RNA–Protein interactions for RNA: ENST00000472230.5

GCFC2-208, Transcript of GC-rich sequence DNA-binding factor 2, human

TSL 2

Gene GCFC2, Length 2,265 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GCFC2-208	ENST00000472230	TRAV9-1	A0A075B6T8	112 aa		14.13	□□□□□ -0.15
GCFC2-208	ENST00000472230	CLPSL1	A2RUU4	121 aa		14.13	□□□□□ -0.15
GCFC2-208	ENST00000472230	ZNF207	O43670	478 aa	Known RBP	14.13	□□□□□ -0.15
GCFC2-208	ENST00000472230	LTA	P01374	205 aa		14.13	□□□□□ -0.15
GCFC2-208	ENST00000472230	TYMS	P04818	313 aa		14.13	□□□□□ -0.15
GCFC2-208	ENST00000472230	LCNL1	Q6ZST4	164 aa		14.13	□□□□□ -0.15
GCFC2-208	ENST00000472230	MAP1A	P78559	2803 aa	Predicted RBP	14.12	□□□□□ -0.15
GCFC2-208	ENST00000472230	GATC	O43716	136 aa	Known RBP	14.12	□□□□□ -0.15
GCFC2-208	ENST00000472230	SNRPE	P62304	92 aa	Known RBP	14.12	□□□□□ -0.15
GCFC2-208	ENST00000472230	C1orf194	Q5T5A4	169 aa		14.12	□□□□□ -0.15
GCFC2-208	ENST00000472230	FAM231D	Q6ZW35	169 aa		14.12	□□□□□ -0.15
GCFC2-208	ENST00000472230	PRNT	Q86SH4	94 aa		14.12	□□□□□ -0.15
GCFC2-208	ENST00000472230		Q86TA4	180 aa		14.12	□□□□□ -0.15
GCFC2-208	ENST00000472230	SMAD5-AS1	Q9Y6J3	95 aa		14.12	□□□□□ -0.15
GCFC2-208	ENST00000472230	IGHV3-66	A0A0C4DH42	116 aa		14.12	□□□□□ -0.15
GCFC2-208	ENST00000472230	NDUFA4	O00483	81 aa		14.12	□□□□□ -0.15
GCFC2-208	ENST00000472230	TRBV12-3	P01733	135 aa		14.12	□□□□□ -0.15
GCFC2-208	ENST00000472230	IGHG4	P01861	327 aa		14.12	□□□□□ -0.15
GCFC2-208	ENST00000472230	IL17REL	Q6ZVW7	336 aa		14.12	□□□□□ -0.15
GCFC2-208	ENST00000472230	TMEM75	Q8N9X5	138 aa		14.12	□□□□□ -0.15
GCFC2-208	ENST00000472230	APC	P25054	2843 aa		14.12	□□□□□ -0.15
GCFC2-208	ENST00000472230	CSMD1	Q96PZ7	3565 aa		14.11	□□□□□ -0.15
GCFC2-208	ENST00000472230	TRAV8-1	A0A0A6YYK1	113 aa		14.11	□□□□□ -0.15
GCFC2-208	ENST00000472230	DIRC3	C9JPN6	131 aa		14.11	□□□□□ -0.15
GCFC2-208	ENST00000472230	ZNF253	O75346	499 aa		14.11	□□□□□ -0.15
GCFC2-208	ENST00000472230	RPL19	P84098	196 aa	Known RBP	14.11	□□□□□ -0.15
GCFC2-208	ENST00000472230	SIGLECL1	Q8N7X8	197 aa		14.11	□□□□□ -0.15
GCFC2-208	ENST00000472230	IGHV3OR16-13	A0A075B7E8	117 aa		14.11	□□□□□ -0.15
GCFC2-208	ENST00000472230	IGHV3-74	A0A0B4J1X5	117 aa		14.11	□□□□□ -0.15
GCFC2-208	ENST00000472230	TMEM89	A2RUT3	159 aa		14.11	□□□□□ -0.15
GCFC2-208	ENST00000472230		M0R3E3	92 aa		14.11	□□□□□ -0.15
GCFC2-208	ENST00000472230	SLC35B1	P78383	322 aa		14.11	□□□□□ -0.15
GCFC2-208	ENST00000472230	CELSR1	Q9NYQ6	3014 aa		14.1	□□□□□ -0.15
GCFC2-208	ENST00000472230	IGHV3-49	A0A0A0MS15	119 aa		14.1	□□□□□ -0.15
GCFC2-208	ENST00000472230	TRBV6-1	A0A0K0K1D8	114 aa		14.1	□□□□□ -0.15
GCFC2-208	ENST00000472230	SERTM2	A0A1B0GWG4	89 aa		14.1	□□□□□ -0.15
GCFC2-208	ENST00000472230	FAM209B	Q5JX69	171 aa		14.1	□□□□□ -0.15
GCFC2-208	ENST00000472230	FRZB	Q92765	325 aa		14.1	□□□□□ -0.15
GCFC2-208	ENST00000472230	MLST8	Q9BVC4	326 aa		14.1	□□□□□ -0.15
GCFC2-208	ENST00000472230		A0A087X0K7	114 aa		14.1	□□□□□ -0.15
GCFC2-208	ENST00000472230	APOH	P02749	345 aa	Predicted RBP	14.1	□□□□□ -0.15
GCFC2-208	ENST00000472230	PSMB8	P28062	276 aa		14.1	□□□□□ -0.15
GCFC2-208	ENST00000472230	PSG3	Q16557	428 aa		14.1	□□□□□ -0.15
GCFC2-208	ENST00000472230	NUDT10	Q8NFP7	164 aa		14.1	□□□□□ -0.15
GCFC2-208	ENST00000472230	NUDT11	Q96G61	164 aa		14.1	□□□□□ -0.15
GCFC2-208	ENST00000472230	C5orf52	A6NGY3	159 aa		14.09	□□□□□ -0.15
GCFC2-208	ENST00000472230	TRGC1	P0CF51	173 aa		14.09	□□□□□ -0.15
GCFC2-208	ENST00000472230	TMEM183A	Q8IXX5	376 aa		14.09	□□□□□ -0.15
GCFC2-208	ENST00000472230	ARL6IP6	Q8N6S5	226 aa		14.09	□□□□□ -0.15
GCFC2-208	ENST00000472230	DAZAP1	Q96EP5	407 aa	Known RBP	14.09	□□□□□ -0.15
GCFC2-208	ENST00000472230	ZNF702P	Q9H963	129 aa		14.09	□□□□□ -0.15
GCFC2-208	ENST00000472230	PSG8	Q9UQ74	426 aa		14.09	□□□□□ -0.15
GCFC2-208	ENST00000472230		U3KQE9	123 aa		14.09	□□□□□ -0.15
GCFC2-208	ENST00000472230	HIST1H2BK	O60814	126 aa		14.08	□□□□□ -0.15
GCFC2-208	ENST00000472230	IGLV2-11	P01706	119 aa		14.08	□□□□□ -0.15
GCFC2-208	ENST00000472230	HIST1H2BJ	P06899	126 aa		14.08	□□□□□ -0.15
GCFC2-208	ENST00000472230	HIST1H2BO	P23527	126 aa		14.08	□□□□□ -0.15
GCFC2-208	ENST00000472230	HIST1H2BB	P33778	126 aa		14.08	□□□□□ -0.15
GCFC2-208	ENST00000472230	NDUFA6	P56556	154 aa		14.08	□□□□□ -0.15
GCFC2-208	ENST00000472230	HIST1H2BD	P58876	126 aa		14.08	□□□□□ -0.15
GCFC2-208	ENST00000472230	HIST1H2BC	P62807	126 aa		14.08	□□□□□ -0.15
GCFC2-208	ENST00000472230	HIST2H2BE	Q16778	126 aa		14.08	□□□□□ -0.15
GCFC2-208	ENST00000472230	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	14.08	□□□□□ -0.15
GCFC2-208	ENST00000472230	HIST1H2BH	Q93079	126 aa		14.08	□□□□□ -0.15
GCFC2-208	ENST00000472230	GRAMD2B	Q96HH9	432 aa		14.08	□□□□□ -0.15
GCFC2-208	ENST00000472230	HIST1H2BN	Q99877	126 aa		14.08	□□□□□ -0.15
GCFC2-208	ENST00000472230	HIST1H2BM	Q99879	126 aa		14.08	□□□□□ -0.15
GCFC2-208	ENST00000472230	ZNF331	Q9NQX6	463 aa	Predicted RBP	14.08	□□□□□ -0.15
GCFC2-208	ENST00000472230	SLC50A1	Q9BRV3	221 aa		14.08	□□□□□ -0.16
GCFC2-208	ENST00000472230	PEF1	Q9UBV8	284 aa	Known RBP	14.08	□□□□□ -0.16
GCFC2-208	ENST00000472230	ZFP30	Q9Y2G7	519 aa		14.08	□□□□□ -0.16
GCFC2-208	ENST00000472230	TCL1A	P56279	114 aa		14.07	□□□□□ -0.16
GCFC2-208	ENST00000472230	DUX5	Q96PT3	197 aa		14.07	□□□□□ -0.16
GCFC2-208	ENST00000472230	ZNF492	Q9P255	531 aa		14.07	□□□□□ -0.16
GCFC2-208	ENST00000472230	TRAPPC1	Q9Y5R8	145 aa		14.07	□□□□□ -0.16
GCFC2-208	ENST00000472230	MEOX2	P50222	304 aa		14.07	□□□□□ -0.16
GCFC2-208	ENST00000472230	AKR1D1	P51857	326 aa		14.07	□□□□□ -0.16
GCFC2-208	ENST00000472230	FABP9	Q0Z7S8	132 aa		14.07	□□□□□ -0.16
GCFC2-208	ENST00000472230	ACTL10	Q5JWF8	245 aa		14.07	□□□□□ -0.16
GCFC2-208	ENST00000472230	UNQ9165/PRO28630	Q6UXU0	137 aa		14.07	□□□□□ -0.16
GCFC2-208	ENST00000472230	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		14.07	□□□□□ -0.16
GCFC2-208	ENST00000472230	SMIM27	A0A1W2PRY6	76 aa		14.06	□□□□□ -0.16
GCFC2-208	ENST00000472230	PRB4	P10163	310 aa	Predicted RBP	14.06	□□□□□ -0.16
GCFC2-208	ENST00000472230	C16orf54	Q6UWD8	224 aa		14.06	□□□□□ -0.16
GCFC2-208	ENST00000472230	GBGT1	Q8N5D6	347 aa		14.06	□□□□□ -0.16
GCFC2-208	ENST00000472230	CHEK1	O14757	476 aa		14.06	□□□□□ -0.16
GCFC2-208	ENST00000472230	CA1	P00915	261 aa	Predicted RBP	14.06	□□□□□ -0.16
GCFC2-208	ENST00000472230		P01737	135 aa		14.06	□□□□□ -0.16
GCFC2-208	ENST00000472230	YAE1D1	Q9NRH1	226 aa		14.06	□□□□□ -0.16
GCFC2-208	ENST00000472230		A0A1W2PS18	150 aa		14.05	□□□□□ -0.16
GCFC2-208	ENST00000472230	UBE2C	O00762	179 aa		14.05	□□□□□ -0.16
GCFC2-208	ENST00000472230	CD5L	O43866	347 aa		14.05	□□□□□ -0.16
GCFC2-208	ENST00000472230	IGFL4	Q6B9Z1	124 aa		14.05	□□□□□ -0.16
GCFC2-208	ENST00000472230	C10orf99	Q6UWK7	81 aa		14.05	□□□□□ -0.16
GCFC2-208	ENST00000472230	TMEM86B	Q8N661	226 aa		14.05	□□□□□ -0.16
GCFC2-208	ENST00000472230	FBLL1	A6NHQ2	334 aa	Known RBP	14.04	□□□□□ -0.16
GCFC2-208	ENST00000472230	PHOX2A	O14813	284 aa		14.04	□□□□□ -0.16
GCFC2-208	ENST00000472230	FOXE3	Q13461	319 aa		14.04	□□□□□ -0.16
GCFC2-208	ENST00000472230	RPP21	Q9H633	154 aa	Known RBP	14.04	□□□□□ -0.16
GCFC2-208	ENST00000472230	CREBBP	Q92793	2442 aa		14.04	□□□□□ -0.16

Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms