RNA–Protein interactions for RNA: ENST00000467553.2

CCHCR1-211, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 589 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-211ENST00000467553 CLINT1Q14677 625 aa10.21□□□□□ -0.77
CCHCR1-211ENST00000467553 FAM78BQ5VT40 261 aa10.21□□□□□ -0.77
CCHCR1-211ENST00000467553 RNF182Q8N6D2 247 aa10.21□□□□□ -0.77
CCHCR1-211ENST00000467553 C1QTNF4Q9BXJ3 329 aa10.21□□□□□ -0.77
CCHCR1-211ENST00000467553 HRH4Q9H3N8 390 aa10.21□□□□□ -0.77
CCHCR1-211ENST00000467553 SLC39A9Q9NUM3 307 aa10.21□□□□□ -0.77
CCHCR1-211ENST00000467553 TRAV8-2A0A0B4J237 113 aa10.2□□□□□ -0.78
CCHCR1-211ENST00000467553 C11orf94C9JXX5 98 aa10.2□□□□□ -0.78
CCHCR1-211ENST00000467553 PET100P0DJ07 73 aa10.2□□□□□ -0.78
CCHCR1-211ENST00000467553 B2MP61769 119 aa10.2□□□□□ -0.78
CCHCR1-211ENST00000467553 OPCMLQ14982 345 aa10.2□□□□□ -0.78
CCHCR1-211ENST00000467553 MORN5Q5VZ52 161 aa10.2□□□□□ -0.78
CCHCR1-211ENST00000467553 SPATA31B1PQ5VZV4 182 aa10.2□□□□□ -0.78
CCHCR1-211ENST00000467553 BPIFA4PQ86YQ2 179 aa10.2□□□□□ -0.78
CCHCR1-211ENST00000467553 THAP6Q8TBB0 222 aa10.2□□□□□ -0.78
CCHCR1-211ENST00000467553 MED28Q9H204 178 aa10.2□□□□□ -0.78
CCHCR1-211ENST00000467553 PXMP4Q9Y6I8 212 aa10.2□□□□□ -0.78
CCHCR1-211ENST00000467553 TRAV5A0A0B4J249 113 aa10.19□□□□□ -0.78
CCHCR1-211ENST00000467553 A0A0J9YX75 114 aa10.19□□□□□ -0.78
CCHCR1-211ENST00000467553 MRPS12O15235 138 aaKnown RBP10.19□□□□□ -0.78
CCHCR1-211ENST00000467553 MPDU1O75352 247 aa10.19□□□□□ -0.78
CCHCR1-211ENST00000467553 CXCL3P19876 107 aa10.19□□□□□ -0.78
CCHCR1-211ENST00000467553 HLA-DMBP28068 263 aa10.19□□□□□ -0.78
CCHCR1-211ENST00000467553 PSG9Q00887 426 aa10.19□□□□□ -0.78
CCHCR1-211ENST00000467553 CSNK1G2-AS1Q8NCQ2 148 aa10.19□□□□□ -0.78
CCHCR1-211ENST00000467553 ZNF738Q8NE65 137 aa10.19□□□□□ -0.78
CCHCR1-211ENST00000467553 C2CD4CQ8TF44 421 aa10.19□□□□□ -0.78
CCHCR1-211ENST00000467553 PFDN5Q99471 154 aa10.19□□□□□ -0.78
CCHCR1-211ENST00000467553 SLC35B3Q9H1N7 401 aa10.19□□□□□ -0.78
CCHCR1-211ENST00000467553 A0A087X0K7 114 aa10.18□□□□□ -0.78
CCHCR1-211ENST00000467553 H3BTX0 84 aa10.18□□□□□ -0.78
CCHCR1-211ENST00000467553 ZNF705DP0CH99 300 aaPredicted RBP10.18□□□□□ -0.78
CCHCR1-211ENST00000467553 ZNF705BP0CI00 300 aaPredicted RBP10.18□□□□□ -0.78
CCHCR1-211ENST00000467553 MIFP14174 115 aa10.18□□□□□ -0.78
CCHCR1-211ENST00000467553 RPL12P30050 165 aaKnown RBP10.18□□□□□ -0.78
CCHCR1-211ENST00000467553 FCN2Q15485 313 aa10.18□□□□□ -0.78
CCHCR1-211ENST00000467553 PSG3Q16557 428 aa10.18□□□□□ -0.78
CCHCR1-211ENST00000467553 ZNF709Q8N972 641 aa10.18□□□□□ -0.78
CCHCR1-211ENST00000467553 CHAC2Q8WUX2 184 aa10.18□□□□□ -0.78
CCHCR1-211ENST00000467553 NPCDR1Q9BY65 106 aa10.18□□□□□ -0.78
CCHCR1-211ENST00000467553 SMIM3Q9BZL3 60 aa10.18□□□□□ -0.78
CCHCR1-211ENST00000467553 MBD2Q9UBB5 411 aa10.18□□□□□ -0.78
CCHCR1-211ENST00000467553 HSPB11Q9Y547 144 aa10.18□□□□□ -0.78
CCHCR1-211ENST00000467553 HECTD4Q9Y4D8 3996 aa10.17□□□□□ -0.78
CCHCR1-211ENST00000467553 IGHV3OR16-12A0A075B7B8 117 aa10.17□□□□□ -0.78
CCHCR1-211ENST00000467553 IGHV4-28A0A0C4DH34 117 aa10.17□□□□□ -0.78
CCHCR1-211ENST00000467553 DUSP14O95147 198 aaKnown RBP10.17□□□□□ -0.78
CCHCR1-211ENST00000467553 PRB4P10163 310 aaPredicted RBP10.17□□□□□ -0.78
CCHCR1-211ENST00000467553 NANOS2P60321 138 aaKnown RBP10.17□□□□□ -0.78
CCHCR1-211ENST00000467553 CLUHP3Q96NS8 147 aa10.17□□□□□ -0.78
CCHCR1-211ENST00000467553 X6R8D5 127 aa10.17□□□□□ -0.78
CCHCR1-211ENST00000467553 ZNF705EA8MWA4 302 aaPredicted RBP10.16□□□□□ -0.78
CCHCR1-211ENST00000467553 RBMY1A1P0DJD3 496 aaKnown RBP10.16□□□□□ -0.78
CCHCR1-211ENST00000467553 RBMY1CP0DJD4 496 aa10.16□□□□□ -0.78
CCHCR1-211ENST00000467553 RBMY1FQ15415 496 aaKnown RBP10.16□□□□□ -0.78
CCHCR1-211ENST00000467553 GCSAMLQ5JQS6 135 aa10.16□□□□□ -0.78
CCHCR1-211ENST00000467553 LCN15Q6UWW0 184 aa10.16□□□□□ -0.78
CCHCR1-211ENST00000467553 OR11H7Q8NGC8 314 aa10.16□□□□□ -0.78
CCHCR1-211ENST00000467553 WDR61Q9GZS3 305 aaKnown RBP10.16□□□□□ -0.78
CCHCR1-211ENST00000467553 C17orf112F2Z3M2 114 aa10.15□□□□□ -0.78
CCHCR1-211ENST00000467553 H3BQ15 152 aa10.15□□□□□ -0.78
CCHCR1-211ENST00000467553 IFNA5P01569 189 aa10.15□□□□□ -0.78
CCHCR1-211ENST00000467553 CNN1P51911 297 aaKnown RBP10.15□□□□□ -0.78
CCHCR1-211ENST00000467553 RHOBP62745 196 aa10.15□□□□□ -0.78
CCHCR1-211ENST00000467553 RGS21Q2M5E4 152 aa10.15□□□□□ -0.78
CCHCR1-211ENST00000467553 Q8NAQ8 132 aa10.15□□□□□ -0.78
CCHCR1-211ENST00000467553 SCGB1C1Q8TD33 95 aa10.15□□□□□ -0.78
CCHCR1-211ENST00000467553 ATP5SQ99766 215 aa10.15□□□□□ -0.78
CCHCR1-211ENST00000467553 SLC50A1Q9BRV3 221 aa10.15□□□□□ -0.78
CCHCR1-211ENST00000467553 ZNF331Q9NQX6 463 aaPredicted RBP10.15□□□□□ -0.78
CCHCR1-211ENST00000467553 PPP1R14DQ9NXH3 145 aa10.15□□□□□ -0.78
CCHCR1-211ENST00000467553 ZNF705FA8MVS1 300 aaPredicted RBP10.14□□□□□ -0.79
CCHCR1-211ENST00000467553 IGLC2P0DOY2 106 aa10.14□□□□□ -0.79
CCHCR1-211ENST00000467553 CXCL2P19875 107 aa10.14□□□□□ -0.79
CCHCR1-211ENST00000467553 HIST1H1AQ02539 215 aaPredicted RBP10.14□□□□□ -0.79
CCHCR1-211ENST00000467553 RPP25LQ8N5L8 163 aaKnown RBP10.14□□□□□ -0.79
CCHCR1-211ENST00000467553 OR8A1Q8NGG7 326 aa10.14□□□□□ -0.79
CCHCR1-211ENST00000467553 RPUSD4Q96CM3 377 aaKnown RBP10.14□□□□□ -0.79
CCHCR1-211ENST00000467553 SLC17A3O00476 420 aa10.13□□□□□ -0.79
CCHCR1-211ENST00000467553 SPINK13Q1W4C9 94 aa10.13□□□□□ -0.79
CCHCR1-211ENST00000467553 AMTNQ6UX39 209 aa10.13□□□□□ -0.79
CCHCR1-211ENST00000467553 SAT2Q96F10 170 aaPredicted RBP10.13□□□□□ -0.79
CCHCR1-211ENST00000467553 WFDC1Q9HC57 220 aa10.13□□□□□ -0.79
CCHCR1-211ENST00000467553 KCNIP2Q9NS61 270 aa10.13□□□□□ -0.79
CCHCR1-211ENST00000467553 ZNF586Q9NXT0 402 aa10.13□□□□□ -0.79
CCHCR1-211ENST00000467553 A8MTW9 85 aa10.12□□□□□ -0.79
CCHCR1-211ENST00000467553 M0R2Z0 102 aa10.12□□□□□ -0.79
CCHCR1-211ENST00000467553 PYYP10082 97 aa10.12□□□□□ -0.79
CCHCR1-211ENST00000467553 GUK1Q16774 197 aa10.12□□□□□ -0.79
CCHCR1-211ENST00000467553 FFAR4Q5NUL3 377 aa10.12□□□□□ -0.79
CCHCR1-211ENST00000467553 ZNF705AQ6ZN79 300 aaPredicted RBP10.12□□□□□ -0.79
CCHCR1-211ENST00000467553 MIR17HGQ75NE6 70 aa10.12□□□□□ -0.79
CCHCR1-211ENST00000467553 BLNKQ8WV28 456 aa10.12□□□□□ -0.79
CCHCR1-211ENST00000467553 TMEM208Q9BTX3 173 aa10.12□□□□□ -0.79
CCHCR1-211ENST00000467553 GOLT1BQ9Y3E0 138 aa10.12□□□□□ -0.79
CCHCR1-211ENST00000467553 TIMM9Q9Y5J7 89 aa10.12□□□□□ -0.79
CCHCR1-211ENST00000467553 TRAV10A0A0B4J240 114 aa10.11□□□□□ -0.79
CCHCR1-211ENST00000467553 IGLL5B9A064 214 aa10.11□□□□□ -0.79
CCHCR1-211ENST00000467553 PRAC2D3DTV9 90 aa10.11□□□□□ -0.79
CCHCR1-211ENST00000467553 AMBPP02760 352 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms