RNA–Protein interactions for RNA: ENST00000475580.5

VPS8-222, Transcript of VPS8, CORVET complex subunit, human

TSL 2

Gene VPS8, Length 318 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS8-222	ENST00000475580	RLN2	P04090	185 aa		11.95	□□□□□ -0.5
VPS8-222	ENST00000475580	CXCL3	P19876	107 aa		11.95	□□□□□ -0.5
VPS8-222	ENST00000475580	PSG9	Q00887	426 aa		11.95	□□□□□ -0.5
VPS8-222	ENST00000475580	PHLDA1	Q8WV24	401 aa	Predicted RBP	11.95	□□□□□ -0.5
VPS8-222	ENST00000475580	DNAJC4	Q9NNZ3	241 aa		11.95	□□□□□ -0.5
VPS8-222	ENST00000475580	SLC39A9	Q9NUM3	307 aa		11.95	□□□□□ -0.5
VPS8-222	ENST00000475580	ZNF705F	A8MVS1	300 aa	Predicted RBP	11.94	□□□□□ -0.5
VPS8-222	ENST00000475580	SNRPC	P09234	159 aa	Known RBP	11.94	□□□□□ -0.5
VPS8-222	ENST00000475580	ZNF705D	P0CH99	300 aa	Predicted RBP	11.94	□□□□□ -0.5
VPS8-222	ENST00000475580	ZNF705B	P0CI00	300 aa	Predicted RBP	11.94	□□□□□ -0.5
VPS8-222	ENST00000475580	FGF7	P21781	194 aa		11.94	□□□□□ -0.5
VPS8-222	ENST00000475580	B2M	P61769	119 aa		11.94	□□□□□ -0.5
VPS8-222	ENST00000475580		Q6ZRG5	221 aa		11.94	□□□□□ -0.5
VPS8-222	ENST00000475580	OR5C1	Q8NGR4	320 aa		11.94	□□□□□ -0.5
VPS8-222	ENST00000475580	SLC25A31	Q9H0C2	315 aa		11.94	□□□□□ -0.5
VPS8-222	ENST00000475580	RNF24	Q9Y225	148 aa		11.94	□□□□□ -0.5
VPS8-222	ENST00000475580	TRAV5	A0A0B4J249	113 aa		11.93	□□□□□ -0.5
VPS8-222	ENST00000475580	MPC2	O95563	127 aa		11.93	□□□□□ -0.5
VPS8-222	ENST00000475580	CNN1	P51911	297 aa	Known RBP	11.93	□□□□□ -0.5
VPS8-222	ENST00000475580	ZNF738	Q8NE65	137 aa		11.93	□□□□□ -0.5
VPS8-222	ENST00000475580	NEU1	Q99519	415 aa		11.93	□□□□□ -0.5
VPS8-222	ENST00000475580	NPCDR1	Q9BY65	106 aa		11.93	□□□□□ -0.5
VPS8-222	ENST00000475580	MFF	Q9GZY8	342 aa		11.93	□□□□□ -0.5
VPS8-222	ENST00000475580	HRH4	Q9H3N8	390 aa		11.93	□□□□□ -0.5
VPS8-222	ENST00000475580	ZNF331	Q9NQX6	463 aa	Predicted RBP	11.93	□□□□□ -0.5
VPS8-222	ENST00000475580	ALG5	Q9Y673	324 aa		11.93	□□□□□ -0.5
VPS8-222	ENST00000475580	PXMP4	Q9Y6I8	212 aa		11.93	□□□□□ -0.5
VPS8-222	ENST00000475580		H3BQ15	152 aa		11.92	□□□□□ -0.5
VPS8-222	ENST00000475580	SLC17A3	O00476	420 aa		11.92	□□□□□ -0.5
VPS8-222	ENST00000475580	MPDU1	O75352	247 aa		11.92	□□□□□ -0.5
VPS8-222	ENST00000475580	JTB	O76095	146 aa		11.92	□□□□□ -0.5
VPS8-222	ENST00000475580	PTTG1	O95997	202 aa		11.92	□□□□□ -0.5
VPS8-222	ENST00000475580	IGLC2	P0DOY2	106 aa		11.92	□□□□□ -0.5
VPS8-222	ENST00000475580	PRB4	P10163	310 aa	Predicted RBP	11.92	□□□□□ -0.5
VPS8-222	ENST00000475580	CXCL2	P19875	107 aa		11.92	□□□□□ -0.5
VPS8-222	ENST00000475580	CLINT1	Q14677	625 aa		11.92	□□□□□ -0.5
VPS8-222	ENST00000475580	PSG3	Q16557	428 aa		11.92	□□□□□ -0.5
VPS8-222	ENST00000475580	BPIFA4P	Q86YQ2	179 aa		11.92	□□□□□ -0.5
VPS8-222	ENST00000475580	C1orf158	Q8N1D5	194 aa		11.92	□□□□□ -0.5
VPS8-222	ENST00000475580	OR1L4	Q8NGR5	311 aa		11.92	□□□□□ -0.5
VPS8-222	ENST00000475580	THAP6	Q8TBB0	222 aa		11.92	□□□□□ -0.5
VPS8-222	ENST00000475580		H3BTX0	84 aa		11.91	□□□□□ -0.5
VPS8-222	ENST00000475580	GCSAML	Q5JQS6	135 aa		11.91	□□□□□ -0.5
VPS8-222	ENST00000475580	LCN15	Q6UWW0	184 aa		11.91	□□□□□ -0.5
VPS8-222	ENST00000475580	OR11H7	Q8NGC8	314 aa		11.91	□□□□□ -0.5
VPS8-222	ENST00000475580	OR8A1	Q8NGG7	326 aa		11.91	□□□□□ -0.5
VPS8-222	ENST00000475580	PFDN5	Q99471	154 aa		11.91	□□□□□ -0.5
VPS8-222	ENST00000475580	CELA1	Q9UNI1	258 aa		11.91	□□□□□ -0.5
VPS8-222	ENST00000475580	CRX	O43186	299 aa	Predicted RBP	11.9	□□□□□ -0.5
VPS8-222	ENST00000475580	DUSP14	O95147	198 aa	Known RBP	11.9	□□□□□ -0.5
VPS8-222	ENST00000475580	SAT2	Q96F10	170 aa	Predicted RBP	11.9	□□□□□ -0.5
VPS8-222	ENST00000475580	SLC50A1	Q9BRV3	221 aa		11.9	□□□□□ -0.5
VPS8-222	ENST00000475580	WDR61	Q9GZS3	305 aa	Known RBP	11.9	□□□□□ -0.5
VPS8-222	ENST00000475580	KLK5	Q9Y337	293 aa	Predicted RBP	11.9	□□□□□ -0.5
VPS8-222	ENST00000475580	IGHV3OR16-12	A0A075B7B8	117 aa		11.89	□□□□□ -0.51
VPS8-222	ENST00000475580	LRRC20	Q8TCA0	184 aa		11.89	□□□□□ -0.51
VPS8-222	ENST00000475580	LINC00476	Q8WZB0	136 aa		11.89	□□□□□ -0.51
VPS8-222	ENST00000475580	RPUSD4	Q96CM3	377 aa	Known RBP	11.89	□□□□□ -0.51
VPS8-222	ENST00000475580	IGF2BP2-AS1	Q96M15	143 aa		11.89	□□□□□ -0.51
VPS8-222	ENST00000475580	MBD2	Q9UBB5	411 aa		11.89	□□□□□ -0.51
VPS8-222	ENST00000475580	HSPB11	Q9Y547	144 aa		11.89	□□□□□ -0.51
VPS8-222	ENST00000475580	SMIM9	A6NGZ8	99 aa		11.88	□□□□□ -0.51
VPS8-222	ENST00000475580		M0R2Z0	102 aa		11.88	□□□□□ -0.51
VPS8-222	ENST00000475580	PET100	P0DJ07	73 aa		11.88	□□□□□ -0.51
VPS8-222	ENST00000475580	HIST1H1A	Q02539	215 aa	Predicted RBP	11.88	□□□□□ -0.51
VPS8-222	ENST00000475580	SPINK13	Q1W4C9	94 aa		11.88	□□□□□ -0.51
VPS8-222	ENST00000475580	ATP5S	Q99766	215 aa		11.88	□□□□□ -0.51
VPS8-222	ENST00000475580	ZNF586	Q9NXT0	402 aa		11.88	□□□□□ -0.51
VPS8-222	ENST00000475580	TMEM14C	Q9P0S9	112 aa		11.88	□□□□□ -0.51
VPS8-222	ENST00000475580	PRAC2	D3DTV9	90 aa		11.87	□□□□□ -0.51
VPS8-222	ENST00000475580	RPL12	P30050	165 aa	Known RBP	11.87	□□□□□ -0.51
VPS8-222	ENST00000475580	FCN2	Q15485	313 aa		11.87	□□□□□ -0.51
VPS8-222	ENST00000475580	C12orf74	Q32Q52	190 aa		11.87	□□□□□ -0.51
VPS8-222	ENST00000475580		Q6ZTC4	211 aa		11.87	□□□□□ -0.51
VPS8-222	ENST00000475580	GOLT1B	Q9Y3E0	138 aa		11.87	□□□□□ -0.51
VPS8-222	ENST00000475580	BOLA2-SMG1P6	H3BVE0	249 aa		11.86	□□□□□ -0.51
VPS8-222	ENST00000475580	AMBP	P02760	352 aa		11.86	□□□□□ -0.51
VPS8-222	ENST00000475580	BAP18	Q8IXM2	172 aa		11.86	□□□□□ -0.51
VPS8-222	ENST00000475580	FAM167A-AS1	Q96KT0	104 aa		11.86	□□□□□ -0.51
VPS8-222	ENST00000475580	SLC25A2	Q9BXI2	301 aa		11.86	□□□□□ -0.51
VPS8-222	ENST00000475580	RFNG	Q9Y644	331 aa		11.86	□□□□□ -0.51
VPS8-222	ENST00000475580	TRBV19	A0A075B6N1	114 aa		11.85	□□□□□ -0.51
VPS8-222	ENST00000475580	C11orf94	C9JXX5	98 aa		11.85	□□□□□ -0.51
VPS8-222	ENST00000475580	ZNF253	O75346	499 aa		11.85	□□□□□ -0.51
VPS8-222	ENST00000475580	NDUFB4	O95168	129 aa		11.85	□□□□□ -0.51
VPS8-222	ENST00000475580	INS	P01308	110 aa		11.85	□□□□□ -0.51
VPS8-222	ENST00000475580	PYY	P10082	97 aa		11.85	□□□□□ -0.51
VPS8-222	ENST00000475580	GUK1	Q16774	197 aa		11.85	□□□□□ -0.51
VPS8-222	ENST00000475580	ZNF767P	Q75MW2	155 aa		11.85	□□□□□ -0.51
VPS8-222	ENST00000475580	MIR17HG	Q75NE6	70 aa		11.85	□□□□□ -0.51
VPS8-222	ENST00000475580	C2CD4C	Q8TF44	421 aa		11.85	□□□□□ -0.51
VPS8-222	ENST00000475580	SMIM3	Q9BZL3	60 aa		11.85	□□□□□ -0.51
VPS8-222	ENST00000475580	WFDC1	Q9HC57	220 aa		11.85	□□□□□ -0.51
VPS8-222	ENST00000475580	TRAV12-2	A0A075B6T6	113 aa		11.84	□□□□□ -0.51
VPS8-222	ENST00000475580	RHOB	P62745	196 aa		11.84	□□□□□ -0.51
VPS8-222	ENST00000475580	MED28	Q9H204	178 aa		11.84	□□□□□ -0.51
VPS8-222	ENST00000475580	KCNIP2	Q9NS61	270 aa		11.84	□□□□□ -0.51
VPS8-222	ENST00000475580	TRAV10	A0A0B4J240	114 aa		11.83	□□□□□ -0.52
VPS8-222	ENST00000475580	LOC102723971	A0A1B0GUV8	181 aa		11.83	□□□□□ -0.52
VPS8-222	ENST00000475580	TMEM189	A5PLL7	270 aa		11.83	□□□□□ -0.52

Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms