aa16.46■□□□□ 0.23
TRAF4-211ENST00000478021 RNF126Q9BV68 326 aa16.46■□□□□ 0.23
TRAF4-211ENST00000478021 NUPR2A6NF83 97 aa16.45■□□□□ 0.22
TRAF4-211ENST00000478021 CXCL3P19876 107 aa16.45■□□□□ 0.22
TRAF4-211ENST00000478021 CEMP1Q6PRD7 247 aaPredicted RBP16.45■□□□□ 0.22
TRAF4-211ENST00000478021 BPIFA4PQ86YQ2 179 aa16.45■□□□□ 0.22
TRAF4-211ENST00000478021 PHLDA1Q8WV24 401 aaPredicted RBP16.45■□□□□ 0.22
TRAF4-211ENST00000478021 NPCDR1Q9BY65 106 aa16.45■□□□□ 0.22
TRAF4-211ENST00000478021 MFFQ9GZY8 342 aa16.45■□□□□ 0.22
TRAF4-211ENST00000478021 IGHV3OR16-12A0A075B7B8 117 aa16.44■□□□□ 0.22
TRAF4-211ENST00000478021 CHAC2Q8WUX2 184 aa16.44■□□□□ 0.22
TRAF4-211ENST00000478021 PFDN5Q99471 154 aa16.44■□□□□ 0.22
TRAF4-211ENST00000478021 MPDU1O75352 247 aa16.43■□□□□ 0.22
TRAF4-211ENST00000478021 JTBO76095 146 aa16.43■□□□□ 0.22
TRAF4-211ENST00000478021 PET100P0DJ07 73 aa16.43■□□□□ 0.22
TRAF4-211ENST00000478021 CNN1P51911 297 aaKnown RBP16.43■□□□□ 0.22
TRAF4-211ENST00000478021 PSG3Q16557 428 aa16.43■□□□□ 0.22
TRAF4-211ENST00000478021 A8MTW9 85 aa16.42■□□□□ 0.22
TRAF4-211ENST00000478021 SLC17A3O00476 420 aa16.42■□□□□ 0.22
TRAF4-211ENST00000478021 GCSAMLQ5JQS6 135 aa16.42■□□□□ 0.22
TRAF4-211ENST00000478021 LCN15Q6UWW0 184 aa16.42■□□□□ 0.22
TRAF4-211ENST00000478021 AMTNQ6UX39 209 aa16.42■□□□□ 0.22
TRAF4-211ENST00000478021 ZNF705AQ6ZN79 300 aaPredicted RBP16.42■□□□□ 0.22
TRAF4-211ENST00000478021 MBD2Q9UBB5 411 aa16.42■□□□□ 0.22
TRAF4-211ENST00000478021 H3BQ15 152 aa16.41■□□□□ 0.22
TRAF4-211ENST00000478021 DUSP14O95147 198 aaKnown RBP16.41■□□□□ 0.22
TRAF4-211ENST00000478021 CXCL2P19875 107 aa16.41■□□□□ 0.22
TRAF4-211ENST00000478021 HIST1H1AQ02539 215 aaPredicted RBP16.41■□□□□ 0.22
TRAF4-211ENST00000478021 OR11H7Q8NGC8 314 aa16.41■□□□□ 0.22
TRAF4-211ENST00000478021 ZNF331Q9NQX6 463 aaPredicted RBP16.41■□□□□ 0.22
TRAF4-211ENST00000478021 HSPB11Q9Y547 144 aa16.41■□□□□ 0.22
TRAF4-211ENST00000478021 IGLC2P0DOY2 106 aa16.4■□□□□ 0.22
TRAF4-211ENST00000478021 RPL12P30050 165 aaKnown RBP16.4■□□□□ 0.22
TRAF4-211ENST00000478021 SLC50A1Q9BRV3 221 aa16.4■□□□□ 0.22
TRAF4-211ENST00000478021 SMIM3Q9BZL3 60 aa16.4■□□□□ 0.22
TRAF4-211ENST00000478021 WDR61Q9GZS3 305 aaKnown RBP16.4■□□□□ 0.22
TRAF4-211ENST00000478021 CELA1Q9UNI1 258 aa16.4■□□□□ 0.22
TRAF4-211ENST00000478021 ZNF705FA8MVS1 300 aaPredicted RBP16.39■□□□□ 0.21
TRAF4-211ENST00000478021 M0R2Z0 102 aa16.39■□□□□ 0.21
TRAF4-211ENST00000478021 SPINK13Q1W4C9 94 aa16.39■□□□□ 0.21
TRAF4-211ENST00000478021 C1orf158Q8N1D5 194 aa16.39■□□□□ 0.21
TRAF4-211ENST00000478021 OR8A1Q8NGG7 326 aa16.39■□□□□ 0.21
TRAF4-211ENST00000478021 RPUSD4Q96CM3 377 aaKnown RBP16.39■□□□□ 0.21
TRAF4-211ENST00000478021 ATP5SQ99766 215 aa16.39■□□□□ 0.21
TRAF4-211ENST00000478021 KLK5Q9Y337 293 aaPredicted RBP16.39■□□□□ 0.21
TRAF4-211ENST00000478021 FCN2Q15485 313 aa16.38■□□□□ 0.21
TRAF4-211ENST00000478021 MED28Q9H204 178 aa16.38■□□□□ 0.21
TRAF4-211ENST00000478021 HRH4Q9H3N8 390 aa16.38■□□□□ 0.21
TRAF4-211ENST00000478021 GOLT1BQ9Y3E0 138 aa16.38■□□□□ 0.21
TRAF4-211ENST00000478021 RHOBP62745 196 aa16.37■□□□□ 0.21
TRAF4-211ENST00000478021 NEU1Q99519 415 aa16.37■□□□□ 0.21
TRAF4-211ENST00000478021 ZNF586Q9NXT0 402 aa16.37■□□□□ 0.21
TRAF4-211ENST00000478021 EMP1P54849 157 aa16.36■□□□□ 0.21
TRAF4-211ENST00000478021 ZNF767PQ75MW2 155 aa16.36■□□□□ 0.21
TRAF4-211ENST00000478021 BAP18Q8IXM2 172 aa16.36■□□□□ 0.21
TRAF4-211ENST00000478021 SAT2Q96F10 170 aaPredicted RBP16.36■□□□□ 0.21
TRAF4-211ENST00000478021 IGF2BP2-AS1Q96M15 143 aa16.36■□□□□ 0.21
TRAF4-211ENST00000478021 PLECQ15149 4684 aaKnown RBP16.36■□□□□ 0.21
TRAF4-211ENST00000478021 PRAC2D3DTV9 90 aa16.35■□□□□ 0.21
TRAF4-211ENST00000478021 BOLA2-SMG1P6H3BVE0 249 aa16.35■□□□□ 0.21
TRAF4-211ENST00000478021 PYYP10082 97 aa16.35■□□□□ 0.21
TRAF4-211ENST00000478021 Q6ZTC4 211 aa16.35■□□□□ 0.21
TRAF4-211ENST00000478021 MIR17HGQ75NE6 70 aa16.35■□□□□ 0.21
TRAF4-211ENST00000478021 KCNIP2Q9NS61 270 aa16.35■□□□□ 0.21
TRAF4-211ENST00000478021 PPP1R14DQ9NXH3 145 aa16.35■□□□□ 0.21
TRAF4-211ENST00000478021 DNAH1Q9P2D7 4330 aa16.34■□□□□ 0.21
TRAF4-211ENST00000478021 ALMS1Q8TCU4 4167 aa16.34■□□□□ 0.21
TRAF4-211ENST00000478021 TRAV12-2A0A075B6T6 113 aa16.34■□□□□ 0.21
TRAF4-211ENST00000478021 SMIM9A6NGZ8 99 aa16.34■□□□□ 0.21
TRAF4-211ENST00000478021 C17orf112F2Z3M2 114 aa16.34■□□□□ 0.21
TRAF4-211ENST00000478021 CRXO43186 299 aaPredicted RBP16.34■□□□□ 0.21
TRAF4-211ENST00000478021 AMBPP02760 352 aa16.34■□□□□ 0.21
TRAF4-211ENST00000478021 GUK1Q16774 197 aa16.34■□□□□ 0.21
TRAF4-211ENST00000478021 TMEM208Q9BTX3 173 aa16.34■□□□□ 0.21
TRAF4-211ENST00000478021 SLC25A2Q9BXI2 301 aa16.34■□□□□ 0.21
TRAF4-211ENST00000478021 TMEM14CQ9P0S9 112 aa16.34■□□□□ 0.21
TRAF4-211ENST00000478021 RFNGQ9Y644 331 aa16.34■□□□□ 0.21
TRAF4-211ENST00000478021 INSP01308 110 aa16.33■□□□□ 0.2
TRAF4-211ENST00000478021 IFNA5P01569 189 aa16.33■□□□□ 0.2
TRAF4-211ENST00000478021 LINC00476Q8WZB0 136 aa16.33■□□□□ 0.2
TRAF4-211ENST00000478021 WFDC1Q9HC57 220 aa16.33■□□□□ 0.2
TRAF4-211ENST00000478021 TRBV19A0A075B6N1 114 aa16.32■□□□□ 0.2
TRAF4-211ENST00000478021 HBE1P02100 147 aa16.32■□□□□ 0.2
TRAF4-211ENST00000478021 HYDINQ4G0P3 5121 aa16.32■□□□□ 0.2
TRAF4-211ENST00000478021 SCGB1C1Q8TD33 95 aa16.32■□□□□ 0.2
TRAF4-211ENST00000478021 BLNKQ8WV28 456 aa16.32■□□□□ 0.2
TRAF4-211ENST00000478021 LY6G6CO95867 125 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 387.2 ms