RNA–Protein interactions for RNA: ENST00000477531.3

CLDN11-204, Transcript of claudin 11, humanhuman

TSL 3

Gene CLDN11, Length 1,065 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-204ENST00000477531 FAM222AQ5U5X8 452 aa11.25□□□□□ -0.61
CLDN11-204ENST00000477531 C1orf158Q8N1D5 194 aa11.25□□□□□ -0.61
CLDN11-204ENST00000477531 ENKURQ8TC29 256 aa11.25□□□□□ -0.61
CLDN11-204ENST00000477531 NUDT15Q9NV35 164 aa11.25□□□□□ -0.61
CLDN11-204ENST00000477531 LSM5Q9Y4Y9 91 aaKnown RBP11.25□□□□□ -0.61
CLDN11-204ENST00000477531 A0A087X0K7 114 aa11.24□□□□□ -0.61
CLDN11-204ENST00000477531 TRAV8-2A0A0B4J237 113 aa11.24□□□□□ -0.61
CLDN11-204ENST00000477531 COX7A2P2O60397 106 aa11.24□□□□□ -0.61
CLDN11-204ENST00000477531 H2AFB2P0C5Z0 115 aa11.24□□□□□ -0.61
CLDN11-204ENST00000477531 CAV2P51636 162 aa11.24□□□□□ -0.61
CLDN11-204ENST00000477531 RHOBP62745 196 aa11.24□□□□□ -0.61
CLDN11-204ENST00000477531 SPINK13Q1W4C9 94 aa11.24□□□□□ -0.61
CLDN11-204ENST00000477531 AMTNQ6UX39 209 aa11.24□□□□□ -0.61
CLDN11-204ENST00000477531 C12orf45Q8N5I9 185 aaPredicted RBP11.24□□□□□ -0.61
CLDN11-204ENST00000477531 OR11H7Q8NGC8 314 aa11.24□□□□□ -0.61
CLDN11-204ENST00000477531 FAM210BQ96KR6 192 aa11.24□□□□□ -0.61
CLDN11-204ENST00000477531 YTHDF2Q9Y5A9 579 aaKnown RBP11.24□□□□□ -0.61
CLDN11-204ENST00000477531 M0R2Z0 102 aa11.23□□□□□ -0.61
CLDN11-204ENST00000477531 HIST1H1AQ02539 215 aaPredicted RBP11.23□□□□□ -0.61
CLDN11-204ENST00000477531 ARL16Q0P5N6 197 aa11.23□□□□□ -0.61
CLDN11-204ENST00000477531 OXA1LQ15070 435 aa11.23□□□□□ -0.61
CLDN11-204ENST00000477531 PSG3Q16557 428 aa11.23□□□□□ -0.61
CLDN11-204ENST00000477531 PATE2Q6UY27 113 aa11.23□□□□□ -0.61
CLDN11-204ENST00000477531 Q6ZRG5 221 aa11.23□□□□□ -0.61
CLDN11-204ENST00000477531 LINC00305Q7Z4B0 112 aa11.23□□□□□ -0.61
CLDN11-204ENST00000477531 C2orf50Q96LR7 162 aa11.23□□□□□ -0.61
CLDN11-204ENST00000477531 SEC22CQ9BRL7 303 aa11.23□□□□□ -0.61
CLDN11-204ENST00000477531 BOLA2-SMG1P6H3BVE0 249 aa11.22□□□□□ -0.61
CLDN11-204ENST00000477531 HTN3P15516 51 aa11.22□□□□□ -0.61
CLDN11-204ENST00000477531 CXCL2P19875 107 aa11.22□□□□□ -0.61
CLDN11-204ENST00000477531 CXCL3P19876 107 aa11.22□□□□□ -0.61
CLDN11-204ENST00000477531 DAD1P61803 113 aa11.22□□□□□ -0.61
CLDN11-204ENST00000477531 LCN15Q6UWW0 184 aa11.22□□□□□ -0.61
CLDN11-204ENST00000477531 BPIFA4PQ86YQ2 179 aa11.22□□□□□ -0.61
CLDN11-204ENST00000477531 POM121L12Q8N7R1 296 aa11.22□□□□□ -0.61
CLDN11-204ENST00000477531 OR8A1Q8NGG7 326 aa11.22□□□□□ -0.61
CLDN11-204ENST00000477531 CST7O76096 145 aa11.21□□□□□ -0.61
CLDN11-204ENST00000477531 CAMLGP49069 296 aa11.21□□□□□ -0.61
CLDN11-204ENST00000477531 S100A10P60903 97 aa11.21□□□□□ -0.61
CLDN11-204ENST00000477531 C10orf113Q5VZT2 155 aa11.21□□□□□ -0.61
CLDN11-204ENST00000477531 MGST2Q99735 147 aa11.21□□□□□ -0.61
CLDN11-204ENST00000477531 SLC50A1Q9BRV3 221 aa11.21□□□□□ -0.61
CLDN11-204ENST00000477531 UQCC1Q9NVA1 299 aa11.21□□□□□ -0.61
CLDN11-204ENST00000477531 ZNF705GA8MUZ8 300 aaPredicted RBP11.2□□□□□ -0.62
CLDN11-204ENST00000477531 PTTG1O95997 202 aa11.2□□□□□ -0.62
CLDN11-204ENST00000477531 NRARPQ7Z6K4 114 aa11.2□□□□□ -0.62
CLDN11-204ENST00000477531 STX12Q86Y82 276 aa11.2□□□□□ -0.62
CLDN11-204ENST00000477531 UBE2DNLQ8IWF7 75 aa11.2□□□□□ -0.62
CLDN11-204ENST00000477531 TMEM256Q8N2U0 113 aa11.2□□□□□ -0.62
CLDN11-204ENST00000477531 OR1L4Q8NGR5 311 aa11.2□□□□□ -0.62
CLDN11-204ENST00000477531 RPUSD4Q96CM3 377 aaKnown RBP11.2□□□□□ -0.62
CLDN11-204ENST00000477531 LINC01587Q99440 93 aa11.2□□□□□ -0.62
CLDN11-204ENST00000477531 DNAJC4Q9NNZ3 241 aa11.2□□□□□ -0.62
CLDN11-204ENST00000477531 PLA2G2EQ9NZK7 142 aa11.2□□□□□ -0.62
CLDN11-204ENST00000477531 TRAV12-2A0A075B6T6 113 aa11.19□□□□□ -0.62
CLDN11-204ENST00000477531 FAM24AA6NFZ4 105 aa11.19□□□□□ -0.62
CLDN11-204ENST00000477531 LYRM9A8MSI8 78 aa11.19□□□□□ -0.62
CLDN11-204ENST00000477531 CRXO43186 299 aaPredicted RBP11.19□□□□□ -0.62
CLDN11-204ENST00000477531 S100A11P31949 105 aa11.19□□□□□ -0.62
CLDN11-204ENST00000477531 HBG1P69891 147 aa11.19□□□□□ -0.62
CLDN11-204ENST00000477531 HBG2P69892 147 aa11.19□□□□□ -0.62
CLDN11-204ENST00000477531 BAP18Q8IXM2 172 aa11.19□□□□□ -0.62
CLDN11-204ENST00000477531 PFDN5Q99471 154 aa11.19□□□□□ -0.62
CLDN11-204ENST00000477531 PXMP4Q9Y6I8 212 aa11.19□□□□□ -0.62
CLDN11-204ENST00000477531 MRPS12O15235 138 aaKnown RBP11.18□□□□□ -0.62
CLDN11-204ENST00000477531 TSPOP30536 169 aa11.18□□□□□ -0.62
CLDN11-204ENST00000477531 SULT1A1P50225 295 aa11.18□□□□□ -0.62
CLDN11-204ENST00000477531 BAXQ07812 192 aa11.18□□□□□ -0.62
CLDN11-204ENST00000477531 OR10J6PQ8NGY7 276 aa11.18□□□□□ -0.62
CLDN11-204ENST00000477531 TMEM37Q8WXS4 190 aa11.18□□□□□ -0.62
CLDN11-204ENST00000477531 GPN1Q9HCN4 374 aaPredicted RBP11.18□□□□□ -0.62
CLDN11-204ENST00000477531 ZNF331Q9NQX6 463 aaPredicted RBP11.18□□□□□ -0.62
CLDN11-204ENST00000477531 LYRM2Q9NU23 88 aaPredicted RBP11.18□□□□□ -0.62
CLDN11-204ENST00000477531 SNRPCP09234 159 aaKnown RBP11.17□□□□□ -0.62
CLDN11-204ENST00000477531 CDKN1BP46527 198 aa11.17□□□□□ -0.62
CLDN11-204ENST00000477531 RAB32Q13637 225 aa11.17□□□□□ -0.62
CLDN11-204ENST00000477531 OPCMLQ14982 345 aa11.17□□□□□ -0.62
CLDN11-204ENST00000477531 ATP6V1FQ16864 119 aa11.17□□□□□ -0.62
CLDN11-204ENST00000477531 RGS21Q2M5E4 152 aa11.17□□□□□ -0.62
CLDN11-204ENST00000477531 MIC13Q5XKP0 118 aa11.17□□□□□ -0.62
CLDN11-204ENST00000477531 WDR83OSQ9Y284 106 aa11.17□□□□□ -0.62
CLDN11-204ENST00000477531 UBE2L5PA0A1B0GUS4 154 aa11.16□□□□□ -0.62
CLDN11-204ENST00000477531 HTN1P15515 57 aa11.16□□□□□ -0.62
CLDN11-204ENST00000477531 TAS2R60P59551 318 aa11.16□□□□□ -0.62
CLDN11-204ENST00000477531 GUK1Q16774 197 aa11.16□□□□□ -0.62
CLDN11-204ENST00000477531 LINC00336Q6ZUF6 198 aa11.16□□□□□ -0.62
CLDN11-204ENST00000477531 TMEM252Q8N6L7 170 aa11.16□□□□□ -0.62
CLDN11-204ENST00000477531 C11orf1Q9H5F2 150 aa11.16□□□□□ -0.62
CLDN11-204ENST00000477531 PRAF2O60831 178 aa11.15□□□□□ -0.62
CLDN11-204ENST00000477531 RLN2P04090 185 aa11.15□□□□□ -0.62
CLDN11-204ENST00000477531 PRM2P04554 102 aa11.15□□□□□ -0.62
CLDN11-204ENST00000477531 DEFB130BP0DP73 79 aa11.15□□□□□ -0.62
CLDN11-204ENST00000477531 DEFB130AP0DP74 79 aa11.15□□□□□ -0.62
CLDN11-204ENST00000477531 RPL29P47914 159 aaKnown RBP11.15□□□□□ -0.62
CLDN11-204ENST00000477531 VWC2Q2TAL6 325 aa11.15□□□□□ -0.62
CLDN11-204ENST00000477531 TMEM88Q6PEY1 159 aa11.15□□□□□ -0.62
CLDN11-204ENST00000477531 C15orf53Q8NAA6 179 aa11.15□□□□□ -0.62
CLDN11-204ENST00000477531 C16orf74Q96GX8 76 aa11.15□□□□□ -0.62
CLDN11-204ENST00000477531 MARVELD1Q9BSK0 173 aa11.15□□□□□ -0.62
CLDN11-204ENST00000477531 SLC39A9Q9NUM3 307 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms