RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 LCN15Q6UWW0 184 aa11.71□□□□□ -0.53
COL1A1-205ENST00000476387 RNF182Q8N6D2 247 aa11.71□□□□□ -0.53
COL1A1-205ENST00000476387 C2CD4CQ8TF44 421 aa11.71□□□□□ -0.53
COL1A1-205ENST00000476387 DNAJC4Q9NNZ3 241 aa11.71□□□□□ -0.53
COL1A1-205ENST00000476387 OR5AC2Q9NZP5 309 aa11.71□□□□□ -0.53
COL1A1-205ENST00000476387 TRAV8-2A0A0B4J237 113 aa11.7□□□□□ -0.54
COL1A1-205ENST00000476387 MPDU1O75352 247 aa11.7□□□□□ -0.54
COL1A1-205ENST00000476387 DUSP14O95147 198 aaKnown RBP11.7□□□□□ -0.54
COL1A1-205ENST00000476387 RBMY1A1P0DJD3 496 aaKnown RBP11.7□□□□□ -0.54
COL1A1-205ENST00000476387 RBMY1CP0DJD4 496 aa11.7□□□□□ -0.54
COL1A1-205ENST00000476387 CXCL2P19875 107 aa11.7□□□□□ -0.54
COL1A1-205ENST00000476387 RPL29P47914 159 aaKnown RBP11.7□□□□□ -0.54
COL1A1-205ENST00000476387 PRR20EP86478 221 aa11.7□□□□□ -0.54
COL1A1-205ENST00000476387 PRR20CP86479 221 aa11.7□□□□□ -0.54
COL1A1-205ENST00000476387 PRR20DP86480 221 aa11.7□□□□□ -0.54
COL1A1-205ENST00000476387 PRR20BP86481 221 aa11.7□□□□□ -0.54
COL1A1-205ENST00000476387 PRR20AP86496 221 aa11.7□□□□□ -0.54
COL1A1-205ENST00000476387 RBMY1FQ15415 496 aaKnown RBP11.7□□□□□ -0.54
COL1A1-205ENST00000476387 RPP25LQ8N5L8 163 aaKnown RBP11.7□□□□□ -0.54
COL1A1-205ENST00000476387 ZNF709Q8N972 641 aa11.7□□□□□ -0.54
COL1A1-205ENST00000476387 OR5C1Q8NGR4 320 aa11.7□□□□□ -0.54
COL1A1-205ENST00000476387 PPP1R1CQ8WVI7 109 aa11.7□□□□□ -0.54
COL1A1-205ENST00000476387 TMEM37Q8WXS4 190 aa11.7□□□□□ -0.54
COL1A1-205ENST00000476387 SLC35B3Q9H1N7 401 aa11.7□□□□□ -0.54
COL1A1-205ENST00000476387 SLC39A9Q9NUM3 307 aa11.7□□□□□ -0.54
COL1A1-205ENST00000476387 IGHV3OR16-12A0A075B7B8 117 aa11.69□□□□□ -0.54
COL1A1-205ENST00000476387 NHLH2Q02577 135 aa11.69□□□□□ -0.54
COL1A1-205ENST00000476387 SLC50A1Q9BRV3 221 aa11.69□□□□□ -0.54
COL1A1-205ENST00000476387 GOLT1BQ9Y3E0 138 aa11.69□□□□□ -0.54
COL1A1-205ENST00000476387 PXMP4Q9Y6I8 212 aa11.69□□□□□ -0.54
COL1A1-205ENST00000476387 H0YIZ8 118 aa11.68□□□□□ -0.54
COL1A1-205ENST00000476387 MRPS12O15235 138 aaKnown RBP11.68□□□□□ -0.54
COL1A1-205ENST00000476387 PTTG1O95997 202 aa11.68□□□□□ -0.54
COL1A1-205ENST00000476387 CXCL3P19876 107 aa11.68□□□□□ -0.54
COL1A1-205ENST00000476387 CNN1P51911 297 aaKnown RBP11.68□□□□□ -0.54
COL1A1-205ENST00000476387 CLINT1Q14677 625 aa11.68□□□□□ -0.54
COL1A1-205ENST00000476387 PSG3Q16557 428 aa11.68□□□□□ -0.54
COL1A1-205ENST00000476387 ZNF705AQ6ZN79 300 aaPredicted RBP11.68□□□□□ -0.54
COL1A1-205ENST00000476387 CHAC2Q8WUX2 184 aa11.68□□□□□ -0.54
COL1A1-205ENST00000476387 NPCDR1Q9BY65 106 aa11.68□□□□□ -0.54
COL1A1-205ENST00000476387 FRAS1Q86XX4 4008 aa11.68□□□□□ -0.54
COL1A1-205ENST00000476387 A8MTW9 85 aa11.67□□□□□ -0.54
COL1A1-205ENST00000476387 AMBPP02760 352 aa11.67□□□□□ -0.54
COL1A1-205ENST00000476387 HLA-DMBP28068 263 aa11.67□□□□□ -0.54
COL1A1-205ENST00000476387 MORN5Q5VZ52 161 aa11.67□□□□□ -0.54
COL1A1-205ENST00000476387 THAP6Q8TBB0 222 aa11.67□□□□□ -0.54
COL1A1-205ENST00000476387 NEU1Q99519 415 aa11.67□□□□□ -0.54
COL1A1-205ENST00000476387 KCNIP2Q9NS61 270 aa11.67□□□□□ -0.54
COL1A1-205ENST00000476387 SMIM9A6NGZ8 99 aa11.66□□□□□ -0.54
COL1A1-205ENST00000476387 ZNF705FA8MVS1 300 aaPredicted RBP11.66□□□□□ -0.54
COL1A1-205ENST00000476387 MPC2O95563 127 aa11.66□□□□□ -0.54
COL1A1-205ENST00000476387 SNRPCP09234 159 aaKnown RBP11.66□□□□□ -0.54
COL1A1-205ENST00000476387 ZNF705DP0CH99 300 aaPredicted RBP11.66□□□□□ -0.54
COL1A1-205ENST00000476387 ZNF705BP0CI00 300 aaPredicted RBP11.66□□□□□ -0.54
COL1A1-205ENST00000476387 HIST1H1AQ02539 215 aaPredicted RBP11.66□□□□□ -0.54
COL1A1-205ENST00000476387 OR11H7Q8NGC8 314 aa11.66□□□□□ -0.54
COL1A1-205ENST00000476387 OR8A1Q8NGG7 326 aa11.66□□□□□ -0.54
COL1A1-205ENST00000476387 RPUSD4Q96CM3 377 aaKnown RBP11.66□□□□□ -0.54
COL1A1-205ENST00000476387 TMEM208Q9BTX3 173 aa11.66□□□□□ -0.54
COL1A1-205ENST00000476387 ZNF331Q9NQX6 463 aaPredicted RBP11.66□□□□□ -0.54
COL1A1-205ENST00000476387 PPP1R14DQ9NXH3 145 aa11.66□□□□□ -0.54
COL1A1-205ENST00000476387 ALG5Q9Y673 324 aa11.66□□□□□ -0.54
COL1A1-205ENST00000476387 TMEM189A5PLL7 270 aa11.65□□□□□ -0.54
COL1A1-205ENST00000476387 IGLL5B9A064 214 aa11.65□□□□□ -0.54
COL1A1-205ENST00000476387 IGLC2P0DOY2 106 aa11.65□□□□□ -0.54
COL1A1-205ENST00000476387 RHOBP62745 196 aa11.65□□□□□ -0.54
COL1A1-205ENST00000476387 GUK1Q16774 197 aa11.65□□□□□ -0.54
COL1A1-205ENST00000476387 SPINK13Q1W4C9 94 aa11.65□□□□□ -0.54
COL1A1-205ENST00000476387 AMTNQ6UX39 209 aa11.65□□□□□ -0.54
COL1A1-205ENST00000476387 IGF2BP2-AS1Q96M15 143 aa11.65□□□□□ -0.54
COL1A1-205ENST00000476387 MBD2Q9UBB5 411 aa11.65□□□□□ -0.54
COL1A1-205ENST00000476387 APLNQ9ULZ1 77 aa11.65□□□□□ -0.54
COL1A1-205ENST00000476387 RFNGQ9Y644 331 aa11.65□□□□□ -0.54
COL1A1-205ENST00000476387 TRAV10A0A0B4J240 114 aa11.64□□□□□ -0.55
COL1A1-205ENST00000476387 TRAV5A0A0B4J249 113 aa11.64□□□□□ -0.55
COL1A1-205ENST00000476387 H3BTX0 84 aa11.64□□□□□ -0.55
COL1A1-205ENST00000476387 BOLA2-SMG1P6H3BVE0 249 aa11.64□□□□□ -0.55
COL1A1-205ENST00000476387 M0R2Z0 102 aa11.64□□□□□ -0.55
COL1A1-205ENST00000476387 SLC17A3O00476 420 aa11.64□□□□□ -0.55
COL1A1-205ENST00000476387 INSP01308 110 aa11.64□□□□□ -0.55
COL1A1-205ENST00000476387 HBE1P02100 147 aa11.64□□□□□ -0.55
COL1A1-205ENST00000476387 ATP5SQ99766 215 aa11.64□□□□□ -0.55
COL1A1-205ENST00000476387 HSPB11Q9Y547 144 aa11.64□□□□□ -0.55
COL1A1-205ENST00000476387 C17orf112F2Z3M2 114 aa11.63□□□□□ -0.55
COL1A1-205ENST00000476387 RPL12P30050 165 aaKnown RBP11.63□□□□□ -0.55
COL1A1-205ENST00000476387 EMP1P54849 157 aa11.63□□□□□ -0.55
COL1A1-205ENST00000476387 Q6ZTC4 211 aa11.63□□□□□ -0.55
COL1A1-205ENST00000476387 RNF126Q9BV68 326 aa11.63□□□□□ -0.55
COL1A1-205ENST00000476387 WDR61Q9GZS3 305 aaKnown RBP11.63□□□□□ -0.55
COL1A1-205ENST00000476387 CELA1Q9UNI1 258 aa11.63□□□□□ -0.55
COL1A1-205ENST00000476387 H3BQ15 152 aa11.62□□□□□ -0.55
COL1A1-205ENST00000476387 RRN3P1Q2M238 152 aa11.62□□□□□ -0.55
COL1A1-205ENST00000476387 C1orf158Q8N1D5 194 aa11.62□□□□□ -0.55
COL1A1-205ENST00000476387 OR10J6PQ8NGY7 276 aa11.62□□□□□ -0.55
COL1A1-205ENST00000476387 TEX48A0A1B0GUV7 120 aa11.61□□□□□ -0.55
COL1A1-205ENST00000476387 LOC102723971A0A1B0GUV8 181 aa11.61□□□□□ -0.55
COL1A1-205ENST00000476387 ZNF253O75346 499 aa11.61□□□□□ -0.55
COL1A1-205ENST00000476387 IFNA5P01569 189 aa11.61□□□□□ -0.55
COL1A1-205ENST00000476387 SPART-AS1P0CW21 52 aa11.61□□□□□ -0.55
COL1A1-205ENST00000476387 GCSAMLQ5JQS6 135 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms