RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 CHRDL1Q9BU40 450 aa5.39□□□□□ -1.55
SHQ1-207ENST00000475558 AAMDCQ9H7C9 122 aa5.39□□□□□ -1.55
SHQ1-207ENST00000475558 SLC25A22Q9H936 323 aa5.39□□□□□ -1.55
SHQ1-207ENST00000475558 DAZ1Q9NQZ3 744 aaKnown RBP5.39□□□□□ -1.55
SHQ1-207ENST00000475558 TNCP24821 2201 aa5.39□□□□□ -1.55
SHQ1-207ENST00000475558 LOC102723971A0A1B0GUV8 181 aa5.38□□□□□ -1.55
SHQ1-207ENST00000475558 ZNF320A2RRD8 509 aa5.38□□□□□ -1.55
SHQ1-207ENST00000475558 ZNF785A8K8V0 405 aa5.38□□□□□ -1.55
SHQ1-207ENST00000475558 I3L521 148 aa5.38□□□□□ -1.55
SHQ1-207ENST00000475558 PAGE4O60829 102 aa5.38□□□□□ -1.55
SHQ1-207ENST00000475558 IGHV3-23P01764 117 aa5.38□□□□□ -1.55
SHQ1-207ENST00000475558 PRB2P02812 416 aaPredicted RBP5.38□□□□□ -1.55
SHQ1-207ENST00000475558 ARL14EPLP0DKL9 152 aa5.38□□□□□ -1.55
SHQ1-207ENST00000475558 MYCNOSP40205 109 aa5.38□□□□□ -1.55
SHQ1-207ENST00000475558 PAFAH1B2P68402 229 aa5.38□□□□□ -1.55
SHQ1-207ENST00000475558 CCL20P78556 96 aa5.38□□□□□ -1.55
SHQ1-207ENST00000475558 KLF5Q13887 457 aaPredicted RBP5.38□□□□□ -1.55
SHQ1-207ENST00000475558 TM4SF20Q53R12 229 aa5.38□□□□□ -1.55
SHQ1-207ENST00000475558 GCSAMLQ5JQS6 135 aa5.38□□□□□ -1.55
SHQ1-207ENST00000475558 CST9LP1Q5W188 147 aa5.38□□□□□ -1.55
SHQ1-207ENST00000475558 NDUFA11Q86Y39 141 aa5.38□□□□□ -1.55
SHQ1-207ENST00000475558 CMTM2Q8TAZ6 248 aa5.38□□□□□ -1.55
SHQ1-207ENST00000475558 FAM167A-AS1Q96KT0 104 aa5.38□□□□□ -1.55
SHQ1-207ENST00000475558 SLC50A1Q9BRV3 221 aa5.38□□□□□ -1.55
SHQ1-207ENST00000475558 C20orf24Q9BUV8 137 aa5.38□□□□□ -1.55
SHQ1-207ENST00000475558 SLC25A2Q9BXI2 301 aa5.38□□□□□ -1.55
SHQ1-207ENST00000475558 BIN3Q9NQY0 253 aa5.38□□□□□ -1.55
SHQ1-207ENST00000475558 DOK5Q9P104 306 aa5.38□□□□□ -1.55
SHQ1-207ENST00000475558 RFNGQ9Y644 331 aa5.38□□□□□ -1.55
SHQ1-207ENST00000475558 A0A087X0K7 114 aa5.37□□□□□ -1.55
SHQ1-207ENST00000475558 B4DEV8 164 aa5.37□□□□□ -1.55
SHQ1-207ENST00000475558 C11orf94C9JXX5 98 aa5.37□□□□□ -1.55
SHQ1-207ENST00000475558 F8W036 122 aa5.37□□□□□ -1.55
SHQ1-207ENST00000475558 IGHV3-11P01762 117 aa5.37□□□□□ -1.55
SHQ1-207ENST00000475558 SRP19P09132 144 aaKnown RBP5.37□□□□□ -1.55
SHQ1-207ENST00000475558 ID1P41134 155 aa5.37□□□□□ -1.55
SHQ1-207ENST00000475558 FGF8P55075 233 aaPredicted RBP5.37□□□□□ -1.55
SHQ1-207ENST00000475558 TAS2R60P59551 318 aa5.37□□□□□ -1.55
SHQ1-207ENST00000475558 SUMO1P63165 101 aaKnown RBP5.37□□□□□ -1.55
SHQ1-207ENST00000475558 UBE2L3P68036 154 aaKnown RBP5.37□□□□□ -1.55
SHQ1-207ENST00000475558 PNRC1Q12796 327 aaPredicted RBP5.37□□□□□ -1.55
SHQ1-207ENST00000475558 USF2Q15853 346 aaPredicted RBP5.37□□□□□ -1.55
SHQ1-207ENST00000475558 HAGHQ16775 308 aa5.37□□□□□ -1.55
SHQ1-207ENST00000475558 TOR2AQ5JU69 321 aa5.37□□□□□ -1.55
SHQ1-207ENST00000475558 C16orf54Q6UWD8 224 aa5.37□□□□□ -1.55
SHQ1-207ENST00000475558 LCNL1Q6ZST4 164 aa5.37□□□□□ -1.55
SHQ1-207ENST00000475558 SVBPQ8N300 66 aa5.37□□□□□ -1.55
SHQ1-207ENST00000475558 PCNPQ8WW12 178 aaKnown RBP5.37□□□□□ -1.55
SHQ1-207ENST00000475558 FXYD5Q96DB9 178 aa5.37□□□□□ -1.55
SHQ1-207ENST00000475558 SMIM12Q96EX1 92 aa5.37□□□□□ -1.55
SHQ1-207ENST00000475558 OTORQ9NRC9 128 aa5.37□□□□□ -1.55
SHQ1-207ENST00000475558 SIGLEC8Q9NYZ4 499 aa5.37□□□□□ -1.55
SHQ1-207ENST00000475558 SMPXQ9UHP9 88 aa5.37□□□□□ -1.55
SHQ1-207ENST00000475558 S4R3C0 116 aa5.37□□□□□ -1.55
SHQ1-207ENST00000475558 RYR3Q15413 4870 aa5.37□□□□□ -1.55
SHQ1-207ENST00000475558 TRBV19A0A075B6N1 114 aa5.36□□□□□ -1.55
SHQ1-207ENST00000475558 TRAV2A0A0B4J234 112 aa5.36□□□□□ -1.55
SHQ1-207ENST00000475558 TRAV25A0A0B4J276 109 aa5.36□□□□□ -1.55
SHQ1-207ENST00000475558 IGHV7-4-1A0A0J9YVY3 117 aa5.36□□□□□ -1.55
SHQ1-207ENST00000475558 PGPA6NDG6 321 aa5.36□□□□□ -1.55
SHQ1-207ENST00000475558 FAM74A7A6NL05 159 aa5.36□□□□□ -1.55
SHQ1-207ENST00000475558 A8MWP6 167 aa5.36□□□□□ -1.55
SHQ1-207ENST00000475558 PPP5D1E7EU14 171 aa5.36□□□□□ -1.55
SHQ1-207ENST00000475558 CCL24O00175 119 aa5.36□□□□□ -1.55
SHQ1-207ENST00000475558 SNAPINO95295 136 aa5.36□□□□□ -1.55
SHQ1-207ENST00000475558 RANP62826 216 aaKnown RBP5.36□□□□□ -1.55
SHQ1-207ENST00000475558 ICAM4Q14773 271 aa5.36□□□□□ -1.55
SHQ1-207ENST00000475558 TMEM241Q24JQ0 296 aa5.36□□□□□ -1.55
SHQ1-207ENST00000475558 C10orf91Q5T1B1 145 aa5.36□□□□□ -1.55
SHQ1-207ENST00000475558 SIGLEC15Q6ZMC9 328 aa5.36□□□□□ -1.55
SHQ1-207ENST00000475558 CCDC28AQ8IWP9 274 aa5.36□□□□□ -1.55
SHQ1-207ENST00000475558 C5orf17Q8NAS9 161 aa5.36□□□□□ -1.55
SHQ1-207ENST00000475558 OR11H1Q8NG94 326 aa5.36□□□□□ -1.55
SHQ1-207ENST00000475558 ANAPC16Q96DE5 110 aa5.36□□□□□ -1.55
SHQ1-207ENST00000475558 MRPL53Q96EL3 112 aaKnown RBP5.36□□□□□ -1.55
SHQ1-207ENST00000475558 ZNF414Q96IQ9 312 aa5.36□□□□□ -1.55
SHQ1-207ENST00000475558 RARRES2Q99969 163 aa5.36□□□□□ -1.55
SHQ1-207ENST00000475558 NIPSNAP3BQ9BS92 247 aa5.36□□□□□ -1.55
SHQ1-207ENST00000475558 SCRT1Q9BWW7 348 aa5.36□□□□□ -1.55
SHQ1-207ENST00000475558 MLXQ9UH92 298 aa5.36□□□□□ -1.55
SHQ1-207ENST00000475558 CARHSP1Q9Y2V2 147 aaKnown RBP5.36□□□□□ -1.55
SHQ1-207ENST00000475558 LY96Q9Y6Y9 160 aa5.36□□□□□ -1.55
SHQ1-207ENST00000475558 DNAH3Q8TD57 4116 aa5.35□□□□□ -1.55
SHQ1-207ENST00000475558 TRAV5A0A0B4J249 113 aa5.35□□□□□ -1.55
SHQ1-207ENST00000475558 A0A1B0GV50 99 aa5.35□□□□□ -1.55
SHQ1-207ENST00000475558 ZNF727A8MUV8 499 aa5.35□□□□□ -1.55
SHQ1-207ENST00000475558 CHEK1O14757 476 aa5.35□□□□□ -1.55
SHQ1-207ENST00000475558 ATP6V1G1O75348 118 aa5.35□□□□□ -1.55
SHQ1-207ENST00000475558 SLC25A5P05141 298 aaKnown RBP5.35□□□□□ -1.55
SHQ1-207ENST00000475558 OR10J4P0C629 311 aa5.35□□□□□ -1.55
SHQ1-207ENST00000475558 SFTA3P0C7M3 94 aa5.35□□□□□ -1.55
SHQ1-207ENST00000475558 IGLC2P0DOY2 106 aa5.35□□□□□ -1.55
SHQ1-207ENST00000475558 GP9P14770 177 aa5.35□□□□□ -1.55
SHQ1-207ENST00000475558 HOXD3P31249 432 aaPredicted RBP5.35□□□□□ -1.55
SHQ1-207ENST00000475558 CNN1P51911 297 aaKnown RBP5.35□□□□□ -1.55
SHQ1-207ENST00000475558 CD81P60033 236 aa5.35□□□□□ -1.55
SHQ1-207ENST00000475558 C21orf62-AS1Q17RA5 79 aa5.35□□□□□ -1.55
SHQ1-207ENST00000475558 KHDC1LQ5JSQ8 128 aa5.35□□□□□ -1.55
SHQ1-207ENST00000475558 SPATA31B1PQ5VZV4 182 aa5.35□□□□□ -1.55
SHQ1-207ENST00000475558 SSX7Q7RTT5 188 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms