RNA–Protein interactions for RNA: ENST00000472217.1

USF1-204, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 1,097 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-204ENST00000472217 LINC00305Q7Z4B0 112 aa6.43□□□□□ -1.38
USF1-204ENST00000472217 BAP18Q8IXM2 172 aa6.43□□□□□ -1.38
USF1-204ENST00000472217 LRRC20Q8TCA0 184 aa6.43□□□□□ -1.38
USF1-204ENST00000472217 C2orf50Q96LR7 162 aa6.43□□□□□ -1.38
USF1-204ENST00000472217 NIPSNAP3BQ9BS92 247 aa6.43□□□□□ -1.38
USF1-204ENST00000472217 TMEM208Q9BTX3 173 aa6.43□□□□□ -1.38
USF1-204ENST00000472217 FAM240BA0A1B0GVZ2 78 aa6.42□□□□□ -1.38
USF1-204ENST00000472217 FAM24AA6NFZ4 105 aa6.42□□□□□ -1.38
USF1-204ENST00000472217 BOLA2-SMG1P6H3BVE0 249 aa6.42□□□□□ -1.38
USF1-204ENST00000472217 COX7A2P2O60397 106 aa6.42□□□□□ -1.38
USF1-204ENST00000472217 CST7O76096 145 aa6.42□□□□□ -1.38
USF1-204ENST00000472217 INSP01308 110 aa6.42□□□□□ -1.38
USF1-204ENST00000472217 SNRPCP09234 159 aaKnown RBP6.42□□□□□ -1.38
USF1-204ENST00000472217 CAMLGP49069 296 aa6.42□□□□□ -1.38
USF1-204ENST00000472217 BCAP31P51572 246 aa6.42□□□□□ -1.38
USF1-204ENST00000472217 S100A10P60903 97 aa6.42□□□□□ -1.38
USF1-204ENST00000472217 HIST1H1AQ02539 215 aaPredicted RBP6.42□□□□□ -1.38
USF1-204ENST00000472217 PSG3Q16557 428 aa6.42□□□□□ -1.38
USF1-204ENST00000472217 LCN15Q6UWW0 184 aa6.42□□□□□ -1.38
USF1-204ENST00000472217 LINC00299Q6ZSB3 139 aa6.42□□□□□ -1.38
USF1-204ENST00000472217 BPIFA4PQ86YQ2 179 aa6.42□□□□□ -1.38
USF1-204ENST00000472217 OR8A1Q8NGG7 326 aa6.42□□□□□ -1.38
USF1-204ENST00000472217 TMEM37Q8WXS4 190 aa6.42□□□□□ -1.38
USF1-204ENST00000472217 NDUFAF3Q9BU61 184 aa6.42□□□□□ -1.38
USF1-204ENST00000472217 ZNF331Q9NQX6 463 aaPredicted RBP6.42□□□□□ -1.38
USF1-204ENST00000472217 RNF24Q9Y225 148 aa6.42□□□□□ -1.38
USF1-204ENST00000472217 TRAV12-2A0A075B6T6 113 aa6.41□□□□□ -1.38
USF1-204ENST00000472217 IGSF23A1L1A6 192 aa6.41□□□□□ -1.38
USF1-204ENST00000472217 ZNF705GA8MUZ8 300 aaPredicted RBP6.41□□□□□ -1.38
USF1-204ENST00000472217 H3BTX0 84 aa6.41□□□□□ -1.38
USF1-204ENST00000472217 SLC17A3O00476 420 aa6.41□□□□□ -1.38
USF1-204ENST00000472217 PRM2P04554 102 aa6.41□□□□□ -1.38
USF1-204ENST00000472217 P0DMU3 169 aa6.41□□□□□ -1.38
USF1-204ENST00000472217 FAM231AP0DMU4 169 aa6.41□□□□□ -1.38
USF1-204ENST00000472217 FAM231CP0DMU5 169 aa6.41□□□□□ -1.38
USF1-204ENST00000472217 HTN3P15516 51 aa6.41□□□□□ -1.38
USF1-204ENST00000472217 CXCL2P19875 107 aa6.41□□□□□ -1.38
USF1-204ENST00000472217 PVALBP20472 110 aaPredicted RBP6.41□□□□□ -1.38
USF1-204ENST00000472217 RHOBP62745 196 aa6.41□□□□□ -1.38
USF1-204ENST00000472217 IL15RAQ13261 267 aa6.41□□□□□ -1.38
USF1-204ENST00000472217 ASAH1Q13510 395 aa6.41□□□□□ -1.38
USF1-204ENST00000472217 RAB31Q13636 194 aa6.41□□□□□ -1.38
USF1-204ENST00000472217 RAB32Q13637 225 aa6.41□□□□□ -1.38
USF1-204ENST00000472217 OPCMLQ14982 345 aa6.41□□□□□ -1.38
USF1-204ENST00000472217 OXA1LQ15070 435 aa6.41□□□□□ -1.38
USF1-204ENST00000472217 VWC2Q2TAL6 325 aa6.41□□□□□ -1.38
USF1-204ENST00000472217 C10orf113Q5VZT2 155 aa6.41□□□□□ -1.38
USF1-204ENST00000472217 MIC13Q5XKP0 118 aa6.41□□□□□ -1.38
USF1-204ENST00000472217 MZT2BQ6NZ67 158 aa6.41□□□□□ -1.38
USF1-204ENST00000472217 NRARPQ7Z6K4 114 aa6.41□□□□□ -1.38
USF1-204ENST00000472217 RPUSD4Q96CM3 377 aaKnown RBP6.41□□□□□ -1.38
USF1-204ENST00000472217 LYRM2Q9NU23 88 aaPredicted RBP6.41□□□□□ -1.38
USF1-204ENST00000472217 UQCC1Q9NVA1 299 aa6.41□□□□□ -1.38
USF1-204ENST00000472217 WDR83OSQ9Y284 106 aa6.41□□□□□ -1.38
USF1-204ENST00000472217 UBE2L5PA0A1B0GUS4 154 aa6.4□□□□□ -1.38
USF1-204ENST00000472217 H3BQ15 152 aa6.4□□□□□ -1.38
USF1-204ENST00000472217 AZU1P20160 251 aa6.4□□□□□ -1.38
USF1-204ENST00000472217 SULT1A1P50225 295 aa6.4□□□□□ -1.38
USF1-204ENST00000472217 B2MP61769 119 aa6.4□□□□□ -1.38
USF1-204ENST00000472217 DAD1P61803 113 aa6.4□□□□□ -1.38
USF1-204ENST00000472217 TMEM252Q8N6L7 170 aa6.4□□□□□ -1.38
USF1-204ENST00000472217 POM121L12Q8N7R1 296 aa6.4□□□□□ -1.38
USF1-204ENST00000472217 S100ZQ8WXG8 99 aa6.4□□□□□ -1.38
USF1-204ENST00000472217 FAM210BQ96KR6 192 aa6.4□□□□□ -1.38
USF1-204ENST00000472217 SLC50A1Q9BRV3 221 aa6.4□□□□□ -1.38
USF1-204ENST00000472217 PPP1R14DQ9NXH3 145 aa6.4□□□□□ -1.38
USF1-204ENST00000472217 TRAV5A0A0B4J249 113 aa6.39□□□□□ -1.39
USF1-204ENST00000472217 PLAC8L1A1L4L8 177 aa6.39□□□□□ -1.39
USF1-204ENST00000472217 LYRM9A8MSI8 78 aa6.39□□□□□ -1.39
USF1-204ENST00000472217 PRAC2D3DTV9 90 aa6.39□□□□□ -1.39
USF1-204ENST00000472217 J3QL48 77 aa6.39□□□□□ -1.39
USF1-204ENST00000472217 UPK1BO75841 260 aa6.39□□□□□ -1.39
USF1-204ENST00000472217 IGLC2P0DOY2 106 aa6.39□□□□□ -1.39
USF1-204ENST00000472217 TSPOP30536 169 aa6.39□□□□□ -1.39
USF1-204ENST00000472217 S100A11P31949 105 aa6.39□□□□□ -1.39
USF1-204ENST00000472217 RPL29P47914 159 aaKnown RBP6.39□□□□□ -1.39
USF1-204ENST00000472217 HBG1P69891 147 aa6.39□□□□□ -1.39
USF1-204ENST00000472217 HBG2P69892 147 aa6.39□□□□□ -1.39
USF1-204ENST00000472217 BAXQ07812 192 aa6.39□□□□□ -1.39
USF1-204ENST00000472217 Q6ZRG5 221 aa6.39□□□□□ -1.39
USF1-204ENST00000472217 STX12Q86Y82 276 aa6.39□□□□□ -1.39
USF1-204ENST00000472217 ENKURQ8TC29 256 aa6.39□□□□□ -1.39
USF1-204ENST00000472217 SAT2Q96F10 170 aaPredicted RBP6.39□□□□□ -1.39
USF1-204ENST00000472217 DNAJC4Q9NNZ3 241 aa6.39□□□□□ -1.39
USF1-204ENST00000472217 SLC39A9Q9NUM3 307 aa6.39□□□□□ -1.39
USF1-204ENST00000472217 SIX6O95475 246 aa6.38□□□□□ -1.39
USF1-204ENST00000472217 DEFB130BP0DP73 79 aa6.38□□□□□ -1.39
USF1-204ENST00000472217 DEFB130AP0DP74 79 aa6.38□□□□□ -1.39
USF1-204ENST00000472217 CDKN1BP46527 198 aa6.38□□□□□ -1.39
USF1-204ENST00000472217 TMEM88Q6PEY1 159 aa6.38□□□□□ -1.39
USF1-204ENST00000472217 TMEM256Q8N2U0 113 aa6.38□□□□□ -1.39
USF1-204ENST00000472217 OR1L4Q8NGR5 311 aa6.38□□□□□ -1.39
USF1-204ENST00000472217 LINC01587Q99440 93 aa6.38□□□□□ -1.39
USF1-204ENST00000472217 PFDN5Q99471 154 aa6.38□□□□□ -1.39
USF1-204ENST00000472217 PARD6GQ9BYG4 376 aaPredicted RBP6.38□□□□□ -1.39
USF1-204ENST00000472217 GPN1Q9HCN4 374 aaPredicted RBP6.38□□□□□ -1.39
USF1-204ENST00000472217 PXMP4Q9Y6I8 212 aa6.38□□□□□ -1.39
USF1-204ENST00000472217 KMT2AQ03164 3969 aa6.37□□□□□ -1.39
USF1-204ENST00000472217 A6NHS1 94 aa6.37□□□□□ -1.39
USF1-204ENST00000472217 HTN1P15515 57 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms