RNA–Protein interactions for RNA: ENST00000475344.1

LTN1-204, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene LTN1, Length 696 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-204ENST00000475344 OR2J1Q9GZK6 312 aa0.56□□□□□ -2.32
LTN1-204ENST00000475344 SH3BGRL3Q9H299 93 aa0.56□□□□□ -2.32
LTN1-204ENST00000475344 SSR3Q9UNL2 185 aa0.56□□□□□ -2.32
LTN1-204ENST00000475344 COL24A1Q17RW2 1714 aa0.55□□□□□ -2.32
LTN1-204ENST00000475344 RIIAD1A6NNX1 92 aa0.55□□□□□ -2.32
LTN1-204ENST00000475344 F8W1H4 67 aa0.55□□□□□ -2.32
LTN1-204ENST00000475344 MFSD11O43934 449 aa0.55□□□□□ -2.32
LTN1-204ENST00000475344 TRGC2P03986 189 aa0.55□□□□□ -2.32
LTN1-204ENST00000475344 OR10J4P0C629 311 aa0.55□□□□□ -2.32
LTN1-204ENST00000475344 EFNA4P52798 201 aa0.55□□□□□ -2.32
LTN1-204ENST00000475344 GNG3P63215 75 aa0.55□□□□□ -2.32
LTN1-204ENST00000475344 SCGB2B2Q4G0G5 96 aa0.55□□□□□ -2.32
LTN1-204ENST00000475344 OR5D16Q8NGK9 328 aa0.55□□□□□ -2.32
LTN1-204ENST00000475344 OR13C6PQ8NH95 151 aa0.55□□□□□ -2.32
LTN1-204ENST00000475344 ZNF714Q96N38 554 aa0.55□□□□□ -2.32
LTN1-204ENST00000475344 LYRM2Q9NU23 88 aaPredicted RBP0.55□□□□□ -2.32
LTN1-204ENST00000475344 STOML2Q9UJZ1 356 aa0.55□□□□□ -2.32
LTN1-204ENST00000475344 CECR2Q9BXF3 1484 aa0.54□□□□□ -2.32
LTN1-204ENST00000475344 USP24Q9UPU5 2620 aa0.54□□□□□ -2.32
LTN1-204ENST00000475344 CSN2P05814 226 aa0.54□□□□□ -2.32
LTN1-204ENST00000475344 CXCL8P10145 99 aa0.54□□□□□ -2.32
LTN1-204ENST00000475344 OGNP20774 298 aaKnown RBP0.54□□□□□ -2.32
LTN1-204ENST00000475344 RAB5CP51148 216 aa0.54□□□□□ -2.32
LTN1-204ENST00000475344 TAS2R41P59536 307 aa0.54□□□□□ -2.32
LTN1-204ENST00000475344 HAGHLQ6PII5 290 aaPredicted RBP0.54□□□□□ -2.32
LTN1-204ENST00000475344 TMEM14EPQ6UXP3 125 aa0.54□□□□□ -2.32
LTN1-204ENST00000475344 LINC00575Q6W349 94 aa0.54□□□□□ -2.32
LTN1-204ENST00000475344 KRTAP19-3Q7Z4W3 81 aa0.54□□□□□ -2.32
LTN1-204ENST00000475344 LYG2Q86SG7 212 aa0.54□□□□□ -2.32
LTN1-204ENST00000475344 PPTC7Q8NI37 304 aa0.54□□□□□ -2.32
LTN1-204ENST00000475344 MUCL1Q96DR8 90 aa0.54□□□□□ -2.32
LTN1-204ENST00000475344 ZC2HC1AQ96GY0 325 aa0.54□□□□□ -2.32
LTN1-204ENST00000475344 HOPXQ9BPY8 73 aaPredicted RBP0.54□□□□□ -2.32
LTN1-204ENST00000475344 PBDC1Q9BVG4 233 aa0.54□□□□□ -2.32
LTN1-204ENST00000475344 CCDC94Q9BW85 323 aaPredicted RBP0.54□□□□□ -2.32
LTN1-204ENST00000475344 PBOV1Q9GZY1 135 aa0.54□□□□□ -2.32
LTN1-204ENST00000475344 CACYBPQ9HB71 228 aaKnown RBP0.54□□□□□ -2.32
LTN1-204ENST00000475344 TNFSF18Q9UNG2 199 aa0.54□□□□□ -2.32
LTN1-204ENST00000475344 FRAS1Q86XX4 4008 aa0.53□□□□□ -2.32
LTN1-204ENST00000475344 NUP210Q8TEM1 1887 aaPredicted RBP0.53□□□□□ -2.32
LTN1-204ENST00000475344 OR2T8A6NH00 312 aa0.53□□□□□ -2.32
LTN1-204ENST00000475344 TMEM238C9JI98 176 aa0.53□□□□□ -2.32
LTN1-204ENST00000475344 H3BRM9 83 aa0.53□□□□□ -2.32
LTN1-204ENST00000475344 TMED4Q7Z7H5 227 aa0.53□□□□□ -2.32
LTN1-204ENST00000475344 TEN1Q86WV5 123 aa0.53□□□□□ -2.32
LTN1-204ENST00000475344 CARD19Q96LW7 228 aa0.53□□□□□ -2.32
LTN1-204ENST00000475344 HYLS1Q96M11 299 aa0.53□□□□□ -2.32
LTN1-204ENST00000475344 RNF11Q9Y3C5 154 aa0.53□□□□□ -2.32
LTN1-204ENST00000475344 UFC1Q9Y3C8 167 aa0.53□□□□□ -2.32
LTN1-204ENST00000475344 RFX7Q2KHR2 1363 aa0.53□□□□□ -2.32
LTN1-204ENST00000475344 UHRF1BP1Q6BDS2 1440 aa0.53□□□□□ -2.32
LTN1-204ENST00000475344 RER1O15258 196 aa0.52□□□□□ -2.33
LTN1-204ENST00000475344 IFNA14P01570 189 aa0.52□□□□□ -2.33
LTN1-204ENST00000475344 APOA2P02652 100 aa0.52□□□□□ -2.33
LTN1-204ENST00000475344 COX7CP15954 63 aa0.52□□□□□ -2.33
LTN1-204ENST00000475344 G0S2P27469 103 aa0.52□□□□□ -2.33
LTN1-204ENST00000475344 GLRXP35754 106 aa0.52□□□□□ -2.33
LTN1-204ENST00000475344 PPP1R2P41236 205 aa0.52□□□□□ -2.33
LTN1-204ENST00000475344 KLRD1Q13241 179 aa0.52□□□□□ -2.33
LTN1-204ENST00000475344 EIF3IQ13347 325 aaKnown RBP0.52□□□□□ -2.33
LTN1-204ENST00000475344 LTC4SQ16873 150 aa0.52□□□□□ -2.33
LTN1-204ENST00000475344 C1orf140Q5VVS0 124 aa0.52□□□□□ -2.33
LTN1-204ENST00000475344 PPP1R2P3Q6NXS1 205 aa0.52□□□□□ -2.33
LTN1-204ENST00000475344 ARPINQ7Z6K5 226 aa0.52□□□□□ -2.33
LTN1-204ENST00000475344 IFT20Q8IY31 132 aa0.52□□□□□ -2.33
LTN1-204ENST00000475344 MALSU1Q96EH3 234 aa0.52□□□□□ -2.33
LTN1-204ENST00000475344 TMEM138Q9NPI0 162 aa0.52□□□□□ -2.33
LTN1-204ENST00000475344 GID8Q9NWU2 228 aa0.52□□□□□ -2.33
LTN1-204ENST00000475344 EIF3AQ14152 1382 aaKnown RBP0.52□□□□□ -2.33
LTN1-204ENST00000475344 TRAV27A0A087WT01 109 aa0.51□□□□□ -2.33
LTN1-204ENST00000475344 C5orf67F2Z3F1 127 aa0.51□□□□□ -2.33
LTN1-204ENST00000475344 IGLV3-1P01715 115 aa0.51□□□□□ -2.33
LTN1-204ENST00000475344 POU6F1Q14863 301 aa0.51□□□□□ -2.33
LTN1-204ENST00000475344 FKBP1CQ5VVH2 108 aa0.51□□□□□ -2.33
LTN1-204ENST00000475344 CD109Q6YHK3 1445 aa0.51□□□□□ -2.33
LTN1-204ENST00000475344 TRPM1Q7Z4N2 1603 aa0.51□□□□□ -2.33
LTN1-204ENST00000475344 OR5AS1Q8N127 324 aa0.51□□□□□ -2.33
LTN1-204ENST00000475344 ANKRD31Q8N7Z5 1873 aa0.51□□□□□ -2.33
LTN1-204ENST00000475344 NUP35Q8NFH5 326 aa0.51□□□□□ -2.33
LTN1-204ENST00000475344 WFDC10AQ9H1F0 79 aa0.51□□□□□ -2.33
LTN1-204ENST00000475344 HSPB8Q9UJY1 196 aa0.51□□□□□ -2.33
LTN1-204ENST00000475344 OR52A1Q9UKL2 312 aa0.51□□□□□ -2.33
LTN1-204ENST00000475344 FRMPD1Q5SYB0 1578 aa0.5□□□□□ -2.33
LTN1-204ENST00000475344 NCAPD3P42695 1498 aa0.5□□□□□ -2.33
LTN1-204ENST00000475344 hDV103S1A0JD37 113 aa0.5□□□□□ -2.33
LTN1-204ENST00000475344 C9orf170A2RU37 121 aa0.5□□□□□ -2.33
LTN1-204ENST00000475344 HIST1H2BKO60814 126 aa0.5□□□□□ -2.33
LTN1-204ENST00000475344 HIST1H2BJP06899 126 aa0.5□□□□□ -2.33
LTN1-204ENST00000475344 GNG10P50151 68 aa0.5□□□□□ -2.33
LTN1-204ENST00000475344 CRYBA4P53673 196 aa0.5□□□□□ -2.33
LTN1-204ENST00000475344 HBBP68871 147 aa0.5□□□□□ -2.33
LTN1-204ENST00000475344 SPATA8Q6RVD6 105 aa0.5□□□□□ -2.33
LTN1-204ENST00000475344 PHF5AQ7RTV0 110 aaKnown RBP0.5□□□□□ -2.33
LTN1-204ENST00000475344 LRRC18Q8N456 261 aa0.5□□□□□ -2.33
LTN1-204ENST00000475344 OR10AG1Q8NH19 301 aa0.5□□□□□ -2.33
LTN1-204ENST00000475344 PSMF1Q92530 271 aa0.5□□□□□ -2.33
LTN1-204ENST00000475344 PRRT1Q99946 306 aa0.5□□□□□ -2.33
LTN1-204ENST00000475344 OTORQ9NRC9 128 aa0.5□□□□□ -2.33
LTN1-204ENST00000475344 TRAV5A0A0B4J249 113 aa0.49□□□□□ -2.33
LTN1-204ENST00000475344 PPYP01298 95 aa0.49□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms