RNA–Protein interactions for RNA: ENST00000476972.6

GMDS-204, Transcript of GDP-mannose 4,6-dehydratase, human

TSL 2

Gene GMDS, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GMDS-204	ENST00000476972	PRR20E	P86478	221 aa		13.73	□□□□□ -0.21
GMDS-204	ENST00000476972	PRR20C	P86479	221 aa		13.73	□□□□□ -0.21
GMDS-204	ENST00000476972	PRR20D	P86480	221 aa		13.73	□□□□□ -0.21
GMDS-204	ENST00000476972	PRR20B	P86481	221 aa		13.73	□□□□□ -0.21
GMDS-204	ENST00000476972	PRR20A	P86496	221 aa		13.73	□□□□□ -0.21
GMDS-204	ENST00000476972	C10orf113	Q5VZT2	155 aa		13.73	□□□□□ -0.21
GMDS-204	ENST00000476972	AMTN	Q6UX39	209 aa		13.73	□□□□□ -0.21
GMDS-204	ENST00000476972	ZNF738	Q8NE65	137 aa		13.73	□□□□□ -0.21
GMDS-204	ENST00000476972	OR5AC2	Q9NZP5	309 aa		13.73	□□□□□ -0.21
GMDS-204	ENST00000476972	IGHV3OR16-12	A0A075B7B8	117 aa		13.72	□□□□□ -0.21
GMDS-204	ENST00000476972	ZNF705F	A8MVS1	300 aa	Predicted RBP	13.72	□□□□□ -0.21
GMDS-204	ENST00000476972	ZNF705D	P0CH99	300 aa	Predicted RBP	13.72	□□□□□ -0.21
GMDS-204	ENST00000476972	ZNF705B	P0CI00	300 aa	Predicted RBP	13.72	□□□□□ -0.21
GMDS-204	ENST00000476972	CXCL3	P19876	107 aa		13.72	□□□□□ -0.21
GMDS-204	ENST00000476972	FGF7	P21781	194 aa		13.72	□□□□□ -0.21
GMDS-204	ENST00000476972	CNN1	P51911	297 aa	Known RBP	13.72	□□□□□ -0.21
GMDS-204	ENST00000476972	OPCML	Q14982	345 aa		13.72	□□□□□ -0.21
GMDS-204	ENST00000476972	CELA1	Q9UNI1	258 aa		13.72	□□□□□ -0.21
GMDS-204	ENST00000476972		E5RGE8	158 aa		13.71	□□□□□ -0.21
GMDS-204	ENST00000476972		H0YIZ8	118 aa		13.71	□□□□□ -0.21
GMDS-204	ENST00000476972	RLN2	P04090	185 aa		13.71	□□□□□ -0.21
GMDS-204	ENST00000476972	CXCL2	P19875	107 aa		13.71	□□□□□ -0.21
GMDS-204	ENST00000476972	B2M	P61769	119 aa		13.71	□□□□□ -0.21
GMDS-204	ENST00000476972	ATP6V1F	Q16864	119 aa		13.71	□□□□□ -0.21
GMDS-204	ENST00000476972		Q6ZRG5	221 aa		13.71	□□□□□ -0.21
GMDS-204	ENST00000476972	BPIFA4P	Q86YQ2	179 aa		13.71	□□□□□ -0.21
GMDS-204	ENST00000476972	LRRC20	Q8TCA0	184 aa		13.71	□□□□□ -0.21
GMDS-204	ENST00000476972	NEU1	Q99519	415 aa		13.71	□□□□□ -0.21
GMDS-204	ENST00000476972	DNAJC4	Q9NNZ3	241 aa		13.71	□□□□□ -0.21
GMDS-204	ENST00000476972	HECTD4	Q9Y4D8	3996 aa		13.71	□□□□□ -0.21
GMDS-204	ENST00000476972	KIAA1109	Q2LD37	5005 aa		13.71	□□□□□ -0.22
GMDS-204	ENST00000476972	SSNA1	O43805	119 aa		13.7	□□□□□ -0.22
GMDS-204	ENST00000476972	DUSP14	O95147	198 aa	Known RBP	13.7	□□□□□ -0.22
GMDS-204	ENST00000476972	SNRPC	P09234	159 aa	Known RBP	13.7	□□□□□ -0.22
GMDS-204	ENST00000476972	RPL29	P47914	159 aa	Known RBP	13.7	□□□□□ -0.22
GMDS-204	ENST00000476972	CYCS	P99999	105 aa	Known RBP	13.7	□□□□□ -0.22
GMDS-204	ENST00000476972	NHLH2	Q02577	135 aa		13.7	□□□□□ -0.22
GMDS-204	ENST00000476972	LCN15	Q6UWW0	184 aa		13.7	□□□□□ -0.22
GMDS-204	ENST00000476972	OR11H7	Q8NGC8	314 aa		13.7	□□□□□ -0.22
GMDS-204	ENST00000476972	OR1L4	Q8NGR5	311 aa		13.7	□□□□□ -0.22
GMDS-204	ENST00000476972	C2CD4C	Q8TF44	421 aa		13.7	□□□□□ -0.22
GMDS-204	ENST00000476972	PFDN5	Q99471	154 aa		13.7	□□□□□ -0.22
GMDS-204	ENST00000476972	SLC39A9	Q9NUM3	307 aa		13.7	□□□□□ -0.22
GMDS-204	ENST00000476972	PXMP4	Q9Y6I8	212 aa		13.7	□□□□□ -0.22
GMDS-204	ENST00000476972	PSG3	Q16557	428 aa		13.69	□□□□□ -0.22
GMDS-204	ENST00000476972		Q6ZTC4	211 aa		13.69	□□□□□ -0.22
GMDS-204	ENST00000476972	C1orf158	Q8N1D5	194 aa		13.69	□□□□□ -0.22
GMDS-204	ENST00000476972	OR5C1	Q8NGR4	320 aa		13.69	□□□□□ -0.22
GMDS-204	ENST00000476972	CHAC2	Q8WUX2	184 aa		13.69	□□□□□ -0.22
GMDS-204	ENST00000476972	PPP1R1C	Q8WVI7	109 aa		13.69	□□□□□ -0.22
GMDS-204	ENST00000476972	SLC25A31	Q9H0C2	315 aa		13.69	□□□□□ -0.22
GMDS-204	ENST00000476972	ZNF331	Q9NQX6	463 aa	Predicted RBP	13.69	□□□□□ -0.22
GMDS-204	ENST00000476972	GOLT1B	Q9Y3E0	138 aa		13.69	□□□□□ -0.22
GMDS-204	ENST00000476972	TRAV5	A0A0B4J249	113 aa		13.68	□□□□□ -0.22
GMDS-204	ENST00000476972	SMIM9	A6NGZ8	99 aa		13.68	□□□□□ -0.22
GMDS-204	ENST00000476972	C11orf94	C9JXX5	98 aa		13.68	□□□□□ -0.22
GMDS-204	ENST00000476972		H3BTX0	84 aa		13.68	□□□□□ -0.22
GMDS-204	ENST00000476972		M0R2Z0	102 aa		13.68	□□□□□ -0.22
GMDS-204	ENST00000476972	SLC17A3	O00476	420 aa		13.68	□□□□□ -0.22
GMDS-204	ENST00000476972	MPDU1	O75352	247 aa		13.68	□□□□□ -0.22
GMDS-204	ENST00000476972	IGLC2	P0DOY2	106 aa		13.68	□□□□□ -0.22
GMDS-204	ENST00000476972	PRB4	P10163	310 aa	Predicted RBP	13.68	□□□□□ -0.22
GMDS-204	ENST00000476972	HIST1H1A	Q02539	215 aa	Predicted RBP	13.68	□□□□□ -0.22
GMDS-204	ENST00000476972	SPINK13	Q1W4C9	94 aa		13.68	□□□□□ -0.22
GMDS-204	ENST00000476972	OR8A1	Q8NGG7	326 aa		13.68	□□□□□ -0.22
GMDS-204	ENST00000476972	THAP6	Q8TBB0	222 aa		13.68	□□□□□ -0.22
GMDS-204	ENST00000476972	SLC50A1	Q9BRV3	221 aa		13.68	□□□□□ -0.22
GMDS-204	ENST00000476972	NPCDR1	Q9BY65	106 aa		13.68	□□□□□ -0.22
GMDS-204	ENST00000476972	CLINT1	Q14677	625 aa		13.67	□□□□□ -0.22
GMDS-204	ENST00000476972	ZNF767P	Q75MW2	155 aa		13.67	□□□□□ -0.22
GMDS-204	ENST00000476972	IGF2BP2-AS1	Q96M15	143 aa		13.67	□□□□□ -0.22
GMDS-204	ENST00000476972	APLN	Q9ULZ1	77 aa		13.67	□□□□□ -0.22
GMDS-204	ENST00000476972	RFNG	Q9Y644	331 aa		13.67	□□□□□ -0.22
GMDS-204	ENST00000476972	IGLL5	B9A064	214 aa		13.66	□□□□□ -0.22
GMDS-204	ENST00000476972		H3BQ15	152 aa		13.66	□□□□□ -0.22
GMDS-204	ENST00000476972	BOLA2-SMG1P6	H3BVE0	249 aa		13.66	□□□□□ -0.22
GMDS-204	ENST00000476972	AMBP	P02760	352 aa		13.66	□□□□□ -0.22
GMDS-204	ENST00000476972	EMP1	P54849	157 aa		13.66	□□□□□ -0.22
GMDS-204	ENST00000476972	TCTA	P57738	103 aa		13.66	□□□□□ -0.22
GMDS-204	ENST00000476972	C12orf74	Q32Q52	190 aa		13.66	□□□□□ -0.22
GMDS-204	ENST00000476972	RPUSD4	Q96CM3	377 aa	Known RBP	13.66	□□□□□ -0.22
GMDS-204	ENST00000476972	TRAV10	A0A0B4J240	114 aa		13.65	□□□□□ -0.22
GMDS-204	ENST00000476972	TMEM189	A5PLL7	270 aa		13.65	□□□□□ -0.22
GMDS-204	ENST00000476972	CRX	O43186	299 aa	Predicted RBP	13.65	□□□□□ -0.22
GMDS-204	ENST00000476972	INS	P01308	110 aa		13.65	□□□□□ -0.22
GMDS-204	ENST00000476972	BAP18	Q8IXM2	172 aa		13.65	□□□□□ -0.22
GMDS-204	ENST00000476972	RNF126	Q9BV68	326 aa		13.65	□□□□□ -0.22
GMDS-204	ENST00000476972	DNAH2	Q9P225	4427 aa		13.64	□□□□□ -0.23
GMDS-204	ENST00000476972	MPC2	O95563	127 aa		13.64	□□□□□ -0.23
GMDS-204	ENST00000476972	HBE1	P02100	147 aa		13.64	□□□□□ -0.23
GMDS-204	ENST00000476972	PET100	P0DJ07	73 aa		13.64	□□□□□ -0.23
GMDS-204	ENST00000476972	RHOB	P62745	196 aa		13.64	□□□□□ -0.23
GMDS-204	ENST00000476972	GCSAML	Q5JQS6	135 aa		13.64	□□□□□ -0.23
GMDS-204	ENST00000476972	SAT2	Q96F10	170 aa	Predicted RBP	13.64	□□□□□ -0.23
GMDS-204	ENST00000476972	TMEM208	Q9BTX3	173 aa		13.64	□□□□□ -0.23
GMDS-204	ENST00000476972	ALG5	Q9Y673	324 aa		13.64	□□□□□ -0.23
GMDS-204	ENST00000476972	PCLO	Q9Y6V0	5065 aa		13.64	□□□□□ -0.23
GMDS-204	ENST00000476972	TRAV12-2	A0A075B6T6	113 aa		13.63	□□□□□ -0.23
GMDS-204	ENST00000476972	LOC102723971	A0A1B0GUV8	181 aa		13.63	□□□□□ -0.23
GMDS-204	ENST00000476972	PTTG1	O95997	202 aa		13.63	□□□□□ -0.23

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